Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g30933 Chara braunii HOM05D006430 ORTHO05D007585 2.1e-98 362.8 254 100.0
Phvul.002G268300 Phaseolus vulgaris HOM05D006430 ORTHO05D007585 3.0e-52 209.5 227 74.4
VMungo0251G0154 Vigna mungo HOM05D006430 ORTHO05D007585 8.6e-52 208.0 227 74.0
Migut.L00052 Erythranthe guttata HOM05D006430 ORTHO05D007585 1.1e-51 207.6 227 70.9
SGA_v2.0_scaffold47G17683 Striga asiatica HOM05D006430 ORTHO05D007585 1.1e-51 207.6 220 72.3
Ca_17667_v3 Cicer arietinum L. HOM05D006430 ORTHO05D007585 1.5e-51 207.2 227 74.4
Cc07_g16870 Coffea canephora HOM05D006430 ORTHO05D007585 1.5e-51 207.2 230 69.6
Cpa.g.sc72.36 Carica papaya HOM05D006430 ORTHO05D007585 2.1e-50 203.4 223 73.1
Ciclev10026172m.g Citrus clementina HOM05D006430 ORTHO05D007585 2.1e-50 203.4 220 74.1
Mapoly0011s0172 Marchantia polymorpha HOM05D006430 ORTHO05D007585 2.1e-50 203.4 227 75.8
Ah.03g140160 Amaranthus hybridus HOM05D006430 ORTHO05D007585 2.8e-50 203.0 224 72.3
CDE08G0124 Ceratophyllum demersum HOM05D006430 ORTHO05D007585 3.6e-50 202.6 226 74.8
Rhsim08G0004200 Rhododendron simsii HOM05D006430 ORTHO05D007585 3.6e-50 202.6 232 70.7
Thecc.01G118500 Theobroma cacao HOM05D006430 ORTHO05D007585 3.6e-50 202.6 223 73.1
vmacro18651 Vaccinium macrocarpon HOM05D006430 ORTHO05D007585 4.7e-50 202.2 230 71.3
HPP92_016153 Vanilla planifolia HOM05D006430 ORTHO05D007585 4.7e-50 202.2 229 74.7
BcaB02g09817 Brassica carinata HOM05D006430 ORTHO05D007585 6.2e-50 201.8 228 69.7
BcaC01g02704 Brassica carinata HOM05D006430 ORTHO05D007585 6.2e-50 201.8 228 69.7
C03p61450 Brassica napus HOM05D006430 ORTHO05D007585 6.2e-50 201.8 228 69.7
BolC3t18404H Brassica oleracea HOM05D006430 ORTHO05D007585 6.2e-50 201.8 228 69.7
CSS0010804 Camellia sinensis var. sinensis HOM05D006430 ORTHO05D007585 6.2e-50 201.8 223 74.0
AUR62003640 Chenopodium quinoa HOM05D006430 ORTHO05D007585 6.2e-50 201.8 224 72.8
PSO675G2196 Papaver somniferum HOM05D006430 ORTHO05D007585 6.2e-50 201.8 223 74.9
AUR62017950 Chenopodium quinoa HOM05D006430 ORTHO05D007585 8.0e-50 201.4 224 72.8
Eucgr.H04894 Eucalyptus grandis HOM05D006430 ORTHO05D007585 8.0e-50 201.4 223 72.2
THA.LOC104799376 Tarenaya hassleriana HOM05D006430 ORTHO05D007585 8.0e-50 201.4 226 72.6
Dinv02715 Davidia involucrata HOM05D006430 ORTHO05D007585 1.0e-49 201.1 228 72.4
AL8G42180 Arabidopsis lyrata HOM05D006430 ORTHO05D007585 1.4e-49 200.7 228 69.3
CiPaw.03G130500 Carya illinoinensis HOM05D006430 ORTHO05D007585 1.4e-49 200.7 228 69.7
FvH4_1g23870 Fragaria vesca HOM05D006430 ORTHO05D007585 1.4e-49 200.7 223 73.1
QL08p047156 Quercus lobata HOM05D006430 ORTHO05D007585 1.4e-49 200.7 223 74.4
