Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 1.1e-162 576.6 291 100.0
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 3.0e-40 169.9 128 62.5
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 2.5e-39 166.8 144 57.6
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 7.3e-39 165.2 130 63.1
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 1.2e-38 164.5 126 63.5
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 2.8e-38 163.3 134 59.7
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 4.7e-38 162.5 225 43.1
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 1.1e-37 161.4 126 61.9
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 5.2e-37 159.1 162 51.9
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 1.2e-36 157.9 139 55.4
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 1.5e-36 157.5 135 58.5
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 1.5e-36 157.5 150 53.3
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 1.5e-36 157.5 125 60.8
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 2.0e-36 157.1 126 59.5
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 2.0e-36 157.1 118 61.9
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 2.0e-36 157.1 124 62.1
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 2.0e-36 157.1 125 60.0
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 2.6e-36 156.8 124 62.1
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 4.4e-36 156.0 126 61.1
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 4.4e-36 156.0 125 59.2
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 4.4e-36 156.0 140 55.0
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 4.4e-36 156.0 122 60.7
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 7.6e-36 155.2 136 55.9
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 7.6e-36 155.2 134 59.7
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 9.9e-36 154.8 148 53.4
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 9.9e-36 154.8 139 54.0
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 9.9e-36 154.8 119 61.3
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 1.3e-35 154.5 118 61.9
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 1.7e-35 154.1 139 54.0
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 2.2e-35 153.7 129 55.8
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 2.2e-35 153.7 143 54.5
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 2.2e-35 153.7 127 61.4
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 2.2e-35 153.7 132 58.3
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 2.2e-35 153.7 158 52.5
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 2.9e-35 153.3 122 60.7
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 2.9e-35 153.3 139 53.2
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 2.9e-35 153.3 139 55.4
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 2.9e-35 153.3 122 60.7
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 2.9e-35 153.3 122 60.7
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 2.9e-35 153.3 122 60.7
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 3.8e-35 152.9 142 52.8
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 3.8e-35 152.9 160 51.9
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 3.8e-35 152.9 119 63.9
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 3.8e-35 152.9 140 55.7
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 4.9e-35 152.5 131 56.5
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 4.9e-35 152.5 126 58.7
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 4.9e-35 152.5 119 60.5
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 4.9e-35 152.5 139 54.0
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 4.9e-35 152.5 124 59.7
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 4.9e-35 152.5 139 54.7
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 6.4e-35 152.1 131 58.0
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 8.4e-35 151.8 119 61.3
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 1.1e-34 151.4 132 55.3
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 1.1e-34 151.4 119 58.8
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.1e-34 151.4 129 58.9
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.1e-34 151.4 129 58.9
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 1.1e-34 151.4 128 57.0
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 1.1e-34 151.4 141 53.9
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 1.1e-34 151.4 119 59.7
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 1.4e-34 151.0 119 60.5
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 1.4e-34 151.0 159 49.1
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 1.9e-34 150.6 147 51.7
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 1.9e-34 150.6 121 59.5
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 2.4e-34 150.2 129 58.1
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 2.4e-34 150.2 122 59.8
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 2.4e-34 150.2 142 52.1
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 3.2e-34 149.8 126 57.1
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 3.2e-34 149.8 126 57.1
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 3.2e-34 149.8 147 51.7
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 3.2e-34 149.8 122 59.8
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 3.2e-34 149.8 145 53.8
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 3.2e-34 149.8 131 57.3
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 3.2e-34 149.8 154 49.4
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 4.2e-34 149.4 119 60.5
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 4.2e-34 149.4 134 53.7
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 4.2e-34 149.4 133 54.1
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 4.2e-34 149.4 124 58.1
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 5.4e-34 149.1 119 59.7
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 5.4e-34 149.1 129 56.6
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 9.3e-34 148.3 130 55.4
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 9.3e-34 148.3 119 58.0
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 9.3e-34 148.3 146 52.1
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 1.2e-33 147.9 119 58.8
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 1.2e-33 147.9 119 58.0
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 1.6e-33 147.5 134 53.7
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 2.1e-33 147.1 124 58.9
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 2.1e-33 147.1 138 53.6
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 4.6e-33 146.0 119 58.0
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 4.6e-33 146.0 170 52.4
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 6.0e-33 145.6 122 59.0
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 1.0e-32 144.8 132 54.5
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 1.3e-32 144.4 134 52.2
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 1.3e-32 144.4 134 52.2
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 1.3e-32 144.4 153 52.9
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 1.3e-32 144.4 137 54.0
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 1.3e-32 144.4 151 51.7
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 3.0e-32 143.3 119 58.8
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 5.1e-32 142.5 160 48.1
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 5.6e-31 139.0 158 48.1
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 3.6e-30 136.3 106 60.4
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 6.2e-30 135.6 134 53.0
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 1.1e-29 134.8 134 52.2
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 5.3e-29 132.5 99 61.6
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 7.6e-28 128.6 184 41.3
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 2.4e-26 123.6 160 44.4
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 3.2e-26 123.2 144 46.5
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 4.8e-22 109.4 144 39.6
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 4.6e-17 92.8 118 44.1
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 1.9e-15 87.4 61 70.5
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 1.3e-14 84.7 118 43.2
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 3.4e-12 76.6 71 47.9
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 7.9e-09 65.5 90 42.2


User provided reference genes

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