Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 1.6e-296 1021.9 496 100.0
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 2.4e-29 134.4 158 47.5
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 5.2e-29 133.3 149 47.7
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 6.9e-29 132.9 142 46.5
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 2.0e-28 131.3 150 48.0
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 2.0e-28 131.3 149 47.0
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 4.4e-28 130.2 150 44.0
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 7.6e-28 129.4 147 46.9
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 9.9e-28 129.0 150 46.0
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 9.9e-28 129.0 150 44.7
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 2.2e-27 127.9 150 43.3
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 2.9e-27 127.5 150 44.7
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 2.9e-27 127.5 150 46.0
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 6.4e-27 126.3 146 44.5
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 8.4e-27 125.9 150 45.3
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 1.1e-26 125.6 146 44.5
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 1.9e-26 124.8 150 45.3
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 2.4e-26 124.4 146 44.5
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 2.4e-26 124.4 146 43.8
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 2.4e-26 124.4 150 42.7
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 4.2e-26 123.6 146 43.8
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 7.1e-26 122.9 152 45.4
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 7.1e-26 122.9 150 44.0
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 7.1e-26 122.9 146 43.8
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 7.1e-26 122.9 219 37.4
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 7.1e-26 122.9 154 43.5
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 1.2e-25 122.1 146 42.5
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 1.6e-25 121.7 149 44.3
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.6e-25 121.7 124 46.8
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 2.1e-25 121.3 142 44.4
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 2.7e-25 120.9 146 43.2
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 2.7e-25 120.9 148 45.3
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 2.7e-25 120.9 147 42.9
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 2.7e-25 120.9 147 42.9
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 6.0e-25 119.8 142 46.5
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 6.0e-25 119.8 146 43.2
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 7.8e-25 119.4 150 41.3
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 1.0e-24 119.0 123 46.3
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 1.0e-24 119.0 150 42.0
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 1.3e-24 118.6 150 43.3
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 1.7e-24 118.2 125 48.0
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 1.7e-24 118.2 146 42.5
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 1.7e-24 118.2 144 45.8
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 1.7e-24 118.2 150 40.0
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.3e-24 117.9 150 44.0
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 3.0e-24 117.5 142 43.7
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 3.9e-24 117.1 146 43.8
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 3.9e-24 117.1 154 42.2
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 3.9e-24 117.1 145 41.4
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 3.9e-24 117.1 154 42.2
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 3.9e-24 117.1 153 42.5
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 5.1e-24 116.7 166 41.6
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 5.1e-24 116.7 150 42.0
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 6.6e-24 116.3 150 42.0
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 8.7e-24 115.9 150 43.3
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 1.1e-23 115.5 142 45.1
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.5e-23 115.2 150 42.0
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 1.9e-23 114.8 150 40.0
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 2.5e-23 114.4 146 42.5
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 3.3e-23 114.0 139 41.7
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 9.6e-23 112.5 150 40.0
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 9.6e-23 112.5 150 41.3
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 9.6e-23 112.5 142 39.4
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 9.6e-23 112.5 142 42.3
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 1.6e-22 111.7 142 40.8
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 1.6e-22 111.7 142 40.1
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 1.6e-22 111.7 146 40.4
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 2.1e-22 111.3 145 41.4
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 2.1e-22 111.3 145 41.4
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 2.8e-22 110.9 142 40.1
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 4.8e-22 110.2 129 43.4
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 4.8e-22 110.2 179 38.0
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 6.2e-22 109.8 142 38.0
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 6.2e-22 109.8 150 38.7
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 8.1e-22 109.4 142 39.4
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 8.1e-22 109.4 142 39.4
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 1.4e-21 108.6 152 39.5
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 3.1e-21 107.5 179 37.4
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 4.0e-21 107.1 143 38.5
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 4.0e-21 107.1 151 43.7
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 5.3e-21 106.7 153 38.6
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 5.3e-21 106.7 145 39.3
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 5.3e-21 106.7 143 39.9
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 9.0e-21 105.9 143 40.6
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 1.2e-20 105.5 152 40.1
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 2.6e-20 104.4 182 36.8
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 5.8e-20 103.2 146 39.7
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 3.8e-19 100.5 147 37.4
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 4.9e-19 100.1 150 38.7
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 1.9e-18 98.2 144 39.6
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 4.2e-18 97.1 92 48.9
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 4.2e-18 97.1 92 50.0
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 4.2e-18 97.1 111 40.5
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 1.2e-17 95.5 122 40.2
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.3e-16 92.0 153 36.6
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 8.7e-16 89.4 154 40.3
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 2.1e-14 84.7 74 51.4
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 3.7e-14 84.0 142 36.6
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 9.0e-13 79.3 152 36.8
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 9.9e-12 75.9 91 37.4
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 2.2e-11 74.7 114 39.5
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 4.6e-09 67.0 129 33.3
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 4.6e-09 67.0 61 50.8
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 3.9e-08 63.9 57 50.9
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 5.1e-08 63.5 52 53.8


User provided reference genes

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