Sabra16G0192700 Salix brachista HOM05D006430 ORTHO05D007585 1.4e-49 200.7 225 72.4
MSTRG.3821 Avicennia marina HOM05D006430 ORTHO05D007585 1.8e-49 200.3 227 69.6
A06p31510 Brassica napus HOM05D006430 ORTHO05D007585 1.8e-49 200.3 223 70.4
BraA06t26090Z Brassica rapa HOM05D006430 ORTHO05D007585 1.8e-49 200.3 223 70.4
CANSAT01G2305 Cannabis sativa HOM05D006430 ORTHO05D007585 1.8e-49 200.3 223 74.0
Thhalv10004678m.g Eutrema salsugineum HOM05D006430 ORTHO05D007585 1.8e-49 200.3 228 69.7
FAN19G1422 Fragaria x ananassa HOM05D006430 ORTHO05D007585 1.8e-49 200.3 223 72.6
unitig_37.g12838 Utricularia gibba HOM05D006430 ORTHO05D007585 1.8e-49 200.3 225 70.7
EL10Ac6g15234 Beta vulgaris HOM05D006430 ORTHO05D007585 2.3e-49 199.9 224 72.8
COL.COLO4_22379 Corchorus olitorius HOM05D006430 ORTHO05D007585 2.3e-49 199.9 223 74.0
Gohir.A08G035600 Gossypium hirsutum HOM05D006430 ORTHO05D007585 2.3e-49 199.9 223 72.6
Hma1.2p1_0253F.1_g102940 Hydrangea macrophylla HOM05D006430 ORTHO05D007585 2.3e-49 199.9 223 73.1
Manes.12G148000 Manihot esculenta HOM05D006430 ORTHO05D007585 2.3e-49 199.9 227 71.4
Atru.chr4.619 Acer truncatum HOM05D006430 ORTHO05D007585 3.1e-49 199.5 220 73.6
Carub.0008s2554 Capsella rubella HOM05D006430 ORTHO05D007585 3.1e-49 199.5 228 69.3
FAN26G1413 Fragaria x ananassa HOM05D006430 ORTHO05D007585 3.1e-49 199.5 223 71.3
Gohir.D08G046300 Gossypium hirsutum HOM05D006430 ORTHO05D007585 3.1e-49 199.5 223 72.6
Gorai.004G045500 Gossypium raimondii HOM05D006430 ORTHO05D007585 3.1e-49 199.5 223 72.6
Lj4g0013268 Lotus japonicus HOM05D006430 ORTHO05D007585 3.1e-49 199.5 227 71.4
Medtr8g092620 Medicago truncatula HOM05D006430 ORTHO05D007585 3.1e-49 199.5 227 72.2
TPR.G2201 Trifolium pratense HOM05D006430 ORTHO05D007585 3.1e-49 199.5 227 73.1
HanXRQChr07g0201191 Helianthus annuus HOM05D006430 ORTHO05D007585 4.0e-49 199.1 227 72.7
Oeu015836.1 Olea europaea HOM05D006430 ORTHO05D007585 4.0e-49 199.1 225 68.9
GSVIVG01016788001 Vitis vinifera HOM05D006430 ORTHO05D007585 4.0e-49 199.1 223 70.4
Actinidia09815 Actinidia chinensis HOM05D006430 ORTHO05D007585 5.2e-49 198.7 225 72.4
Duzib187G0475 Durio zibethinus HOM05D006430 ORTHO05D007585 5.2e-49 198.7 227 69.2
Psat7g048920 Pisum sativum HOM05D006430 ORTHO05D007585 5.2e-49 198.7 227 72.7
RcHm_v2.0_Chr2g0119831 Rosa chinensis HOM05D006430 ORTHO05D007585 5.2e-49 198.7 223 72.6
RcHm_v2.0_Chr6g0259141 Rosa chinensis HOM05D006430 ORTHO05D007585 5.2e-49 198.7 223 72.6
AT5G64730 Arabidopsis thaliana HOM05D006430 ORTHO05D007585 6.8e-49 198.4 227 68.7
CARHR278720 Cardamine hirsuta HOM05D006430 ORTHO05D007585 6.8e-49 198.4 228 69.7
