Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 3.3e-178 628.2 319 100.0
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 7.3e-24 115.5 132 47.7
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 9.5e-24 115.2 116 50.9
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 9.5e-24 115.2 116 50.9
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 9.5e-24 115.2 116 50.9
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 1.2e-23 114.8 141 44.7
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 1.2e-23 114.8 141 44.7
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 1.6e-23 114.4 132 47.7
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 1.6e-23 114.4 132 45.5
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 1.6e-23 114.4 94 58.5
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 2.1e-23 114.0 116 50.0
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 2.1e-23 114.0 116 50.0
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 2.1e-23 114.0 116 50.0
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 2.1e-23 114.0 116 50.0
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 2.1e-23 114.0 137 45.3
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 2.1e-23 114.0 94 61.7
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 2.1e-23 114.0 132 46.2
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 3.6e-23 113.2 143 42.7
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 4.7e-23 112.8 111 50.5
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 4.7e-23 112.8 111 50.5
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 6.2e-23 112.5 116 49.1
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 6.2e-23 112.5 94 58.5
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 8.1e-23 112.1 94 57.4
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 1.1e-22 111.7 120 48.3
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 1.4e-22 111.3 141 44.0
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 1.4e-22 111.3 96 54.2
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 1.8e-22 110.9 94 57.4
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 1.8e-22 110.9 94 56.4
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 5.2e-22 109.4 114 50.0
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 5.2e-22 109.4 179 38.5
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 6.8e-22 109.0 139 44.6
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 1.2e-21 108.2 103 55.3
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 1.2e-21 108.2 103 55.3
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 1.2e-21 108.2 94 55.3
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 1.5e-21 107.8 94 55.3
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 1.5e-21 107.8 94 54.3
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 1.5e-21 107.8 94 55.3
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 1.5e-21 107.8 127 45.7
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 2.0e-21 107.5 85 58.8
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 2.6e-21 107.1 94 53.2
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 2.6e-21 107.1 121 44.6
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 2.6e-21 107.1 94 53.2
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 2.6e-21 107.1 94 53.2
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 2.6e-21 107.1 116 50.9
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 3.4e-21 106.7 94 53.2
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 3.4e-21 106.7 114 49.1
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 4.4e-21 106.3 94 53.2
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 4.4e-21 106.3 125 47.2
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 4.4e-21 106.3 103 49.5
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 4.4e-21 106.3 103 49.5
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 5.8e-21 105.9 94 53.2
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 7.5e-21 105.5 94 53.2
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 7.5e-21 105.5 85 56.5
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 9.8e-21 105.1 94 52.1
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 9.8e-21 105.1 85 55.3
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 9.8e-21 105.1 103 48.5
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 1.3e-20 104.8 94 51.1
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 1.3e-20 104.8 119 46.2
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 1.3e-20 104.8 94 52.1
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 1.3e-20 104.8 100 49.0
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 1.3e-20 104.8 119 47.9
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 1.3e-20 104.8 94 52.1
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.3e-20 104.8 85 56.5
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.3e-20 104.8 85 56.5
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 1.3e-20 104.8 85 56.5
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 1.3e-20 104.8 117 47.0
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 1.7e-20 104.4 96 53.1
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 1.7e-20 104.4 110 49.1
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 1.7e-20 104.4 140 42.9
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 1.7e-20 104.4 85 54.1
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 1.7e-20 104.4 94 51.1
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 1.7e-20 104.4 94 51.1
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 2.2e-20 104.0 101 51.5
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 2.9e-20 103.6 85 55.3
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 2.9e-20 103.6 85 55.3
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 3.7e-20 103.2 94 51.1
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 3.7e-20 103.2 94 51.1
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 4.9e-20 102.8 94 51.1
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 6.4e-20 102.4 85 51.8
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 6.4e-20 102.4 85 52.9
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 6.4e-20 102.4 93 50.5
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 8.3e-20 102.1 101 50.5
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 8.3e-20 102.1 101 50.5
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 8.3e-20 102.1 94 54.3
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 8.3e-20 102.1 118 45.8
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 1.1e-19 101.7 94 47.9
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.4e-19 101.3 94 54.3
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.4e-19 101.3 94 54.3
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.4e-19 101.3 94 54.3
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 1.4e-19 101.3 94 48.9
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 1.9e-19 100.9 94 53.2
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 1.9e-19 100.9 101 50.5
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 1.9e-19 100.9 127 42.5
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 1.9e-19 100.9 127 42.5
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 2.4e-19 100.5 103 50.5
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 3.2e-19 100.1 94 50.0
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 3.2e-19 100.1 103 51.5
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 3.2e-19 100.1 103 51.5
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 5.4e-19 99.4 85 54.1
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 1.2e-18 98.2 85 54.1
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 1.2e-18 98.2 85 55.3
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 4.6e-18 96.3 132 41.7
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 4.6e-18 96.3 110 44.5
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 7.8e-18 95.5 96 49.0
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 3.1e-14 83.6 62 56.5
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 1.3e-09 68.2 47 63.8
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 5.1e-09 66.2 55 56.4


User provided reference genes

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