Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g30802 Chara braunii HOM05D006014 ORTHO05D007608 1.3e-83 313.2 173 100.0
CBR_g39307 Chara braunii HOM05D006014 ORTHO05D007608 1.5e-39 166.8 91 98.9
Pp3c24_17080 Physcomitrium patens HOM05D006014 ORTHO05D007608 2.8e-30 136.0 178 48.9
Ciclev10009636m.g Citrus clementina HOM05D006014 ORTHO05D007608 2.2e-27 126.3 102 62.7
GSVIVG01014290001 Vitis vinifera HOM05D006014 ORTHO05D007608 2.2e-27 126.3 123 55.3
Gohir.D05G347800 Gossypium hirsutum HOM05D006014 ORTHO05D007608 3.8e-27 125.6 128 56.2
Gorai.009G375600 Gossypium raimondii HOM05D006014 ORTHO05D007608 3.8e-27 125.6 128 56.2
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 6.5e-27 124.8 124 55.6
Gohir.A04G035600 Gossypium hirsutum HOM05D006014 ORTHO05D007608 6.5e-27 124.8 105 62.9
Thecc.07G096300 Theobroma cacao HOM05D006014 ORTHO05D007608 1.1e-26 124.0 105 63.8
MD03G1232600 Malus domestica HOM05D006014 ORTHO05D007608 1.5e-26 123.6 181 45.3
Eucgr.F01167 Eucalyptus grandis HOM05D006014 ORTHO05D007608 1.9e-26 123.2 101 64.4
PGR083G0398 Punica granatum HOM05D006014 ORTHO05D007608 2.5e-26 122.9 109 60.6
COL.COLO4_03477 Corchorus olitorius HOM05D006014 ORTHO05D007608 4.2e-26 122.1 105 61.9
Potri.001G396600 Populus trichocarpa HOM05D006014 ORTHO05D007608 4.2e-26 122.1 103 63.1
CANSAT35G1465 Cannabis sativa HOM05D006014 ORTHO05D007608 5.5e-26 121.7 106 61.3
Manes.15G089600 Manihot esculenta HOM05D006014 ORTHO05D007608 5.5e-26 121.7 160 49.4
Pp3c20_13390 Physcomitrium patens HOM05D006014 ORTHO05D007608 5.5e-26 121.7 118 57.6
Dinv14938 Davidia involucrata HOM05D006014 ORTHO05D007608 7.2e-26 121.3 121 56.2
CiPaw.11G167800 Carya illinoinensis HOM05D006014 ORTHO05D007608 1.2e-25 120.6 111 56.8
ClCG11G017820 Citrullus lanatus HOM05D006014 ORTHO05D007608 1.2e-25 120.6 163 46.0
MD11G1253300 Malus domestica HOM05D006014 ORTHO05D007608 1.6e-25 120.2 175 44.6
Nitab4.5_0003033g0060 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.6e-25 120.2 155 49.0
Sabra16G0259700 Salix brachista HOM05D006014 ORTHO05D007608 1.6e-25 120.2 113 60.2
DCAR_019570 Daucus carota HOM05D006014 ORTHO05D007608 2.1e-25 119.8 112 58.9
Duzib170G0605 Durio zibethinus HOM05D006014 ORTHO05D007608 2.7e-25 119.4 123 54.5
Hma1.2p1_1411F.1_g281760 Hydrangea macrophylla HOM05D006014 ORTHO05D007608 2.7e-25 119.4 111 57.7
Cfa020606 Carpinus fangiana HOM05D006014 ORTHO05D007608 4.7e-25 118.6 131 54.2
Prupe.4G176000 Prunus persica HOM05D006014 ORTHO05D007608 4.7e-25 118.6 127 52.8
MELO3C025609.2 Cucumis melo HOM05D006014 ORTHO05D007608 6.1e-25 118.2 163 46.0
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 6.1e-25 118.2 108 59.3
