Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 0.0e+00 1472.6 822 100.0
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 2.0e-65 255.0 441 35.8
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.6e-57 228.0 436 34.2
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 6.4e-56 223.4 445 31.7
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.7e-54 218.0 678 26.7
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.7e-53 215.3 429 33.1
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 1.2e-46 192.6 453 29.8
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.9e-44 185.3 436 29.6
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.4e-40 170.2 442 29.4
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.3e-37 161.8 443 29.6
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.0e-37 161.4 440 28.6
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.6e-27 129.0 637 22.0
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 1.7e-24 119.0 164 40.2
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 1.7e-24 119.0 156 40.4
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 2.9e-24 118.2 164 39.0
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 2.9e-24 118.2 164 39.0
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 4.9e-24 117.5 184 36.4
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 4.9e-24 117.5 208 38.5
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 6.5e-24 117.1 165 37.6
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 2.5e-23 115.2 182 37.4
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 3.2e-23 114.8 189 32.8
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 5.5e-23 114.0 180 37.2
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 5.5e-23 114.0 165 38.8
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 1.6e-22 112.5 196 36.7
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 1.6e-22 112.5 163 36.2
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 2.1e-22 112.1 192 34.9
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 3.5e-22 111.3 196 36.2
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 3.5e-22 111.3 196 36.2
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 4.6e-22 110.9 151 38.4
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 6.0e-22 110.5 179 36.3
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 6.0e-22 110.5 182 35.7
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 7.9e-22 110.2 163 35.6
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 1.8e-21 109.0 179 38.5
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 2.3e-21 108.6 159 38.4
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 2.3e-21 108.6 184 37.0
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 3.0e-21 108.2 158 37.3
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 3.9e-21 107.8 163 34.4
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 3.9e-21 107.8 175 34.3
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 5.1e-21 107.5 162 35.8
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 6.7e-21 107.1 159 39.0
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 6.7e-21 107.1 162 36.4
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 6.7e-21 107.1 191 34.0
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 6.7e-21 107.1 162 36.4
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 1.1e-20 106.3 182 39.0
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 1.1e-20 106.3 163 34.4
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 1.5e-20 105.9 158 39.9
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 1.5e-20 105.9 162 35.2
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 1.5e-20 105.9 160 35.0
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 1.9e-20 105.5 182 34.6
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 1.9e-20 105.5 182 34.1
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 1.9e-20 105.5 162 35.2
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 1.9e-20 105.5 162 35.8
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 2.5e-20 105.1 162 35.8
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 3.3e-20 104.8 182 38.5
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 4.3e-20 104.4 204 33.8
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 4.3e-20 104.4 171 36.3
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 5.7e-20 104.0 201 34.3
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 5.7e-20 104.0 182 34.6
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 5.7e-20 104.0 164 36.6
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 7.4e-20 103.6 171 39.2
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 7.4e-20 103.6 170 37.6
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 9.6e-20 103.2 175 36.0
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 9.6e-20 103.2 185 35.7
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 9.6e-20 103.2 162 34.0
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 9.6e-20 103.2 181 34.8
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 1.3e-19 102.8 162 35.2
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 1.3e-19 102.8 162 33.3
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 1.3e-19 102.8 184 34.2
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 1.3e-19 102.8 160 34.4
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 1.6e-19 102.4 158 39.2
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 1.6e-19 102.4 182 35.2
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 2.1e-19 102.1 169 33.1
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 2.8e-19 101.7 194 33.5
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 3.7e-19 101.3 169 34.9
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 3.7e-19 101.3 151 38.4
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 4.8e-19 100.9 151 37.7
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 4.8e-19 100.9 181 34.8
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 6.2e-19 100.5 175 37.7
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 6.2e-19 100.5 163 35.6
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 6.2e-19 100.5 178 36.5
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 8.2e-19 100.1 175 37.7
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 8.2e-19 100.1 175 37.7
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 8.2e-19 100.1 175 38.3
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 8.2e-19 100.1 163 34.4
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 8.2e-19 100.1 175 37.1
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 1.1e-18 99.8 189 32.3
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 1.1e-18 99.8 181 34.3
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 1.1e-18 99.8 164 34.1
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 1.4e-18 99.4 151 36.4
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 1.8e-18 99.0 182 37.4
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 1.8e-18 99.0 179 37.4
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 1.8e-18 99.0 179 34.1
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 1.8e-18 99.0 163 36.2
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 1.8e-18 99.0 182 33.0
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 2.4e-18 98.6 182 34.1
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 3.1e-18 98.2 182 32.4
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 3.1e-18 98.2 182 32.4
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 4.1e-18 97.8 178 36.5
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 5.3e-18 97.4 175 37.7
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 5.3e-18 97.4 182 36.3
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 6.9e-18 97.1 182 35.7
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 6.9e-18 97.1 175 37.7
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 6.9e-18 97.1 182 31.9
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 9.0e-18 96.7 175 36.0
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 1.2e-17 96.3 151 35.8
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 1.5e-17 95.9 182 37.4
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 1.5e-17 95.9 151 35.8
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 4.5e-17 94.4 182 33.0
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 8.4e-16 90.1 171 33.9
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 1.4e-15 89.4 183 37.2
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 1.4e-15 89.4 126 35.7
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 2.5e-15 88.6 183 37.2
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 6.1e-14 84.0 182 34.6
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 1.3e-13 82.8 166 33.7
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 1.8e-13 82.4 206 29.1
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 3.0e-13 81.6 193 29.5
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 4.3e-12 77.8 231 29.9
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 7.4e-12 77.0 110 40.0
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 2.6e-09 68.6 111 42.3
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 1.9e-07 62.4 185 32.4


User provided reference genes

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