Cfa002800 Carpinus fangiana HOM05D006430 ORTHO05D007585 6.8e-49 198.4 223 70.4
Lsat_1_v5_gn_2_116520 Lactuca sativa HOM05D006430 ORTHO05D007585 6.8e-49 198.4 227 72.7
Potri.001G306500 Populus trichocarpa HOM05D006430 ORTHO05D007585 6.8e-49 198.4 225 71.1
Haze_25101 Corylus avellana HOM05D006430 ORTHO05D007585 8.9e-49 198.0 223 70.4
CsaV3_6G042010 Cucumis sativus L. HOM05D006430 ORTHO05D007585 8.9e-49 198.0 223 72.2
MELO3C008023.2 Cucumis melo HOM05D006430 ORTHO05D007585 1.2e-48 197.6 223 72.2
DCAR_011471 Daucus carota HOM05D006430 ORTHO05D007585 1.5e-48 197.2 228 71.1
Sc03g0004640 Simmondsia chinensis HOM05D006430 ORTHO05D007585 2.0e-48 196.8 224 71.9
Aqoxy6G00390 Aquilegia oxysepala HOM05D006430 ORTHO05D007585 2.6e-48 196.4 223 72.6
ATR0311G002 Amborella trichopoda HOM05D006430 ORTHO05D007585 3.4e-48 196.1 227 70.9
Sp2g27800 Schrenkiella parvula HOM05D006430 ORTHO05D007585 3.4e-48 196.1 228 68.4
TAR628G1086 Trochodendron aralioides HOM05D006430 ORTHO05D007585 3.4e-48 196.1 227 71.4
MBI09_g02046_MAGBIO Magnolia biondii HOM05D006430 ORTHO05D007585 5.8e-48 195.3 227 59.0
arahy.Tifrunner.gnm1.ann1.NYPU2B Arachis hypogaea HOM05D006430 ORTHO05D007585 7.5e-48 194.9 246 69.1
Glyma.08G145700 Glycine max HOM05D006430 ORTHO05D007585 7.5e-48 194.9 227 74.0
Peaxi162Scf00025g02621 Petunia axillaris HOM05D006430 ORTHO05D007585 7.5e-48 194.9 220 69.5
ECA238G4454 Erigeron canadensis HOM05D006430 ORTHO05D007585 1.7e-47 193.7 227 68.3
Prupe.6G161500 Prunus persica HOM05D006430 ORTHO05D007585 2.2e-47 193.4 223 71.3
TWI79G0409 Tripterygium wilfordii HOM05D006430 ORTHO05D007585 2.2e-47 193.4 223 68.2
FAN05G3385 Fragaria x ananassa HOM05D006430 ORTHO05D007585 8.3e-47 191.4 223 44.8
Pp3c23_12950 Physcomitrium patens HOM05D006430 ORTHO05D007585 1.1e-46 191.0 229 72.1
Sed0026374 Sechium edule HOM05D006430 ORTHO05D007585 1.4e-46 190.7 232 68.5
Nitab4.5_0001582g0080 Nicotiana tabacum HOM05D006430 ORTHO05D007585 7.0e-46 188.3 223 69.1
Solyc11g005550.2 Solanum lycopersicum HOM05D006430 ORTHO05D007585 9.2e-46 188.0 223 68.2
Sopen11g001520 Solanum pennellii HOM05D006430 ORTHO05D007585 9.2e-46 188.0 223 68.2
RcHm_v2.0_Chr2g0119791 Rosa chinensis HOM05D006430 ORTHO05D007585 1.2e-45 187.6 223 44.4
Nitab4.5_0002138g0060 Nicotiana tabacum HOM05D006430 ORTHO05D007585 1.6e-45 187.2 223 68.6
PGSC0003DMG400003975 Solanum tuberosum HOM05D006430 ORTHO05D007585 3.5e-45 186.0 223 67.7
Lalb_Chr12g0203371 Lupinus albus HOM05D006430 ORTHO05D007585 4.6e-45 185.7 227 72.2
Glyma.05G187400 Glycine max HOM05D006430 ORTHO05D007585 7.8e-45 184.9 228 72.4
