Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g30829 Chara braunii HOM05D005489 ORTHO05D006629 2.7e-76 288.5 136 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2049 Anthoceros agrestis HOM05D005489 ORTHO05D006629 5.4e-53 211.1 136 70.6
SMO116G0262 Selaginella moellendorffii HOM05D005489 ORTHO05D006629 1.8e-48 196.1 136 65.4
Pp3c1_10200 Physcomitrium patens HOM05D005489 ORTHO05D006629 4.5e-47 191.4 135 65.9
Pp3c2_28270 Physcomitrium patens HOM05D005489 ORTHO05D006629 7.6e-47 190.7 135 65.2
SEGI_34511 Sequoiadendron giganteum HOM05D005489 ORTHO05D006629 4.9e-46 188.0 129 65.9
CAN.G255.20 Capsicum annuum HOM05D005489 ORTHO05D006629 2.7e-44 182.2 128 65.6
Sopen11g008580 Solanum pennellii HOM05D005489 ORTHO05D006629 7.9e-44 180.6 128 64.1
Nn5g27958 Nelumbo nucifera HOM05D005489 ORTHO05D006629 1.0e-43 180.3 128 64.1
Solyc11g013550.2 Solanum lycopersicum HOM05D005489 ORTHO05D006629 1.0e-43 180.3 128 64.1
PGSC0003DMG400027793 Solanum tuberosum HOM05D005489 ORTHO05D006629 1.0e-43 180.3 128 64.1
Mapoly0004s0020 Marchantia polymorpha HOM05D005489 ORTHO05D006629 1.3e-43 179.9 146 59.6
Lsat_1_v5_gn_4_135561 Lactuca sativa HOM05D005489 ORTHO05D006629 3.9e-43 178.3 128 64.1
Peaxi162Scf01011g00023 Petunia axillaris HOM05D005489 ORTHO05D006629 3.9e-43 178.3 125 66.4
CDE06G1809 Ceratophyllum demersum HOM05D005489 ORTHO05D006629 5.1e-43 177.9 128 61.7
Dinv26716 Davidia involucrata HOM05D005489 ORTHO05D006629 5.1e-43 177.9 128 63.3
Hma1.2p1_0221F.1_g093180 Hydrangea macrophylla HOM05D005489 ORTHO05D006629 5.1e-43 177.9 128 63.3
THA.LOC104806808 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 5.1e-43 177.9 128 64.1
Aqoxy5G02479 Aquilegia oxysepala HOM05D005489 ORTHO05D006629 6.7e-43 177.6 128 62.5
HanXRQChr09g0260151 Helianthus annuus HOM05D005489 ORTHO05D006629 6.7e-43 177.6 128 63.3
THA.LOC104813132 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 8.7e-43 177.2 128 64.1
Carub.0001s3388 Capsella rubella HOM05D005489 ORTHO05D006629 1.1e-42 176.8 128 63.3
PGR044G1289 Punica granatum HOM05D005489 ORTHO05D006629 1.1e-42 176.8 128 61.7
Sed0015736 Sechium edule HOM05D005489 ORTHO05D006629 1.1e-42 176.8 128 63.3
Nn1g08538 Nelumbo nucifera HOM05D005489 ORTHO05D006629 1.5e-42 176.4 128 61.7
arahy.Tifrunner.gnm1.ann1.204R5H Arachis hypogaea HOM05D005489 ORTHO05D006629 1.9e-42 176.0 128 61.7
BcaB03g13640 Brassica carinata HOM05D005489 ORTHO05D006629 1.9e-42 176.0 128 63.3
A05p23180 Brassica napus HOM05D005489 ORTHO05D006629 1.9e-42 176.0 128 63.3
C05p36630 Brassica napus HOM05D005489 ORTHO05D006629 1.9e-42 176.0 128 63.3
BraA05t21185Z Brassica rapa HOM05D005489 ORTHO05D006629 1.9e-42 176.0 128 63.3
MELO3C022783.2 Cucumis melo HOM05D005489 ORTHO05D006629 1.9e-42 176.0 128 62.5
Thhalv10005115m.g Eutrema salsugineum HOM05D005489 ORTHO05D006629 1.9e-42 176.0 128 62.5
arahy.Tifrunner.gnm1.ann1.64ZY3M Arachis hypogaea HOM05D005489 ORTHO05D006629 2.5e-42 175.6 128 61.7
HanXRQChr11g0326271 Helianthus annuus HOM05D005489 ORTHO05D006629 2.5e-42 175.6 128 62.5
