Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3181 Chara braunii HOM05D004815 ORTHO05D005742 0.0e+00 1359.7 766 100.0
Mapoly0047s0037 Marchantia polymorpha HOM05D004815 ORTHO05D005742 4.0e-28 131.0 766 23.4
Pp3c20_6130 Physcomitrium patens HOM05D004815 ORTHO05D005742 4.4e-27 127.5 204 37.7
SMO147G0187 Selaginella moellendorffii HOM05D004815 ORTHO05D005742 5.8e-27 127.1 262 35.1
AagrBONN_evm.TU.Sc2ySwM_228.5506 Anthoceros agrestis HOM05D004815 ORTHO05D005742 1.7e-26 125.6 203 35.5
HanXRQChr06g0169351 Helianthus annuus HOM05D004815 ORTHO05D005742 6.0e-24 117.1 204 33.8
ECA236G5005 Erigeron canadensis HOM05D004815 ORTHO05D005742 5.1e-23 114.0 204 31.4
Medtr8g033040 Medicago truncatula HOM05D004815 ORTHO05D005742 5.1e-23 114.0 201 34.3
Sed0004795 Sechium edule HOM05D004815 ORTHO05D005742 1.1e-22 112.8 162 40.1
HanXRQChr04g0121731 Helianthus annuus HOM05D004815 ORTHO05D005742 1.5e-22 112.5 201 32.3
TAR629G0568 Trochodendron aralioides HOM05D004815 ORTHO05D005742 2.5e-22 111.7 200 33.5
Nn1g01309 Nelumbo nucifera HOM05D004815 ORTHO05D005742 5.6e-22 110.5 233 30.9
arahy.Tifrunner.gnm1.ann1.GZV6IQ Arachis hypogaea HOM05D004815 ORTHO05D005742 7.3e-22 110.2 209 32.5
Ca_23774_v3 Cicer arietinum L. HOM05D004815 ORTHO05D005742 7.3e-22 110.2 201 32.3
TPR.G17395 Trifolium pratense HOM05D004815 ORTHO05D005742 7.3e-22 110.2 201 31.8
arahy.Tifrunner.gnm1.ann1.32Q5MD Arachis hypogaea HOM05D004815 ORTHO05D005742 9.6e-22 109.8 209 32.5
Psat4g200880 Pisum sativum HOM05D004815 ORTHO05D005742 9.6e-22 109.8 201 33.3
TAR636G2513 Trochodendron aralioides HOM05D004815 ORTHO05D005742 9.6e-22 109.8 200 33.0
MSTRG.20784 Avicennia marina HOM05D004815 ORTHO05D005742 1.3e-21 109.4 202 30.7
TWI23G0970 Tripterygium wilfordii HOM05D004815 ORTHO05D005742 1.3e-21 109.4 200 32.0
CANSAT56G0719 Cannabis sativa HOM05D004815 ORTHO05D005742 2.1e-21 108.6 201 31.8
RcHm_v2.0_Chr1g0351921 Rosa chinensis HOM05D004815 ORTHO05D005742 2.1e-21 108.6 201 31.8
Lj3g0020425 Lotus japonicus HOM05D004815 ORTHO05D005742 3.6e-21 107.8 247 31.2
VMungo0331G0142 Vigna mungo HOM05D004815 ORTHO05D005742 3.6e-21 107.8 203 32.5
MELO3C022521.2 Cucumis melo HOM05D004815 ORTHO05D005742 6.2e-21 107.1 162 38.3
TPR.G17590 Trifolium pratense HOM05D004815 ORTHO05D005742 6.2e-21 107.1 198 32.3
CiPaw.01G257600 Carya illinoinensis HOM05D004815 ORTHO05D005742 8.1e-21 106.7 202 32.7
MBI04_g28567_MAGBIO Magnolia biondii HOM05D004815 ORTHO05D005742 8.1e-21 106.7 200 32.5
