Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g30330 Chara braunii HOM05D003679 ORTHO05D004265 0.0e+00 1565.8 906 100.0
CBR_g22378 Chara braunii HOM05D003679 ORTHO05D004265 2.8e-177 626.7 803 47.6
SMO361G0595 Selaginella moellendorffii HOM05D003679 ORTHO05D004265 1.2e-140 505.0 579 48.2
Mapoly0061s0106 Marchantia polymorpha HOM05D003679 ORTHO05D004265 5.6e-138 496.1 572 47.7
Pp3c9_3750 Physcomitrium patens HOM05D003679 ORTHO05D004265 2.1e-137 494.2 578 47.1
GSVIVG01037227001 Vitis vinifera HOM05D003679 ORTHO05D004265 1.2e-135 488.4 578 47.1
Actinidia29376 Actinidia chinensis HOM05D003679 ORTHO05D004265 2.0e-135 487.6 578 46.5
Dinv22115 Davidia involucrata HOM05D003679 ORTHO05D004265 3.4e-135 486.9 578 46.5
MD10G1003500 Malus domestica HOM05D003679 ORTHO05D004265 1.7e-134 484.6 577 46.3
ATR0602G033 Amborella trichopoda HOM05D003679 ORTHO05D004265 3.8e-134 483.4 579 46.6
CBR_g8679 Chara braunii HOM05D003679 ORTHO05D004265 4.9e-134 483.0 643 47.1
HPP92_006341 Vanilla planifolia HOM05D003679 ORTHO05D004265 4.9e-134 483.0 578 46.2
Dinv37407 Davidia involucrata HOM05D003679 ORTHO05D004265 6.4e-134 482.6 578 45.7
Nn1g04396 Nelumbo nucifera HOM05D003679 ORTHO05D004265 6.4e-134 482.6 542 48.0
DCAR_003511 Daucus carota HOM05D003679 ORTHO05D004265 1.1e-133 481.9 578 45.2
CSS0010343 Camellia sinensis var. sinensis HOM05D003679 ORTHO05D004265 1.9e-133 481.1 579 45.9
CSS0038034 Camellia sinensis var. sinensis HOM05D003679 ORTHO05D004265 1.9e-133 481.1 579 45.9
PSO063G5029 Papaver somniferum HOM05D003679 ORTHO05D004265 2.4e-133 480.7 577 45.6
Lj7C418G9 Lonicera japonica HOM05D003679 ORTHO05D004265 4.2e-133 479.9 592 45.4
MBI07_g03169_MAGBIO Magnolia biondii HOM05D003679 ORTHO05D004265 4.2e-133 479.9 564 46.5
TAR629G3435 Trochodendron aralioides HOM05D003679 ORTHO05D004265 5.5e-133 479.6 578 45.7
Cc10_g16340 Coffea canephora HOM05D003679 ORTHO05D004265 9.3e-133 478.8 578 46.4
MD05G1002800 Malus domestica HOM05D003679 ORTHO05D004265 1.2e-132 478.4 577 46.4
EL10Ac1g01279 Beta vulgaris HOM05D003679 ORTHO05D004265 2.1e-132 477.6 579 46.6
Hma1.2p1_0016F.1_g010780 Hydrangea macrophylla HOM05D003679 ORTHO05D004265 3.5e-132 476.9 579 45.1
PSO782G1226 Papaver somniferum HOM05D003679 ORTHO05D004265 4.6e-132 476.5 577 45.2
BcaB07g32282 Brassica carinata HOM05D003679 ORTHO05D004265 6.0e-132 476.1 577 45.8
BcaC03g15292 Brassica carinata HOM05D003679 ORTHO05D004265 7.9e-132 475.7 577 45.6
AUR62013388 Chenopodium quinoa HOM05D003679 ORTHO05D004265 7.9e-132 475.7 578 46.2
Sp5g26570 Schrenkiella parvula HOM05D003679 ORTHO05D004265 7.9e-132 475.7 577 45.2
Prupe.8G006100 Prunus persica HOM05D003679 ORTHO05D004265 1.0e-131 475.3 577 46.3
BolC6t39608H Brassica oleracea HOM05D003679 ORTHO05D004265 1.3e-131 474.9 577 45.6
Thecc.08G179800 Theobroma cacao HOM05D003679 ORTHO05D004265 1.3e-131 474.9 577 45.6
Sc23g0000050 Simmondsia chinensis HOM05D003679 ORTHO05D004265 1.8e-131 474.6 578 44.6