TWI56G0906 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 2.5e-42 175.6 128 60.2
CARHR034780 Cardamine hirsuta HOM05D005489 ORTHO05D006629 3.3e-42 175.3 128 61.7
COL.COLO4_32811 Corchorus olitorius HOM05D005489 ORTHO05D006629 3.3e-42 175.3 128 61.7
TAR628G1556 Trochodendron aralioides HOM05D005489 ORTHO05D006629 3.3e-42 175.3 127 62.2
AL1G51120 Arabidopsis lyrata HOM05D005489 ORTHO05D006629 4.3e-42 174.9 128 62.5
AT1G36980 Arabidopsis thaliana HOM05D005489 ORTHO05D006629 4.3e-42 174.9 128 62.5
Gohir.A01G187700 Gossypium hirsutum HOM05D005489 ORTHO05D006629 4.3e-42 174.9 128 60.2
Gohir.A06G041000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 4.3e-42 174.9 128 60.9
Gohir.D06G041900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 4.3e-42 174.9 128 60.9
Gorai.010G047100 Gossypium raimondii HOM05D005489 ORTHO05D006629 4.3e-42 174.9 128 60.9
Manes.18G073000 Manihot esculenta HOM05D005489 ORTHO05D006629 4.3e-42 174.9 128 60.9
Sp1g31180 Schrenkiella parvula HOM05D005489 ORTHO05D006629 4.3e-42 174.9 128 63.3
Thecc.08G116800 Theobroma cacao HOM05D005489 ORTHO05D006629 5.6e-42 174.5 128 60.2
TAR197G0004 Trochodendron aralioides HOM05D005489 ORTHO05D006629 5.6e-42 174.5 128 61.7
Ciclev10002818m.g Citrus clementina HOM05D005489 ORTHO05D006629 7.4e-42 174.1 128 60.9
Dinv27383 Davidia involucrata HOM05D005489 ORTHO05D006629 7.4e-42 174.1 128 62.5
ECA232G0625 Erigeron canadensis HOM05D005489 ORTHO05D006629 7.4e-42 174.1 128 63.3
Gohir.A02G075000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 7.4e-42 174.1 127 61.4
PSO017G5790 Papaver somniferum HOM05D005489 ORTHO05D006629 9.6e-42 173.7 128 61.7
PSO170G3859 Papaver somniferum HOM05D005489 ORTHO05D006629 9.6e-42 173.7 128 61.7
Ca_25761_v3 Cicer arietinum L. HOM05D005489 ORTHO05D006629 1.3e-41 173.3 128 60.9
Gohir.D02G082100 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.3e-41 173.3 127 61.4
Medtr3g073300 Medicago truncatula HOM05D005489 ORTHO05D006629 1.3e-41 173.3 128 60.2
TPR.G32948 Trifolium pratense HOM05D005489 ORTHO05D006629 1.3e-41 173.3 128 60.9
Atru.chr13.1318 Acer truncatum HOM05D005489 ORTHO05D006629 2.1e-41 172.6 127 60.6
Atru.chr13.1362 Acer truncatum HOM05D005489 ORTHO05D006629 2.1e-41 172.6 127 60.6
EL10Ac1g00039 Beta vulgaris HOM05D005489 ORTHO05D006629 2.1e-41 172.6 125 64.0
CiPaw.05G228700 Carya illinoinensis HOM05D005489 ORTHO05D006629 2.1e-41 172.6 128 60.2
FvH4_5g38950 Fragaria vesca HOM05D005489 ORTHO05D006629 2.1e-41 172.6 128 60.9
FAN04G1587 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.1e-41 172.6 128 60.9
FAN08G2064 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.1e-41 172.6 128 60.9
FAN18G3455 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.1e-41 172.6 128 60.9
Oeu043793.1 Olea europaea HOM05D005489 ORTHO05D006629 2.1e-41 172.6 128 61.7
QL12p035283 Quercus lobata HOM05D005489 ORTHO05D006629 2.1e-41 172.6 128 60.2
Duzib041G0073 Durio zibethinus HOM05D005489 ORTHO05D006629 2.8e-41 172.2 127 60.6