CsaV3_6G005940 Cucumis sativus L. HOM05D004815 ORTHO05D005742 1.1e-20 106.3 162 37.7
FAN01G1324 Fragaria x ananassa HOM05D004815 ORTHO05D005742 1.4e-20 105.9 258 27.9
Lsat_1_v5_gn_7_8041 Lactuca sativa HOM05D004815 ORTHO05D005742 1.4e-20 105.9 268 29.1
FAN06G3277 Fragaria x ananassa HOM05D004815 ORTHO05D005742 1.8e-20 105.5 258 27.5
FAN06G3416 Fragaria x ananassa HOM05D004815 ORTHO05D005742 1.8e-20 105.5 258 27.5
unitig_749.g14360 Utricularia gibba HOM05D003518 ORTHO05D005164 1.8e-20 105.5 201 30.3
HPP92_004960 Vanilla planifolia HOM05D004815 ORTHO05D005742 1.8e-20 105.5 200 31.5
ATR0757G223 Amborella trichopoda HOM05D004815 ORTHO05D005742 2.4e-20 105.1 208 30.8
Duzib138G1778 Durio zibethinus HOM05D004815 ORTHO05D005742 2.4e-20 105.1 159 42.1
Sed0027777 Sechium edule HOM05D004815 ORTHO05D005742 2.4e-20 105.1 162 37.7
BcaB02g09018 Brassica carinata HOM05D004815 ORTHO05D005742 3.1e-20 104.8 205 29.8
Duzib133G0793 Durio zibethinus HOM05D004815 ORTHO05D005742 3.1e-20 104.8 200 32.5
MD02G1195800 Malus domestica HOM05D004815 ORTHO05D005742 3.1e-20 104.8 201 29.4
FAN10G2694 Fragaria x ananassa HOM05D004815 ORTHO05D005742 5.3e-20 104.0 258 27.5
Manes.05G040900 Manihot esculenta HOM05D004815 ORTHO05D005742 5.3e-20 104.0 200 31.5
Solyc01g091900.3 Solanum lycopersicum HOM05D004815 ORTHO05D005742 5.3e-20 104.0 200 31.0
Aqoxy7G00483 Aquilegia oxysepala HOM05D004815 ORTHO05D005742 6.9e-20 103.6 247 31.2
COL.COLO4_12639 Corchorus olitorius HOM05D004815 ORTHO05D005742 6.9e-20 103.6 206 31.6
TWI59G0538 Tripterygium wilfordii HOM05D004815 ORTHO05D005742 6.9e-20 103.6 200 30.5
Atru.chr5.381_Atru.chr5.382 Acer truncatum HOM05D004815 ORTHO05D005742 9.0e-20 103.2 200 31.0
SGA_v2.0_scaffold153G37057 Striga asiatica HOM05D004815 ORTHO05D005742 9.0e-20 103.2 204 29.4
GSVIVG01027589001 Vitis vinifera HOM05D004815 ORTHO05D005742 9.0e-20 103.2 159 35.8
Cfa001810 Carpinus fangiana HOM05D004815 ORTHO05D005742 1.2e-19 102.8 207 30.9
Haze_16704 Corylus avellana HOM05D004815 ORTHO05D005742 1.2e-19 102.8 207 30.9
Glyma.03G018700 Glycine max HOM05D004815 ORTHO05D005742 1.2e-19 102.8 266 30.5
Dinv43746 Davidia involucrata HOM05D004815 ORTHO05D005742 1.5e-19 102.4 203 31.5
Lj7C524T7 Lonicera japonica HOM05D004815 ORTHO05D005742 1.5e-19 102.4 207 30.9
BcaC02g12192 Brassica carinata HOM05D004815 ORTHO05D005742 2.0e-19 102.1 179 36.9
PSO478G4379 Papaver somniferum HOM05D004815 ORTHO05D005742 2.0e-19 102.1 162 36.4
BolC4t22283H Brassica oleracea HOM05D004815 ORTHO05D005742 3.4e-19 101.3 179 36.9