Lsat_1_v5_gn_1_1441 Lactuca sativa HOM05D003679 ORTHO05D004265 2.3e-131 474.2 577 45.9
BraA09t39677Z Brassica rapa HOM05D003679 ORTHO05D004265 3.0e-131 473.8 577 45.4
ClCG08G000780 Citrullus lanatus HOM05D003679 ORTHO05D004265 3.0e-131 473.8 578 45.7
PGR004G0725 Punica granatum HOM05D003679 ORTHO05D004265 3.0e-131 473.8 578 45.3
THA.LOC104809755 Tarenaya hassleriana HOM05D003679 ORTHO05D004265 3.0e-131 473.8 577 45.4
Carub.0001s2237 Capsella rubella HOM05D003679 ORTHO05D004265 3.9e-131 473.4 577 45.6
Ca_19809_v3 Cicer arietinum L. HOM05D003679 ORTHO05D004265 3.9e-131 473.4 577 44.9
Migut.C01386 Erythranthe guttata HOM05D003679 ORTHO05D004265 3.9e-131 473.4 578 45.3
Hund03114 Selenicereus undatus HOM05D003679 ORTHO05D004265 3.9e-131 473.4 581 46.3
AT1G22870 Arabidopsis thaliana HOM05D003679 ORTHO05D004265 6.7e-131 472.6 577 45.2
A02p17340 Brassica napus HOM05D003679 ORTHO05D004265 6.7e-131 472.6 578 45.5
BolC5t30892H Brassica oleracea HOM05D003679 ORTHO05D004265 6.7e-131 472.6 577 45.4
C05p21960 Brassica napus HOM05D003679 ORTHO05D004265 8.7e-131 472.2 577 45.4
C06p45570 Brassica napus HOM05D003679 ORTHO05D004265 8.7e-131 472.2 577 45.4
CARHR291300 Cardamine hirsuta HOM05D003679 ORTHO05D004265 8.7e-131 472.2 577 44.9
Carub.0002s1826 Capsella rubella HOM05D003679 ORTHO05D004265 1.1e-130 471.9 577 45.2
BraA07t31333Z Brassica rapa HOM05D003679 ORTHO05D004265 1.5e-130 471.5 578 45.3
Thhalv10018097m.g Eutrema salsugineum HOM05D003679 ORTHO05D004265 1.5e-130 471.5 577 45.1
Gorai.009G290500 Gossypium raimondii HOM05D003679 ORTHO05D004265 1.5e-130 471.5 578 45.3
Psat7g228040 Pisum sativum HOM05D003679 ORTHO05D004265 1.5e-130 471.5 573 45.5
C02p28990 Brassica napus HOM05D003679 ORTHO05D004265 1.9e-130 471.1 578 45.5
Gohir.D05G277500 Gossypium hirsutum HOM05D003679 ORTHO05D004265 1.9e-130 471.1 578 45.3
TPR.G34140 Trifolium pratense HOM05D003679 ORTHO05D004265 4.3e-130 469.9 577 44.7
CiPaw.03G013700 Carya illinoinensis HOM05D003679 ORTHO05D004265 5.6e-130 469.5 577 45.2
Ciclev10018760m.g Citrus clementina HOM05D003679 ORTHO05D004265 5.6e-130 469.5 578 44.6
VMungo1127G1022 Vigna mungo HOM05D003679 ORTHO05D004265 5.6e-130 469.5 577 44.5
Phvul.011G216200 Phaseolus vulgaris HOM05D003679 ORTHO05D004265 9.6e-130 468.8 577 44.2
QL09p001735 Quercus lobata HOM05D003679 ORTHO05D004265 1.3e-129 468.4 577 44.9
CARHR023220 Cardamine hirsuta HOM05D003679 ORTHO05D004265 1.6e-129 468.0 577 45.2
A09p41890 Brassica napus HOM05D003679 ORTHO05D004265 2.1e-129 467.6 578 45.3
THA.LOC104800081 Tarenaya hassleriana HOM05D003679 ORTHO05D004265 2.1e-129 467.6 577 44.9
Sed0026343 Sechium edule HOM05D003679 ORTHO05D004265 2.8e-129 467.2 788 39.1
BcaB05g24669 Brassica carinata HOM05D003679 ORTHO05D004265 3.7e-129 466.8 577 44.9
Sp1g20350 Schrenkiella parvula HOM05D003679 ORTHO05D004265 3.7e-129 466.8 577 45.1
CsaV3_5G039850 Cucumis sativus L. HOM05D003679 ORTHO05D004265 4.8e-129 466.5 578 45.2