Lalb_Chr07g0182891 Lupinus albus HOM05D006014 ORTHO05D007608 8.0e-25 117.9 105 58.1
Oeu037371.1 Olea europaea HOM05D006014 ORTHO05D007608 8.0e-25 117.9 156 48.1
Nn1g04203 Nelumbo nucifera HOM05D006014 ORTHO05D007608 1.0e-24 117.5 105 62.9
CSS0037767 Camellia sinensis var. sinensis HOM05D006014 ORTHO05D007608 1.8e-24 116.7 155 49.7
FAN25G0078 Fragaria x ananassa HOM05D006014 ORTHO05D007608 2.3e-24 116.3 106 58.5
Mapoly0009s0159 Marchantia polymorpha HOM05D006014 ORTHO05D007608 2.3e-24 116.3 183 44.3
TAR626G1430 Trochodendron aralioides HOM05D006014 ORTHO05D007608 2.3e-24 116.3 125 52.0
CsaV3_4G033460 Cucumis sativus L. HOM05D006014 ORTHO05D007608 3.0e-24 115.9 163 46.0
QL08p024005 Quercus lobata HOM05D006014 ORTHO05D007608 3.0e-24 115.9 182 43.4
Oeu051088.1 Olea europaea HOM05D006014 ORTHO05D007608 5.2e-24 115.2 103 60.2
RcHm_v2.0_Chr5g0032711 Rosa chinensis HOM05D006014 ORTHO05D007608 5.2e-24 115.2 166 47.0
Lj3g0022855 Lotus japonicus HOM05D006014 ORTHO05D007608 6.7e-24 114.8 148 49.3
FvH4_3g19430 Fragaria vesca HOM05D006014 ORTHO05D007608 8.8e-24 114.4 167 44.9
FAN11G2300 Fragaria x ananassa HOM05D006014 ORTHO05D007608 8.8e-24 114.4 167 44.9
FAN21G0470 Fragaria x ananassa HOM05D006014 ORTHO05D007608 8.8e-24 114.4 167 44.9
SalBow8G3070 Salvia bowleyana HOM05D006014 ORTHO05D007608 8.8e-24 114.4 102 58.8
Sed0004006 Sechium edule HOM05D006014 ORTHO05D007608 8.8e-24 114.4 158 45.6
TWI38G2086 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 1.1e-23 114.0 123 51.2
Migut.H01957 Erythranthe guttata HOM05D006014 ORTHO05D007608 2.0e-23 113.2 167 45.5
Ca_23028_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 2.6e-23 112.8 99 61.6
Ca_23030_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 2.6e-23 112.8 99 61.6
Cc05_g11740 Coffea canephora HOM05D006014 ORTHO05D007608 3.3e-23 112.5 150 48.7
Glyma.06G236200 Glycine max HOM05D006014 ORTHO05D007608 3.3e-23 112.5 103 60.2
MSTRG.12894 Avicennia marina HOM05D006014 ORTHO05D007608 4.4e-23 112.1 100 60.0
Actinidia35240 Actinidia chinensis HOM05D006014 ORTHO05D007608 5.7e-23 111.7 95 62.1
Glyma.12G162300 Glycine max HOM05D006014 ORTHO05D007608 5.7e-23 111.7 166 47.6
Peaxi162Scf00069g01737 Petunia axillaris HOM05D006014 ORTHO05D007608 5.7e-23 111.7 160 46.2
TAR624G0768 Trochodendron aralioides HOM05D006014 ORTHO05D007608 5.7e-23 111.7 117 52.1
PGSC0003DMG400012405 Solanum tuberosum HOM05D006014 ORTHO05D007608 9.7e-23 110.9 117 53.0
Lsat_1_v5_gn_5_128220 Lactuca sativa HOM05D006014 ORTHO05D007608 1.3e-22 110.5 107 56.1
ECA234G0345 Erigeron canadensis HOM05D006014 ORTHO05D007608 1.7e-22 110.2 107 57.0
Psat4g136440 Pisum sativum HOM05D006014 ORTHO05D007608 1.7e-22 110.2 105 57.1