ClCG06G000170 Citrullus lanatus HOM05D004815 ORTHO05D005742 3.4e-19 101.3 200 31.0
PSO782G2788 Papaver somniferum HOM05D004815 ORTHO05D005742 3.4e-19 101.3 162 36.4
Zm00001eb208530 Zea mays HOM05D004815 ORTHO05D005742 3.4e-19 101.3 246 30.5
Cpa.g.sc18.178 Carica papaya HOM05D004815 ORTHO05D005742 4.5e-19 100.9 159 38.4
Gohir.A07G144600 Gossypium hirsutum HOM05D004815 ORTHO05D005742 4.5e-19 100.9 159 40.9
Gohir.D07G150500 Gossypium hirsutum HOM05D004815 ORTHO05D005742 4.5e-19 100.9 159 40.3
Gorai.001G172600 Gossypium raimondii HOM05D004815 ORTHO05D005742 4.5e-19 100.9 159 40.3
Potri.014G078300 Populus trichocarpa HOM05D004815 ORTHO05D005742 4.5e-19 100.9 200 31.0
Sp4g27730 Schrenkiella parvula HOM05D004815 ORTHO05D005742 4.5e-19 100.9 179 37.4
Thecc.01G370200 Theobroma cacao HOM05D004815 ORTHO05D005742 4.5e-19 100.9 162 38.3
Actinidia31455 Actinidia chinensis HOM05D004815 ORTHO05D005742 5.8e-19 100.5 212 29.7
AUR62033376 Chenopodium quinoa HOM05D004815 ORTHO05D005742 5.8e-19 100.5 162 35.2
Ciclev10020702m.g Citrus clementina HOM05D004815 ORTHO05D005742 5.8e-19 100.5 200 30.5
Cc02_g37080 Coffea canephora HOM05D004815 ORTHO05D005742 5.8e-19 100.5 196 29.6
Lalb_Chr17g0340041 Lupinus albus HOM05D004815 ORTHO05D005742 5.8e-19 100.5 207 31.9
Potri.002G152300 Populus trichocarpa HOM05D004815 ORTHO05D005742 5.8e-19 100.5 200 30.0
Carub.0004s2834 Capsella rubella HOM05D004815 ORTHO05D005742 7.6e-19 100.1 179 36.9
Thhalv10001499m.g Eutrema salsugineum HOM05D004815 ORTHO05D005742 7.6e-19 100.1 179 36.3
Aa31LG1G27160 Aethionema arabicum HOM05D004815 ORTHO05D005742 9.9e-19 99.8 160 39.4
EL10Ac1g00976 Beta vulgaris HOM05D004815 ORTHO05D005742 9.9e-19 99.8 162 37.0
PRCOL_00005618 Prasinoderma coloniale HOM05D004815 ORTHO05D005742 9.9e-19 99.8 230 33.5
Sc02g0002260 Simmondsia chinensis HOM05D004815 ORTHO05D005742 9.9e-19 99.8 218 29.8
BraA03t11735Z Brassica rapa HOM05D004815 ORTHO05D005742 1.3e-18 99.4 179 36.3
SEGI_15318 Sequoiadendron giganteum HOM05D004815 ORTHO05D005742 1.3e-18 99.4 238 32.4
BcaB01g03258 Brassica carinata HOM05D004815 ORTHO05D005742 1.7e-18 99.0 205 27.3
CAN.G170.62 Capsicum annuum HOM05D004815 ORTHO05D005742 1.7e-18 99.0 162 34.6
Eucgr.D02393 Eucalyptus grandis HOM05D004815 ORTHO05D005742 1.7e-18 99.0 182 33.5
PGR031G2979 Punica granatum HOM05D004815 ORTHO05D005742 1.7e-18 99.0 162 37.0
Manes.01G263200 Manihot esculenta HOM05D004815 ORTHO05D005742 2.2e-18 98.6 200 29.5
A05p05650 Brassica napus HOM05D004815 ORTHO05D005742 2.9e-18 98.2 179 35.8