Actinidia03530 Actinidia chinensis HOM05D003679 ORTHO05D004265 6.2e-129 466.1 795 38.2
Aa31LG4G9170 Aethionema arabicum HOM05D003679 ORTHO05D004265 6.2e-129 466.1 577 44.4
Lj3g0002271 Lotus japonicus HOM05D003679 ORTHO05D004265 6.2e-129 466.1 577 43.8
AL2G31070 Arabidopsis lyrata HOM05D003679 ORTHO05D004265 8.1e-129 465.7 577 44.5
CDE02G0262 Ceratophyllum demersum HOM05D003679 ORTHO05D004265 1.1e-128 465.3 577 44.5
HanXRQChr10g0298581 Helianthus annuus HOM05D003679 ORTHO05D004265 1.1e-128 465.3 793 39.3
Ah.05g170420 Amaranthus hybridus HOM05D003679 ORTHO05D004265 1.4e-128 464.9 609 44.3
Thhalv10006737m.g Eutrema salsugineum HOM05D003679 ORTHO05D004265 1.8e-128 464.5 577 44.7
AT1G71410 Arabidopsis thaliana HOM05D003679 ORTHO05D004265 2.4e-128 464.2 577 44.5
Aa31LG7G6860 Aethionema arabicum HOM05D003679 ORTHO05D004265 4.0e-128 463.4 819 38.1
Medtr4g030910 Medicago truncatula HOM05D003679 ORTHO05D004265 5.3e-128 463.0 577 44.5
CAN.G43.11 Capsicum annuum HOM05D003679 ORTHO05D004265 9.0e-128 462.2 579 44.0
Aqoxy4G00374 Aquilegia oxysepala HOM05D003679 ORTHO05D004265 1.5e-127 461.5 799 39.9
Glyma.12G241900 Glycine max HOM05D003679 ORTHO05D004265 1.5e-127 461.5 577 43.7
Lalb_Chr03g0033781 Lupinus albus HOM05D003679 ORTHO05D004265 2.0e-127 461.1 577 44.7
A07p37690 Brassica napus HOM05D003679 ORTHO05D004265 3.4e-127 460.3 812 37.9
Zm00001eb162090 Zea mays HOM05D003679 ORTHO05D004265 3.4e-127 460.3 1034 35.9
arahy.Tifrunner.gnm1.ann1.59G37Z Arachis hypogaea HOM05D003679 ORTHO05D004265 2.9e-126 457.2 863 36.8
CDE09G1378 Ceratophyllum demersum HOM05D003679 ORTHO05D004265 2.9e-126 457.2 794 37.4
Lalb_Chr19g0131861 Lupinus albus HOM05D003679 ORTHO05D004265 6.5e-126 456.1 577 44.0
arahy.Tifrunner.gnm1.ann1.AU4LT2 Arachis hypogaea HOM05D003679 ORTHO05D004265 8.4e-126 455.7 863 36.8
MSTRG.25498 Avicennia marina HOM05D003679 ORTHO05D004265 1.1e-125 455.3 578 44.1
Gorai.009G262900 Gossypium raimondii HOM05D003679 ORTHO05D004265 1.1e-125 455.3 578 44.5
Zm00001eb358200 Zea mays HOM05D003679 ORTHO05D004265 1.1e-125 455.3 862 36.2
FvH4_2g00710 Fragaria vesca HOM05D003679 ORTHO05D004265 1.4e-125 454.9 788 38.3
Gohir.D05G251500 Gossypium hirsutum HOM05D003679 ORTHO05D004265 1.4e-125 454.9 578 44.5
Gohir.A05G275400 Gossypium hirsutum HOM05D003679 ORTHO05D004265 1.9e-125 454.5 809 37.0
Potri.013G098700 Populus trichocarpa HOM05D003679 ORTHO05D004265 2.5e-125 454.1 803 37.0
FAN24G0047 Fragaria x ananassa HOM05D003679 ORTHO05D004265 3.2e-125 453.8 794 38.0
BraA02t06781Z Brassica rapa HOM05D003679 ORTHO05D004265 4.2e-125 453.4 822 37.3
Eucgr.F04075 Eucalyptus grandis HOM05D003679 ORTHO05D004265 4.2e-125 453.4 812 37.4
FAN27G2038 Fragaria x ananassa HOM05D003679 ORTHO05D004265 4.2e-125 453.4 794 37.9
TWI18G1229 Tripterygium wilfordii HOM05D003679 ORTHO05D004265 4.2e-125 453.4 578 44.5
BolC2t08949H Brassica oleracea HOM05D003679 ORTHO05D004265 2.1e-124 451.1 825 37.2
