Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 9.9e-283 976.5 631 100.0
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 6.0e-38 163.3 246 41.9
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 7.9e-38 162.9 218 40.8
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 1.3e-37 162.2 217 45.6
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 2.3e-37 161.4 212 45.3
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 1.9e-36 158.3 214 44.9
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 3.3e-36 157.5 219 44.7
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 3.3e-36 157.5 214 43.0
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 7.4e-36 156.4 218 41.7
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 9.6e-36 156.0 214 43.5
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.3e-35 155.6 212 43.4
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 1.6e-35 155.2 214 43.5
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 2.8e-35 154.5 207 39.1
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 2.8e-35 154.5 210 41.9
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 2.8e-35 154.5 209 41.6
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 3.7e-35 154.1 215 42.3
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 4.8e-35 153.7 214 40.7
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 8.1e-35 152.9 211 41.2
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 1.8e-34 151.8 220 40.0
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 1.8e-34 151.8 215 41.9
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 1.8e-34 151.8 214 42.5
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 1.8e-34 151.8 221 40.7
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 1.8e-34 151.8 221 41.2
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 2.4e-34 151.4 219 41.6
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 2.4e-34 151.4 209 41.1
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 3.1e-34 151.0 207 41.1
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 3.1e-34 151.0 220 41.8
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 3.1e-34 151.0 217 39.6
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 4.0e-34 150.6 216 40.3
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 4.0e-34 150.6 219 41.6
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 4.0e-34 150.6 216 40.3
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 5.3e-34 150.2 218 41.3
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 1.2e-33 149.1 208 44.2
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 1.2e-33 149.1 210 40.0
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 1.2e-33 149.1 216 40.3
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 1.5e-33 148.7 213 39.0
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 1.5e-33 148.7 214 40.2
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 1.5e-33 148.7 210 42.4
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 2.0e-33 148.3 239 41.0
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 2.0e-33 148.3 209 41.1
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 2.0e-33 148.3 211 42.2
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 2.0e-33 148.3 211 37.9
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 2.6e-33 147.9 213 42.3
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.6e-33 147.9 222 41.4
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.6e-33 147.9 222 41.4
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 2.6e-33 147.9 211 38.9
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 2.6e-33 147.9 214 41.6
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 3.4e-33 147.5 210 41.0
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 3.4e-33 147.5 221 36.7
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 3.4e-33 147.5 214 40.2
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 4.5e-33 147.1 217 41.5
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 4.5e-33 147.1 213 40.8
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 7.6e-33 146.4 215 39.5
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 7.6e-33 146.4 214 40.2
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 7.6e-33 146.4 217 40.6
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 7.6e-33 146.4 213 41.3
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 7.6e-33 146.4 219 39.7
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.0e-32 146.0 210 40.5
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 1.0e-32 146.0 221 40.7
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 1.0e-32 146.0 212 42.5
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 1.3e-32 145.6 213 42.7
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 1.3e-32 145.6 209 43.1
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 1.3e-32 145.6 209 43.1
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 1.3e-32 145.6 211 39.3
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 1.7e-32 145.2 223 40.4
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 2.2e-32 144.8 211 38.4
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 2.9e-32 144.4 216 41.2
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 2.9e-32 144.4 221 37.6
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 2.9e-32 144.4 221 37.6
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 2.9e-32 144.4 219 38.8
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 3.8e-32 144.1 207 41.1
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 3.8e-32 144.1 211 41.2
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 3.8e-32 144.1 212 40.1
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 3.8e-32 144.1 260 37.3
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 4.9e-32 143.7 212 39.6
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 4.9e-32 143.7 223 40.8
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 6.5e-32 143.3 212 40.1
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 8.4e-32 142.9 210 39.0
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.1e-31 142.5 204 37.7
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 1.4e-31 142.1 214 40.7
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 1.4e-31 142.1 213 39.9
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 1.9e-31 141.7 217 39.6
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 1.9e-31 141.7 216 38.4
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 3.2e-31 141.0 225 38.7
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 3.2e-31 141.0 208 40.9
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 5.5e-31 140.2 209 43.1
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 7.1e-31 139.8 240 38.8
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 7.1e-31 139.8 236 38.1
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 1.2e-30 139.0 234 38.0
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.6e-30 138.7 210 39.5
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.6e-30 138.7 215 39.1
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 3.5e-30 137.5 226 38.1
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 1.3e-29 135.6 208 39.4
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 1.8e-29 135.2 226 37.6
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 2.3e-29 134.8 213 39.4
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 3.9e-29 134.0 210 35.7
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 8.7e-29 132.9 213 39.9
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.5e-28 132.1 199 39.2
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 3.3e-28 131.0 200 39.0
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 6.3e-27 126.7 198 36.9
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 2.0e-25 121.7 181 40.9
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 3.4e-25 120.9 201 37.8
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 2.2e-24 118.2 204 36.8
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 5.5e-23 113.6 203 36.0
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 5.5e-23 113.6 211 36.0
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 7.2e-23 113.2 194 36.1
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 7.2e-23 113.2 189 36.0
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.6e-19 102.1 213 33.3
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 2.2e-19 101.7 251 29.1
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 3.8e-16 90.9 90 52.2
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 1.4e-15 89.0 169 34.9
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 2.2e-08 65.1 49 59.2
PRCOL_00004793 Prasinoderma coloniale HOM05D002428 ORTHO05D008664 3.8e-08 64.3 148 29.7
Cre19.g750397 Chlamydomonas reinhardtii HOM05D002428 ORTHO05D008664 2.7e-06 58.2 146 33.6
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 3.6e-06 57.8 151 29.8


User provided reference genes

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