Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 3.3e-133 478.4 247 100.0
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 4.1e-51 205.7 154 69.5
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 3.9e-49 199.1 169 63.9
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 8.6e-49 198.0 144 69.4
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 1.1e-48 197.6 127 78.0
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 1.5e-48 197.2 148 71.6
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 2.5e-48 196.4 169 62.1
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 1.2e-47 194.1 148 67.6
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 1.2e-47 194.1 148 70.3
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 2.1e-47 193.4 155 65.8
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 2.1e-47 193.4 150 67.3
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 2.8e-47 193.0 176 61.9
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 2.8e-47 193.0 148 70.3
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 6.2e-47 191.8 144 68.1
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 8.1e-47 191.4 170 62.4
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 1.4e-46 190.7 174 62.1
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 1.4e-46 190.7 150 66.7
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 1.4e-46 190.7 162 63.6
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 1.4e-46 190.7 150 66.0
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 1.8e-46 190.3 154 65.6
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.8e-46 190.3 146 67.8
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 1.8e-46 190.3 146 67.8
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 1.8e-46 190.3 152 67.1
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 3.1e-46 189.5 150 64.7
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 3.1e-46 189.5 148 66.2
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 4.0e-46 189.1 148 66.9
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 4.0e-46 189.1 146 67.8
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 5.2e-46 188.7 152 65.1
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 6.8e-46 188.3 142 67.6
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 8.9e-46 188.0 160 62.5
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 8.9e-46 188.0 185 58.9
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 8.9e-46 188.0 149 67.1
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 1.2e-45 187.6 152 64.5
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 1.5e-45 187.2 143 65.7
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 1.5e-45 187.2 153 65.4
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 1.5e-45 187.2 143 67.8
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 2.0e-45 186.8 133 69.9
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 2.0e-45 186.8 169 61.5
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 2.0e-45 186.8 124 75.0
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 2.6e-45 186.4 160 65.0
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 2.6e-45 186.4 155 65.8
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 2.6e-45 186.4 172 58.7
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 2.6e-45 186.4 147 66.7
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 3.4e-45 186.0 144 66.0
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 3.4e-45 186.0 128 76.6
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 4.4e-45 185.7 151 64.9
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 4.4e-45 185.7 187 57.2
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 5.8e-45 185.3 144 67.4
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 5.8e-45 185.3 134 69.4
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 5.8e-45 185.3 144 66.7
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 5.8e-45 185.3 157 63.1
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 7.6e-45 184.9 149 63.8
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 7.6e-45 184.9 146 66.4
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 7.6e-45 184.9 173 58.4
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 9.9e-45 184.5 146 63.0
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 9.9e-45 184.5 151 62.9
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 9.9e-45 184.5 156 62.8
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 9.9e-45 184.5 155 62.6
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 1.3e-44 184.1 156 64.1
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 1.7e-44 183.7 167 58.7
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 1.7e-44 183.7 142 69.0
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 2.2e-44 183.3 157 64.3
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 2.2e-44 183.3 126 72.2
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 2.2e-44 183.3 143 67.8
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 2.2e-44 183.3 175 57.1
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 2.9e-44 183.0 149 63.8
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 3.8e-44 182.6 142 68.3
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 3.8e-44 182.6 152 61.8
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 3.8e-44 182.6 183 56.8
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 4.9e-44 182.2 159 63.5
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 4.9e-44 182.2 148 66.9
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 6.4e-44 181.8 145 64.8
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 8.4e-44 181.4 166 59.0
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 1.1e-43 181.0 150 64.0
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 1.1e-43 181.0 155 61.3
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 1.4e-43 180.6 190 55.3
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 2.4e-43 179.9 149 64.4
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 2.4e-43 179.9 149 64.4
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 3.2e-43 179.5 163 58.9
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.2e-43 179.5 163 58.9
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 3.2e-43 179.5 140 66.4
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 4.2e-43 179.1 153 62.7
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 4.2e-43 179.1 149 62.4
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 5.4e-43 178.7 152 61.8
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 5.4e-43 178.7 146 63.0
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 9.3e-43 177.9 149 67.1
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 9.3e-43 177.9 160 60.6
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 9.3e-43 177.9 150 64.7
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 1.2e-42 177.6 134 66.4
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 1.2e-42 177.6 165 59.4
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 1.2e-42 177.6 165 59.4
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.2e-42 177.6 163 58.3
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 1.2e-42 177.6 160 58.8
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 2.1e-42 176.8 168 62.5
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 2.7e-42 176.4 187 55.6
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 2.7e-42 176.4 136 65.4
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 2.7e-42 176.4 182 54.4
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 2.7e-42 176.4 165 58.8
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 3.5e-42 176.0 147 61.2
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.5e-42 176.0 163 59.5
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 3.5e-42 176.0 140 67.9
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 7.8e-42 174.9 155 61.3
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.0e-41 174.5 163 58.3
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 2.3e-41 173.3 165 57.6
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 2.3e-41 173.3 165 57.6
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 5.1e-41 172.2 132 67.4
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 6.6e-41 171.8 142 62.0
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 1.5e-40 170.6 135 65.9
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 2.5e-40 169.9 137 62.0
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 4.0e-38 162.5 119 68.1
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 2.2e-36 156.8 183 50.3
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 1.4e-35 154.1 110 71.8
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 1.4e-35 154.1 117 67.5
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 2.4e-35 153.3 120 70.0
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 4.6e-34 149.1 179 50.3
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 1.5e-32 144.1 134 63.4
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 7.3e-32 141.7 108 67.6
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.1e-27 127.9 85 78.8
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.4e-27 126.7 85 78.8
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 4.2e-27 125.9 85 77.6
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 5.1e-25 119.0 147 47.6
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 7.6e-21 105.1 121 49.6
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 2.5e-19 100.1 87 63.2
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 3.2e-19 99.8 85 60.0
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 2.7e-18 96.7 108 55.6
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 4.6e-18 95.9 134 45.5
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 3.3e-16 89.7 60 71.7
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 4.3e-16 89.4 77 59.7
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 5.7e-08 62.4 105 39.0


User provided reference genes

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