Gohir.A08G230600 Gossypium hirsutum HOM05D003679 ORTHO05D004265 2.7e-124 450.7 581 43.4
ECA247G4018 Erigeron canadensis HOM05D003679 ORTHO05D004265 7.9e-124 449.1 804 37.8
RcHm_v2.0_Chr6g0251091 Rosa chinensis HOM05D003679 ORTHO05D004265 7.9e-124 449.1 817 38.6
Glyma.09G002400 Glycine max HOM05D003679 ORTHO05D004265 1.0e-123 448.7 847 35.2
SGA_v2.0_scaffold118G32618 Striga asiatica HOM05D003679 ORTHO05D004265 1.0e-123 448.7 788 38.1
Gorai.004G267700 Gossypium raimondii HOM05D003679 ORTHO05D004265 1.8e-123 448.0 581 43.7
SalBow7G3862 Salvia bowleyana HOM05D003679 ORTHO05D004265 1.8e-123 448.0 799 37.4
FAN20G2916 Fragaria x ananassa HOM05D003679 ORTHO05D004265 3.0e-123 447.2 794 37.7
MELO3C022164.2 Cucumis melo HOM05D003679 ORTHO05D004265 6.7e-123 446.0 634 42.0
Gohir.D08G251000 Gossypium hirsutum HOM05D003679 ORTHO05D004265 6.7e-123 446.0 581 43.5
Manes.02G207300 Manihot esculenta HOM05D003679 ORTHO05D004265 1.1e-122 445.3 783 38.4
Sabra13G0083300 Salix brachista HOM05D003679 ORTHO05D004265 9.6e-122 442.2 629 40.5
Sabra13G0084600 Salix brachista HOM05D003679 ORTHO05D004265 9.6e-122 442.2 629 40.5
Oeu028929.2 Olea europaea HOM05D003679 ORTHO05D004265 1.6e-121 441.4 614 42.0
COL.COLO4_25139 Corchorus olitorius HOM05D003679 ORTHO05D004265 2.1e-121 441.0 818 37.0
MSTRG.1602 Avicennia marina HOM05D003679 ORTHO05D004265 3.7e-121 440.3 792 37.1
Gohir.A05G249800 Gossypium hirsutum HOM05D003679 ORTHO05D004265 4.1e-120 436.8 560 44.5
Duzib177G0004 Durio zibethinus HOM05D003679 ORTHO05D004265 1.2e-119 435.3 559 44.0
unitig_37.g13075 Utricularia gibba HOM05D003679 ORTHO05D004265 2.0e-119 434.5 803 36.5
TWI12G0838 Tripterygium wilfordii HOM05D003679 ORTHO05D004265 2.6e-119 434.1 572 43.5
Nitab4.5_0000213g0040 Nicotiana tabacum HOM05D003679 ORTHO05D004265 5.9e-119 433.0 586 42.5
Lj9C697G2 Lonicera japonica HOM05D003679 ORTHO05D004265 7.6e-119 432.6 637 41.0
Rhsim02G0172900 Rhododendron simsii HOM05D003679 ORTHO05D004265 1.7e-118 431.4 659 39.2
BcaC05g26193 Brassica carinata HOM05D003679 ORTHO05D004265 7.2e-117 426.0 577 42.6
FAN06G3813 Fragaria x ananassa HOM05D003679 ORTHO05D004265 6.1e-116 422.9 822 36.7
Sopen11g019340 Solanum pennellii HOM05D003679 ORTHO05D004265 7.9e-116 422.5 800 36.4
Solyc11g042990.2 Solanum lycopersicum HOM05D003679 ORTHO05D004265 3.0e-115 420.6 800 36.2
Haze_13962 Corylus avellana HOM05D003679 ORTHO05D004265 4.3e-114 416.8 604 41.4
Cpa.g.sc21.95 Carica papaya HOM05D003679 ORTHO05D004265 2.2e-113 414.5 745 38.1
FAN06G3180 Fragaria x ananassa HOM05D003679 ORTHO05D004265 2.2e-113 414.5 499 45.9
Peaxi162Scf00078g00824 Petunia axillaris HOM05D003679 ORTHO05D004265 1.8e-112 411.4 807 35.6
BcaNung06593 Brassica carinata HOM05D003679 ORTHO05D004265 1.1e-109 402.1 562 42.5
AUR62038539 Chenopodium quinoa HOM05D003679 ORTHO05D004265 1.0e-107 395.6 578 42.0
Nitab4.5_0001430g0030 Nicotiana tabacum HOM05D003679 ORTHO05D004265 1.8e-107 394.8 803 35.4