Solyc07g062870.3 Solanum lycopersicum HOM05D006014 ORTHO05D007608 1.7e-22 110.2 187 43.3
Sopen07g031070 Solanum pennellii HOM05D006014 ORTHO05D007608 1.7e-22 110.2 187 43.3
TPR.G28172 Trifolium pratense HOM05D006014 ORTHO05D007608 1.7e-22 110.2 105 58.1
MBI07_g30170_MAGBIO Magnolia biondii HOM05D006014 ORTHO05D007608 2.2e-22 109.8 103 56.3
C05p52040 Brassica napus HOM05D006014 ORTHO05D007608 3.7e-22 109.0 116 51.7
Sed0026173 Sechium edule HOM05D006014 ORTHO05D007608 3.7e-22 109.0 96 58.3
AT3G15190 Arabidopsis thaliana HOM05D006014 ORTHO05D007608 4.8e-22 108.6 116 53.4
CDE10G0058 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 6.3e-22 108.2 103 57.3
CDE10G1292 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 6.3e-22 108.2 100 58.0
Nitab4.5_0013317g0010 Nicotiana tabacum HOM05D006014 ORTHO05D007608 6.3e-22 108.2 161 44.7
TWI39G1175 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 6.3e-22 108.2 123 48.8
BcaB06g29543 Brassica carinata HOM05D006014 ORTHO05D007608 8.2e-22 107.8 116 53.4
SEGI_01083 Sequoiadendron giganteum HOM05D006014 ORTHO05D007608 8.2e-22 107.8 99 58.6
Thhalv10021521m.g Eutrema salsugineum HOM05D006014 ORTHO05D007608 1.1e-21 107.5 116 51.7
Sp3g13400 Schrenkiella parvula HOM05D006014 ORTHO05D007608 1.1e-21 107.5 116 51.7
A05p34280 Brassica napus HOM05D006014 ORTHO05D007608 1.4e-21 107.1 116 53.4
BraA05t22249Z Brassica rapa HOM05D006014 ORTHO05D007608 1.4e-21 107.1 116 53.4
BcaB04g20944 Brassica carinata HOM05D006014 ORTHO05D007608 1.8e-21 106.7 130 46.9
Medtr8g061350 Medicago truncatula HOM05D006014 ORTHO05D007608 2.4e-21 106.3 103 56.3
Phvul.011G162800 Phaseolus vulgaris HOM05D006014 ORTHO05D007608 2.4e-21 106.3 159 45.9
C01p49380 Brassica napus HOM05D006014 ORTHO05D007608 3.1e-21 105.9 119 51.3
CARHR090180 Cardamine hirsuta HOM05D006014 ORTHO05D007608 3.1e-21 105.9 117 51.3
AUR62036161 Chenopodium quinoa HOM05D006014 ORTHO05D007608 3.1e-21 105.9 102 56.9
Aa31LG8G2390 Aethionema arabicum HOM05D006014 ORTHO05D007608 4.1e-21 105.5 123 47.2
BcaC01g03887 Brassica carinata HOM05D006014 ORTHO05D007608 4.1e-21 105.5 117 53.0
A01p38830 Brassica napus HOM05D006014 ORTHO05D007608 4.1e-21 105.5 115 51.3
A03p39200 Brassica napus HOM05D006014 ORTHO05D007608 4.1e-21 105.5 117 53.0
C03p47570 Brassica napus HOM05D006014 ORTHO05D007608 4.1e-21 105.5 117 53.0
BolC3t17032H Brassica oleracea HOM05D006014 ORTHO05D007608 4.1e-21 105.5 117 53.0
BraA01t03929Z Brassica rapa HOM05D006014 ORTHO05D007608 4.1e-21 105.5 115 51.3
PSO675G1148 Papaver somniferum HOM05D006014 ORTHO05D007608 4.1e-21 105.5 162 45.1
VMungo1127G0848 Vigna mungo HOM05D006014 ORTHO05D007608 4.1e-21 105.5 131 49.6