Glyma.04G253700 Glycine max HOM05D005489 ORTHO05D006629 2.8e-41 172.2 128 60.9
Glyma.06G108600 Glycine max HOM05D005489 ORTHO05D006629 2.8e-41 172.2 128 60.9
Lalb_Chr08g0241711 Lupinus albus HOM05D005489 ORTHO05D006629 2.8e-41 172.2 128 60.2
Psat5g135600 Pisum sativum HOM05D005489 ORTHO05D006629 2.8e-41 172.2 128 60.2
Lj1g0000272 Lotus japonicus HOM05D005489 ORTHO05D006629 3.7e-41 171.8 128 61.7
Lalb_Chr11g0065701 Lupinus albus HOM05D005489 ORTHO05D006629 3.7e-41 171.8 128 60.9
TWI12G0464 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 3.7e-41 171.8 128 59.4
Prupe.1G506000 Prunus persica HOM05D005489 ORTHO05D006629 4.8e-41 171.4 128 60.9
VMungo1127G1458 Vigna mungo HOM05D005489 ORTHO05D006629 4.8e-41 171.4 128 60.9
GSVIVG01008943001 Vitis vinifera HOM05D005489 ORTHO05D006629 4.8e-41 171.4 128 59.4
RcHm_v2.0_Chr7g0240921 Rosa chinensis HOM05D005489 ORTHO05D006629 6.2e-41 171.0 128 59.4
Oeu032962.1 Olea europaea HOM05D005489 ORTHO05D006629 1.1e-40 170.2 128 63.3
Sabra02G0070300 Salix brachista HOM05D005489 ORTHO05D006629 1.1e-40 170.2 128 59.4
Zm00001eb244520 Zea mays HOM05D005489 ORTHO05D006629 1.1e-40 170.2 128 64.1
Phvul.011G165300 Phaseolus vulgaris HOM05D005489 ORTHO05D006629 1.4e-40 169.9 128 60.2
Migut.C01190 Erythranthe guttata HOM05D005489 ORTHO05D006629 1.8e-40 169.5 128 60.2
SalBow1G3581 Salvia bowleyana HOM05D005489 ORTHO05D006629 1.8e-40 169.5 125 62.4
MD15G1359200 Malus domestica HOM05D005489 ORTHO05D006629 2.4e-40 169.1 128 60.2
Potri.002G089300 Populus trichocarpa HOM05D005489 ORTHO05D006629 2.4e-40 169.1 128 59.4
SGA_v2.0_scaffold118G32436 Striga asiatica HOM05D005489 ORTHO05D006629 2.4e-40 169.1 125 61.6
DCAR_014792 Daucus carota HOM05D005489 ORTHO05D006629 3.1e-40 168.7 119 65.5
Duzib093G1687 Durio zibethinus HOM05D005489 ORTHO05D006629 3.1e-40 168.7 128 59.4
SGA_v2.0_scaffold24G10504 Striga asiatica HOM05D005489 ORTHO05D006629 4.0e-40 168.3 125 60.8
HPP92_002297 Vanilla planifolia HOM05D005489 ORTHO05D006629 5.3e-40 167.9 129 59.7
Os02g0566900 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 9.0e-40 167.2 129 62.0
MSTRG.1486 Avicennia marina HOM05D005489 ORTHO05D006629 1.2e-39 166.8 125 60.0
MBI06_g01046_MAGBIO Magnolia biondii HOM05D005489 ORTHO05D006629 2.0e-39 166.0 127 59.1
HPP92_005944 Vanilla planifolia HOM05D005489 ORTHO05D006629 2.0e-39 166.0 129 60.5
Sc01g0001550 Simmondsia chinensis HOM05D005489 ORTHO05D006629 3.4e-39 165.2 119 62.2
Potri.005G171901 Populus trichocarpa HOM05D005489 ORTHO05D006629 4.5e-39 164.9 128 57.0
Nitab4.5_0000051g0120 Nicotiana tabacum HOM05D005489 ORTHO05D006629 5.8e-39 164.5 119 63.0
Hund16821 Selenicereus undatus HOM05D005489 ORTHO05D006629 1.3e-38 163.3 119 63.0
Zm00001eb100550 Zea mays HOM05D005489 ORTHO05D006629 2.2e-38 162.5 131 58.0
Os09g0453000 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 2.9e-38 162.2 131 59.5
Nitab4.5_0002332g0020 Nicotiana tabacum HOM05D005489 ORTHO05D006629 4.9e-38 161.4 115 64.3
