Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 5.2e-164 580.9 273 100.0
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 3.6e-64 249.2 207 55.6
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 1.5e-62 243.8 199 58.3
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 7.5e-62 241.5 196 58.2
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 9.8e-62 241.1 192 58.3
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.3e-61 240.7 198 56.6
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 1.3e-61 240.7 192 55.7
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 2.2e-61 240.0 201 57.7
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 2.9e-61 239.6 198 54.0
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 6.4e-61 238.4 198 56.6
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 6.4e-61 238.4 195 55.4
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 8.3e-61 238.0 200 53.5
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.1e-60 237.7 200 55.5
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 1.4e-60 237.3 200 55.0
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 2.4e-60 236.5 198 54.5
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 7.1e-60 235.0 206 51.9
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 7.1e-60 235.0 193 55.4
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 7.1e-60 235.0 203 55.7
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 1.6e-59 233.8 191 56.0
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 1.6e-59 233.8 193 54.9
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 1.6e-59 233.8 193 57.0
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 2.1e-59 233.4 193 56.0
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 2.7e-59 233.0 196 54.6
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 2.7e-59 233.0 205 55.1
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 2.7e-59 233.0 189 56.6
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 3.5e-59 232.6 199 54.8
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 4.6e-59 232.3 185 55.7
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 4.6e-59 232.3 202 53.5
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 4.6e-59 232.3 195 55.9
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 6.0e-59 231.9 197 55.3
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 6.0e-59 231.9 193 54.4
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 6.0e-59 231.9 194 57.2
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 1.0e-58 231.1 187 56.7
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 1.0e-58 231.1 207 50.2
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 1.7e-58 230.3 196 52.0
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 2.3e-58 229.9 196 53.6
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 3.0e-58 229.6 198 53.5
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 3.0e-58 229.6 194 54.6
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 3.9e-58 229.2 197 54.3
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 5.1e-58 228.8 196 53.1
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 5.1e-58 228.8 208 52.4
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 6.6e-58 228.4 197 53.8
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 8.6e-58 228.0 200 54.5
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 1.1e-57 227.6 200 52.5
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 1.1e-57 227.6 190 53.7
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.5e-57 227.3 197 54.8
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 1.5e-57 227.3 198 52.5
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.5e-57 227.3 203 52.7
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.5e-57 227.3 203 52.7
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 1.5e-57 227.3 204 54.4
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 1.9e-57 226.9 190 52.6
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 1.9e-57 226.9 187 56.7
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 1.9e-57 226.9 192 53.1
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 1.9e-57 226.9 189 54.0
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 2.5e-57 226.5 196 54.6
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 2.5e-57 226.5 192 54.2
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 2.5e-57 226.5 197 53.3
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 3.3e-57 226.1 195 53.8
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 3.3e-57 226.1 203 53.2
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 3.3e-57 226.1 198 54.0
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 4.3e-57 225.7 199 52.3
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 4.3e-57 225.7 197 54.3
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 4.3e-57 225.7 194 54.6
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 4.3e-57 225.7 201 52.7
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 4.3e-57 225.7 198 54.5
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 5.6e-57 225.3 201 51.7
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 7.3e-57 224.9 188 54.3
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 9.5e-57 224.6 192 55.2
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 1.6e-56 223.8 193 53.4
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.6e-56 223.8 191 55.5
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 1.6e-56 223.8 197 53.8
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 2.8e-56 223.0 195 57.4
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 3.6e-56 222.6 195 54.4
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 3.6e-56 222.6 204 51.0
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 4.7e-56 222.2 201 50.2
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 6.2e-56 221.9 193 53.4
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 6.2e-56 221.9 198 52.5
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 6.2e-56 221.9 184 56.0
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 8.1e-56 221.5 196 54.1
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.4e-55 220.7 193 51.8
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.4e-55 220.7 193 51.8
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 1.8e-55 220.3 199 51.8
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.8e-55 220.3 196 50.0
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 1.8e-55 220.3 184 55.4
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 2.3e-55 219.9 186 55.4
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 3.1e-55 219.5 179 54.2
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 3.1e-55 219.5 196 52.6
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 4.0e-55 219.2 201 50.7
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 6.8e-55 218.4 196 50.0
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 6.8e-55 218.4 186 53.8
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 8.9e-55 218.0 192 51.6
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 1.2e-54 217.6 179 55.9
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 1.2e-54 217.6 192 51.6
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 2.0e-54 216.9 200 50.5
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 3.4e-54 216.1 193 51.3
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 9.9e-54 214.5 203 48.8
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 2.2e-53 213.4 180 54.4
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 2.2e-53 213.4 180 53.3
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 2.9e-53 213.0 197 50.3
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 8.3e-53 211.5 192 52.6
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 7.1e-52 208.4 186 53.8
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 4.6e-51 205.7 188 52.1
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 4.6e-51 205.7 188 52.1
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 4.3e-49 199.1 189 51.3
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.4e-44 184.1 201 44.8
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 1.8e-39 167.2 193 45.6
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 6.9e-39 165.2 162 50.6
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.0e-38 163.7 164 48.8
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.0e-38 163.7 164 48.8
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 1.4e-36 157.5 186 44.6
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 5.4e-36 155.6 176 45.5
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 2.7e-35 153.3 148 50.0
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 3.5e-35 152.9 153 48.4
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 8.7e-34 148.3 133 51.1
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 5.4e-28 129.0 68 66.2
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 2.1e-27 127.1 89 58.4
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 2.7e-11 73.6 159 33.3


User provided reference genes

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