SGA_v2.0_scaffold24G10654 Striga asiatica HOM05D003679 ORTHO05D004265 4.8e-105 386.7 618 39.5
Oeu028634.1 Olea europaea HOM05D003679 ORTHO05D004265 7.9e-100 369.4 807 34.1
Nn1g09907 Nelumbo nucifera HOM05D003679 ORTHO05D004265 5.2e-99 366.7 454 43.4
Cfa008063 Carpinus fangiana HOM05D003679 ORTHO05D004265 5.7e-98 363.2 678 35.0
Pp3c15_10870 Physcomitrium patens HOM05D003679 ORTHO05D004265 5.5e-93 346.7 453 42.4
Cc02_g28270 Coffea canephora HOM05D003679 ORTHO05D004265 3.0e-91 340.9 465 43.0
Atru.chr13.2527 Acer truncatum HOM05D003679 ORTHO05D004265 4.8e-89 333.6 416 44.2
Os01g0616100 Oryza sativa ssp. japonica HOM05D003679 ORTHO05D004265 6.3e-81 306.6 822 31.9
Psat0s2790g0080 Pisum sativum HOM05D003679 ORTHO05D004265 4.9e-73 280.4 337 45.4
SEGI_13301 Sequoiadendron giganteum HOM05D003679 ORTHO05D004265 3.4e-66 257.7 336 42.9
Manes.18G113450 Manihot esculenta HOM05D003679 ORTHO05D004265 1.6e-63 248.8 378 39.4
vmacro11031 Vaccinium macrocarpon HOM05D003679 ORTHO05D004265 4.6e-63 247.3 339 41.0
SHI16836 Sapria himalayana HOM05D003679 ORTHO05D004265 7.5e-58 229.9 309 43.0
Oeu028930.1 Olea europaea HOM05D003679 ORTHO05D004265 3.4e-50 204.5 215 50.2
SEGI_07550 Sequoiadendron giganteum HOM05D003679 ORTHO05D004265 1.1e-45 189.5 160 58.8
Oeu028633.1 Olea europaea HOM05D003679 ORTHO05D004265 1.6e-44 185.7 430 34.0
MCO04G527 Micromonas commoda HOM05D003679 ORTHO05D004265 2.8e-44 184.9 622 27.7
PRCOL_00006428 Prasinoderma coloniale HOM05D003679 ORTHO05D004265 7.1e-40 170.2 625 27.5
vmacro11032 Vaccinium macrocarpon HOM05D003679 ORTHO05D004265 2.9e-33 148.3 410 28.5
Psat0s2790g0120 Pisum sativum HOM05D003679 ORTHO05D004265 5.4e-32 144.1 172 44.8
Psat0s4467g0040 Pisum sativum HOM05D003679 ORTHO05D004265 4.5e-26 124.4 127 55.1
SHI16839 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-23 114.4 206 37.9
Nn1g09117 Nelumbo nucifera HOM05D003679 ORTHO05D004265 4.9e-17 94.4 120 43.3
BcaB03g14900 Brassica carinata HOM05D003679 ORTHO05D004265 6.4e-17 94.0 120 42.5
BcaC08g46576 Brassica carinata HOM05D003679 ORTHO05D004265 4.2e-16 91.3 120 42.5
Duzib248G0388 Durio zibethinus HOM05D003679 ORTHO05D004265 2.1e-15 89.0 144 36.8
Duzib235G1025 Durio zibethinus HOM05D003679 ORTHO05D004265 1.1e-13 83.2 89 46.1
DCAR_021208 Daucus carota HOM05D003679 ORTHO05D004265 3.7e-12 78.2 73 52.1
Cre03.g206900 Chlamydomonas reinhardtii HOM05D003679 ORTHO05D004265 4.0e-11 74.7 817 20.6
FAN06G3504 Fragaria x ananassa HOM05D003679 ORTHO05D004265 7.6e-10 70.5 61 52.5
SEGI_25521 Sequoiadendron giganteum HOM05D003679 ORTHO05D004265 2.5e-08 65.5 80 46.2
Nn3g21334 Nelumbo nucifera HOM05D002338 ORTHO05D006102 7.1e-08 63.9 79 43.0
C05p57620 Brassica napus HOM05D003679 ORTHO05D004265 6.7e-06 57.4 87 39.1
BolC5t34419H Brassica oleracea HOM05D003679 ORTHO05D004265 6.7e-06 57.4 87 39.1


User provided reference genes

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