Rhsim06G0109100 Rhododendron simsii HOM05D005489 ORTHO05D006629 8.4e-38 160.6 119 61.3
Aa31LG6G9070 Aethionema arabicum HOM05D005489 ORTHO05D006629 1.4e-37 159.8 119 60.5
Actinidia29431 Actinidia chinensis HOM05D005489 ORTHO05D006629 3.2e-37 158.7 128 57.0
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 3.2e-37 158.7 119 60.5
Migut.N03320 Erythranthe guttata HOM05D005489 ORTHO05D006629 5.5e-37 157.9 125 59.2
Gorai.002G220400 Gossypium raimondii HOM05D005489 ORTHO05D006629 1.6e-36 156.4 119 57.1
Cre01.g042950 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 1.5e-34 149.8 137 52.6
Gohir.D01G181900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 2.5e-34 149.1 116 56.9
BcaC05g27681 Brassica carinata HOM05D005489 ORTHO05D006629 4.3e-34 148.3 115 60.9
Cc10_g10440 Coffea canephora HOM05D005489 ORTHO05D006629 1.3e-33 146.7 119 58.8
BolC5t32398H Brassica oleracea HOM05D005489 ORTHO05D006629 1.8e-32 142.9 134 53.7
unitig_747.g21477 Utricularia gibba HOM05D003597 ORTHO05D004420 1.2e-31 140.2 198 40.4
DCAR_023128 Daucus carota HOM05D005489 ORTHO05D006629 2.4e-24 115.9 66 78.8
CANSAT25G2554 Cannabis sativa HOM05D005489 ORTHO05D006629 5.9e-23 111.3 81 58.0
TAR127G0005 Trochodendron aralioides HOM05D005489 ORTHO05D006629 1.0e-22 110.5 70 70.0
Cfa015959 Carpinus fangiana HOM05D005489 ORTHO05D006629 5.0e-22 108.2 124 46.8
ClCG03G009110 Citrullus lanatus HOM05D005489 ORTHO05D006629 5.0e-22 108.2 70 67.1
CsaV3_5G023520 Cucumis sativus L. HOM05D005489 ORTHO05D006629 5.0e-22 108.2 70 67.1
ATR0121G008 Amborella trichopoda HOM05D005489 ORTHO05D006629 6.5e-22 107.8 72 68.1
Haze_00523 Corylus avellana HOM05D005489 ORTHO05D006629 1.1e-21 107.1 70 65.7
BcaC05g27682 Brassica carinata HOM05D005489 ORTHO05D006629 1.9e-21 106.3 70 67.1
C05p36640 Brassica napus HOM05D005489 ORTHO05D006629 1.9e-21 106.3 70 67.1
Gorai.005G092000 Gossypium raimondii HOM05D005489 ORTHO05D006629 1.9e-21 106.3 108 50.0
PRCOL_00003843 Prasinoderma coloniale HOM05D005489 ORTHO05D006629 1.4e-19 100.1 124 42.7
Nn2g15248 Nelumbo nucifera HOM05D005489 ORTHO05D006629 5.1e-19 98.2 66 63.6
Oeu050268.1 Olea europaea HOM05D005489 ORTHO05D006629 1.5e-18 96.7 60 70.0
Sabra05G0129400 Salix brachista HOM05D005489 ORTHO05D006629 1.5e-18 96.7 119 43.7
Cre03.g159300 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 1.1e-13 80.5 128 32.0
Sopen11g008620 Solanum pennellii HOM05D000147 ORTHO05D004360 2.1e-12 76.3 69 52.2
Eucgr.F04378 Eucalyptus grandis HOM05D005489 ORTHO05D006629 2.3e-11 72.8 40 70.0
AUR62004694 Chenopodium quinoa HOM05D005489 ORTHO05D006629 3.9e-11 72.0 139 35.3
PRCOL_00003098 Prasinoderma coloniale HOM05D001685 ORTHO05D007488 3.1e-08 62.4 129 35.7
SalBow7G4082 Salvia bowleyana HOM05D005489 ORTHO05D006629 7.0e-08 61.2 162 30.9
ClCG03G009140 Citrullus lanatus HOM05D005489 ORTHO05D006629 1.5e-07 60.1 55 50.9
SalBow7G1125 Salvia bowleyana HOM05D002998 ORTHO05D006629 6.5e-06 54.7 25 88.0


User provided reference genes

Program Settings