Aa31LG1G17180 Aethionema arabicum HOM05D006430 ORTHO05D007585 6.6e-44 181.8 262 61.1
FAN28G2007 Fragaria x ananassa HOM05D006430 ORTHO05D007585 2.5e-43 179.9 254 63.0
Manes.12G148300 Manihot esculenta HOM05D006430 ORTHO05D007585 5.6e-43 178.7 216 54.6
AagrBONN_evm.TU.Sc2ySwM_228.1007 Anthoceros agrestis HOM05D006430 ORTHO05D007585 7.3e-43 178.3 214 74.8
Hund19623 Selenicereus undatus HOM05D006430 ORTHO05D007585 9.5e-43 177.9 279 59.1
arahy.Tifrunner.gnm1.ann1.DL1CJS Arachis hypogaea HOM05D006430 ORTHO05D007585 1.2e-42 177.6 241 67.6
arahy.Tifrunner.gnm1.ann1.H2AKZ1 Arachis hypogaea HOM05D006430 ORTHO05D007585 6.8e-41 171.8 227 69.6
SMO361G0710 Selaginella moellendorffii HOM05D006430 ORTHO05D007585 9.2e-38 161.4 226 62.8
Zm00001eb181820 Zea mays HOM05D006430 ORTHO05D007585 2.3e-36 156.8 231 66.7
Lj2C583G2 Lonicera japonica HOM05D000121 ORTHO05D000102 3.8e-31 139.4 228 62.7
MCO04G315 Micromonas commoda HOM05D006430 ORTHO05D007585 9.2e-30 134.8 222 57.2
Cre16.g675301 Chlamydomonas reinhardtii HOM05D006430 ORTHO05D007585 6.0e-29 132.1 188 64.4
PGR102G2076 Punica granatum HOM05D006430 ORTHO05D007585 5.1e-28 129.0 98 61.2
Os02g0543400 Oryza sativa ssp. japonica HOM05D006430 ORTHO05D007585 1.2e-26 124.4 227 58.1
Lj2A575G41 Lonicera japonica HOM05D006430 ORTHO05D007585 4.7e-26 122.5 228 46.1
CiPaw.09G145300 Carya illinoinensis HOM05D006430 ORTHO05D007585 1.1e-25 121.3 101 54.5
PRCOL_00003041 Prasinoderma coloniale HOM05D006430 ORTHO05D007585 1.3e-23 114.4 212 56.1
CiPaw.15G162200 Carya illinoinensis HOM05D006430 ORTHO05D007585 2.2e-23 113.6 94 55.3
FvH4_6g20551 Fragaria vesca HOM05D006430 ORTHO05D007585 2.1e-21 107.1 60 73.3
Hma1.2p1_0253F.1_g102950 Hydrangea macrophylla HOM05D006430 ORTHO05D007585 7.8e-21 105.1 60 73.3
SHI11515 Sapria himalayana HOM05D000105 ORTHO05D000023 1.0e-20 104.8 60 71.7
SEGI_20850 Sequoiadendron giganteum HOM05D006430 ORTHO05D007585 3.0e-20 103.2 61 68.9
Peaxi162Scf01159g00015 Petunia axillaris HOM05D006430 ORTHO05D007585 1.3e-15 87.8 53 66.0
BcaB02g09845 Brassica carinata HOM05D006430 ORTHO05D007585 6.2e-10 68.9 65 50.8
Lsat_1_v5_gn_8_143080 Lactuca sativa HOM05D006430 ORTHO05D007585 4.0e-09 66.2 64 50.0
Cfa023960 Carpinus fangiana HOM05D006430 ORTHO05D007585 4.9e-07 59.3 203 24.6
Lsat_1_v5_gn_7_93000 Lactuca sativa HOM05D006430 ORTHO05D007585 8.4e-07 58.5 50 54.0
Lsat_1_v5_gn_4_159620 Lactuca sativa HOM05D000911 ORTHO05D007585 1.1e-06 58.2 55 47.3
Lsat_1_v5_gn_2_95121 Lactuca sativa HOM05D000015 ORTHO05D007585 1.4e-06 57.8 45 57.8
Lsat_1_v5_gn_9_87941 Lactuca sativa HOM05D006430 ORTHO05D007585 5.5e-06 55.8 46 56.5


User provided reference genes

Program Settings