BraA05t19537Z Brassica rapa HOM05D004815 ORTHO05D005742 2.9e-18 98.2 179 35.8
Cc09_g02920 Coffea canephora HOM05D004815 ORTHO05D005742 2.9e-18 98.2 200 29.5
AL4G44860 Arabidopsis lyrata HOM05D004815 ORTHO05D005742 3.8e-18 97.8 204 28.9
AT2G45690 Arabidopsis thaliana HOM05D004815 ORTHO05D005742 3.8e-18 97.8 204 28.9
A03p25310 Brassica napus HOM05D004815 ORTHO05D005742 3.8e-18 97.8 179 36.3
Lalb_Chr19g0127171 Lupinus albus HOM05D004815 ORTHO05D005742 3.8e-18 97.8 159 33.3
BcaC01g05112 Brassica carinata HOM05D004815 ORTHO05D005742 4.9e-18 97.4 179 36.3
C03p30200 Brassica napus HOM05D004815 ORTHO05D005742 4.9e-18 97.4 179 36.3
BolC3t15369H Brassica oleracea HOM05D004815 ORTHO05D005742 4.9e-18 97.4 179 36.3
Glyma.07G080200 Glycine max HOM05D004815 ORTHO05D005742 4.9e-18 97.4 159 39.0
Sopen01g037670 Solanum pennellii HOM05D004815 ORTHO05D005742 4.9e-18 97.4 162 34.0
AUR62004281 Chenopodium quinoa HOM05D004815 ORTHO05D005742 6.4e-18 97.1 162 34.0
Lalb_Chr10g0097591 Lupinus albus HOM05D004815 ORTHO05D005742 6.4e-18 97.1 201 28.4
Peaxi162Scf00021g00232 Petunia axillaris HOM05D004815 ORTHO05D005742 6.4e-18 97.1 162 34.0
Prupe.2G152800 Prunus persica HOM05D004815 ORTHO05D005742 8.4e-18 96.7 162 40.1
Migut.B01673 Erythranthe guttata HOM05D004815 ORTHO05D005742 1.1e-17 96.3 182 34.1
Sopen06g030930 Solanum pennellii HOM05D004815 ORTHO05D005742 1.1e-17 96.3 205 29.3
PGSC0003DMG400000005 Solanum tuberosum HOM05D004815 ORTHO05D005742 1.1e-17 96.3 212 30.2
Actinidia09581 Actinidia chinensis HOM05D004815 ORTHO05D005742 1.4e-17 95.9 157 36.3
C04p06610 Brassica napus HOM05D004815 ORTHO05D005742 1.4e-17 95.9 204 26.5
Phvul.010G089200 Phaseolus vulgaris HOM05D004815 ORTHO05D005742 1.4e-17 95.9 159 38.4
QL08p050919 Quercus lobata HOM05D004815 ORTHO05D005742 1.4e-17 95.9 161 37.9
ATR0757G181 Amborella trichopoda HOM05D004815 ORTHO05D005742 1.9e-17 95.5 162 36.4
CDE11G0585 Ceratophyllum demersum HOM05D004815 ORTHO05D005742 1.9e-17 95.5 196 30.1
Rhsim07G0022400 Rhododendron simsii HOM05D004815 ORTHO05D005742 3.2e-17 94.7 213 29.1
Nitab4.5_0013229g0020 Nicotiana tabacum HOM05D004815 ORTHO05D005742 4.2e-17 94.4 162 32.7
Solyc06g074460.4 Solanum lycopersicum HOM05D004815 ORTHO05D005742 4.2e-17 94.4 205 29.3
Nitab4.5_0001901g0030 Nicotiana tabacum HOM05D004815 ORTHO05D005742 7.1e-17 93.6 162 34.6
THA.LOC104817269 Tarenaya hassleriana HOM05D004815 ORTHO05D005742 7.1e-17 93.6 204 29.4