Carub.0003s1484 Capsella rubella HOM05D006014 ORTHO05D007608 5.3e-21 105.1 119 50.4
PSO541G1420 Papaver somniferum HOM05D006014 ORTHO05D007608 5.3e-21 105.1 155 46.5
Ah.06g184580 Amaranthus hybridus HOM05D006014 ORTHO05D007608 7.0e-21 104.8 105 53.3
Aqoxy1G02326 Aquilegia oxysepala HOM05D006014 ORTHO05D007608 7.0e-21 104.8 119 50.4
BolC1t04895H Brassica oleracea HOM05D006014 ORTHO05D007608 7.0e-21 104.8 119 51.3
BraA03t13069Z Brassica rapa HOM05D006014 ORTHO05D007608 7.0e-21 104.8 118 50.0
AagrBONN_evm.TU.Sc2ySwM_344.3794 Anthoceros agrestis HOM05D006014 ORTHO05D007608 9.1e-21 104.4 88 60.2
AL3G27580 Arabidopsis lyrata HOM05D006014 ORTHO05D007608 2.0e-20 103.2 117 49.6
HanXRQChr10g0302621 Helianthus annuus HOM05D006014 ORTHO05D007608 2.6e-20 102.8 101 54.5
AUR62019472 Chenopodium quinoa HOM05D006014 ORTHO05D007608 4.5e-20 102.1 181 41.4
THA.LOC104815561 Tarenaya hassleriana HOM05D006014 ORTHO05D007608 1.0e-19 100.9 159 44.0
Zm00001eb360330 Zea mays HOM05D006014 ORTHO05D007608 1.0e-19 100.9 92 59.8
Hund04492 Selenicereus undatus HOM05D006014 ORTHO05D007608 1.3e-19 100.5 170 41.8
ATR0737G141 Amborella trichopoda HOM05D006014 ORTHO05D007608 2.2e-19 99.8 101 52.5
Nitab4.5_0000332g0180 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.5e-18 97.1 121 48.8
Sc03g0010200 Simmondsia chinensis HOM05D006014 ORTHO05D007608 1.9e-18 96.7 105 54.3
Lj3g0017472 Lotus japonicus HOM05D006014 ORTHO05D007608 4.2e-18 95.5 99 52.5
Os01g0678600 Oryza sativa ssp. japonica HOM05D006014 ORTHO05D007608 7.2e-18 94.7 102 53.9
EL10Ac4g08237 Beta vulgaris HOM05D006014 ORTHO05D007608 1.6e-17 93.6 160 38.8
Rhsim04G0022600 Rhododendron simsii HOM05D006014 ORTHO05D007608 2.1e-17 93.2 103 53.4
Nitab4.5_0002330g0100 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.0e-16 90.9 177 39.5
arahy.Tifrunner.gnm1.ann1.FY4UJ9 Arachis hypogaea HOM05D006014 ORTHO05D007608 4.0e-16 89.0 193 35.2
SGA_v2.0_scaffold70G23686 Striga asiatica HOM05D006014 ORTHO05D007608 5.7e-15 85.1 74 59.5
Cre12.g494750 Chlamydomonas reinhardtii HOM05D006014 ORTHO05D007608 7.5e-15 84.7 98 48.0
arahy.Tifrunner.gnm1.ann1.QT5AN8 Arachis hypogaea HOM05D006014 ORTHO05D007608 1.8e-13 80.1 71 57.7
Lj8A154T77 Lonicera japonica HOM05D006014 ORTHO05D007608 5.4e-13 78.6 79 51.9
MCO10G118 Micromonas commoda HOM05D006014 ORTHO05D007608 5.9e-12 75.1 117 39.3
vmacro09523 Vaccinium macrocarpon HOM05D006014 ORTHO05D007608 1.1e-10 70.9 76 46.1
BcaC09g48477 Brassica carinata HOM05D006014 ORTHO05D007608 3.0e-08 62.8 64 53.1
Pp3c5_26800 Physcomitrium patens HOM05D006014 ORTHO05D007608 4.9e-06 55.5 79 41.8


User provided reference genes

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