DCAR_006900 Daucus carota HOM05D004815 ORTHO05D005742 9.3e-17 93.2 159 35.2
Oeu059223.1 Olea europaea HOM05D003859 ORTHO05D004927 1.6e-16 92.4 162 34.6
Sabra02G0120600 Salix brachista HOM05D004815 ORTHO05D005742 1.6e-16 92.4 162 37.7
CDE11G0368 Ceratophyllum demersum HOM05D004815 ORTHO05D005742 2.1e-16 92.0 162 34.0
MD02G1195700 Malus domestica HOM05D004815 ORTHO05D005742 2.1e-16 92.0 278 28.4
Os02g0123200 Oryza sativa ssp. japonica HOM05D004815 ORTHO05D005742 2.1e-16 92.0 168 34.5
Hund27330 Selenicereus undatus HOM05D004815 ORTHO05D005742 2.1e-16 92.0 217 28.1
AagrBONN_evm.TU.Sc2ySwM_369.172 Anthoceros agrestis HOM05D004815 ORTHO05D005742 3.5e-16 91.3 209 29.7
CAN.G919.13 Capsicum annuum HOM05D004815 ORTHO05D005742 3.5e-16 91.3 208 27.9
FvH4_7g12840 Fragaria vesca HOM05D004815 ORTHO05D005742 4.6e-16 90.9 162 39.5
Ah.15g094120 Amaranthus hybridus HOM05D001215 ORTHO05D001387 6.0e-16 90.5 212 28.8
Lalb_Chr01g0021231 Lupinus albus HOM05D004815 ORTHO05D005742 6.0e-16 90.5 159 34.6
SalBow7G0216 Salvia bowleyana HOM05D004815 ORTHO05D005742 7.9e-16 90.1 162 34.0
FAN10G0991 Fragaria x ananassa HOM05D004815 ORTHO05D005742 1.3e-15 89.4 176 29.5
Peaxi162Scf00114g00211 Petunia axillaris HOM05D004815 ORTHO05D005742 1.3e-15 89.4 162 34.0
Sabra14G0053800 Salix brachista HOM05D004815 ORTHO05D005742 3.0e-15 88.2 271 29.5
Nitab4.5_0005459g0020 Nicotiana tabacum HOM05D004815 ORTHO05D005742 5.1e-15 87.4 166 34.9
vmacro13348 Vaccinium macrocarpon HOM05D004815 ORTHO05D005742 4.3e-14 84.3 138 38.4
Ciclev10023945m.g Citrus clementina HOM05D004815 ORTHO05D005742 5.6e-14 84.0 159 34.0
Eucgr.D02410 Eucalyptus grandis HOM05D004815 ORTHO05D005742 2.8e-13 81.6 162 32.7
SHI13492 Sapria himalayana HOM05D004815 ORTHO05D005742 2.8e-13 81.6 218 28.9
Gohir.A11G084200 Gossypium hirsutum HOM05D004815 ORTHO05D005742 9.0e-12 76.6 203 27.1
Nitab4.5_0001127g0010 Nicotiana tabacum HOM05D004815 ORTHO05D005742 4.5e-11 74.3 62 51.6
Eucgr.D02397 Eucalyptus grandis HOM05D004815 ORTHO05D005742 2.2e-10 72.0 189 26.5
Dinv32412 Davidia involucrata HOM05D004815 ORTHO05D005742 5.5e-09 67.4 57 49.1
CARHR140910 Cardamine hirsuta HOM05D004815 ORTHO05D005742 9.3e-09 66.6 138 34.1
Glyma.04G148600 Glycine max HOM05D004815 ORTHO05D005742 1.6e-08 65.9 72 44.4
Cre11.g467758 Chlamydomonas reinhardtii HOM05D057976 ORTHO05D044158 4.6e-08 64.3 224 26.3
PGSC0003DMG400007146 Solanum tuberosum HOM05D004815 ORTHO05D005742 2.5e-06 58.5 101 35.6


User provided reference genes

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