Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g30241 Chara braunii HOM05D005241 ORTHO05D005862 3.1e-276 954.5 487 100.0
AagrBONN_evm.TU.Sc2ySwM_228.5641 Anthoceros agrestis HOM05D005241 ORTHO05D005862 3.5e-17 94.0 313 27.2
CBR_g30152 Chara braunii HOM05D010403 ORTHO05D005862 3.2e-15 87.4 196 31.6
Hund09015 Selenicereus undatus HOM05D005241 ORTHO05D005862 2.7e-14 84.3 303 27.4
PSO135G0552 Papaver somniferum HOM05D005241 ORTHO05D005862 8.8e-13 79.3 346 26.0
PSO135G0726 Papaver somniferum HOM05D005241 ORTHO05D005862 2.6e-12 77.8 309 26.9
VMungo1215G3242 Vigna mungo HOM05D005241 ORTHO05D005862 3.4e-12 77.4 295 26.4
PSO384G2580 Papaver somniferum HOM05D005241 ORTHO05D005862 5.7e-12 76.6 318 26.4
Psat4g010800 Pisum sativum HOM05D005241 ORTHO05D005862 5.7e-12 76.6 318 25.8
A03p12620 Brassica napus HOM05D005241 ORTHO05D005862 7.5e-12 76.3 306 26.5
Dinv41292 Davidia involucrata HOM05D005241 ORTHO05D005862 9.8e-12 75.9 312 26.6
Ca_21190_v3 Cicer arietinum L. HOM05D005241 ORTHO05D005862 1.3e-11 75.5 312 26.0
Aqoxy4G03021 Aquilegia oxysepala HOM05D005241 ORTHO05D005862 2.2e-11 74.7 318 25.5
BraA03t10577Z Brassica rapa HOM05D005241 ORTHO05D005862 2.8e-11 74.3 306 26.5
AUR62040288 Chenopodium quinoa HOM05D005241 ORTHO05D005862 2.8e-11 74.3 301 26.6
PGR102G1178 Punica granatum HOM05D005241 ORTHO05D005862 3.7e-11 73.9 312 27.6
Sp6g19390 Schrenkiella parvula HOM05D005241 ORTHO05D005862 3.7e-11 73.9 306 26.1
vmacro13085 Vaccinium macrocarpon HOM05D005241 ORTHO05D005862 3.7e-11 73.9 295 26.4
Actinidia24021 Actinidia chinensis HOM05D005241 ORTHO05D005862 6.3e-11 73.2 294 25.9
C03p14830 Brassica napus HOM05D005241 ORTHO05D005862 8.3e-11 72.8 306 26.1
Phvul.003G150000 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 8.3e-11 72.8 295 26.4
COL.COLO4_16080 Corchorus olitorius HOM05D005241 ORTHO05D005862 1.1e-10 72.4 306 26.1
QL02p096102 Quercus lobata HOM05D005241 ORTHO05D005862 1.1e-10 72.4 361 24.1
SEGI_10163 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 1.1e-10 72.4 307 25.4
Lj9A730T54 Lonicera japonica HOM05D005241 ORTHO05D005862 1.4e-10 72.0 312 25.6
EL10Ac8g18255 Beta vulgaris HOM05D005241 ORTHO05D005862 1.8e-10 71.6 301 25.9
CSS0029475 Camellia sinensis var. sinensis HOM05D005241 ORTHO05D005862 1.8e-10 71.6 312 26.0
Atru.chr7.554 Acer truncatum HOM05D005241 ORTHO05D005862 2.4e-10 71.2 309 24.3
Peaxi162Scf00078g00547 Petunia axillaris HOM05D005241 ORTHO05D005862 2.4e-10 71.2 293 27.3
arahy.Tifrunner.gnm1.ann1.4YP8RP Arachis hypogaea HOM05D005241 ORTHO05D005862 3.1e-10 70.9 352 23.9
arahy.Tifrunner.gnm1.ann1.RWXM46 Arachis hypogaea HOM05D005241 ORTHO05D005862 3.1e-10 70.9 323 25.1
Gorai.010G053100 Gossypium raimondii HOM05D005241 ORTHO05D005862 3.1e-10 70.9 303 25.4
Lalb_Chr07g0180171 Lupinus albus HOM05D005241 ORTHO05D005862 3.1e-10 70.9 318 25.2
Sc08g0005390 Simmondsia chinensis HOM05D005241 ORTHO05D005862 3.1e-10 70.9 145 33.8
BolC3t13925H Brassica oleracea HOM05D005241 ORTHO05D005862 4.1e-10 70.5 303 25.4
ECA236G3445 Erigeron canadensis HOM05D005241 ORTHO05D005862 4.1e-10 70.5 303 25.1
Sopen12g007320 Solanum pennellii HOM05D005241 ORTHO05D005862 4.1e-10 70.5 312 26.9
Haze_22151 Corylus avellana HOM05D005241 ORTHO05D005862 5.4e-10 70.1 353 24.1
Solyc12g014440.2 Solanum lycopersicum HOM05D005241 ORTHO05D005862 5.4e-10 70.1 312 26.9
THA.LOC104813533 Tarenaya hassleriana HOM05D005241 ORTHO05D005862 5.4e-10 70.1 309 24.6
TWI34G0564 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 5.4e-10 70.1 303 26.1
COL.COLO4_16078 Corchorus olitorius HOM05D005241 ORTHO05D005862 7.0e-10 69.7 306 24.5
Gohir.D06G047501 Gossypium hirsutum HOM05D005241 ORTHO05D005862 7.0e-10 69.7 303 25.4
PSO384G1775 Papaver somniferum HOM05D005241 ORTHO05D005862 7.0e-10 69.7 315 26.0
TWI34G1734 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 7.0e-10 69.7 303 26.1
Medtr4g129200 Medicago truncatula HOM05D005241 ORTHO05D005862 9.1e-10 69.3 323 25.1
HPP92_013485 Vanilla planifolia HOM05D005241 ORTHO05D005862 9.1e-10 69.3 318 25.5
Gohir.A06G047300 Gossypium hirsutum HOM05D005241 ORTHO05D005862 1.2e-09 68.9 303 25.4
Oeu043521.1 Olea europaea HOM05D005241 ORTHO05D005862 1.2e-09 68.9 312 24.7
Peaxi162Scf00339g00098 Petunia axillaris HOM05D005241 ORTHO05D005862 1.2e-09 68.9 159 35.2
TAR629G1464 Trochodendron aralioides HOM05D005241 ORTHO05D005862 1.2e-09 68.9 297 26.9
DCAR_014714 Daucus carota HOM05D005241 ORTHO05D005862 1.6e-09 68.6 312 26.9
HanXRQChr06g0178861 Helianthus annuus HOM05D005241 ORTHO05D005862 1.6e-09 68.6 294 24.8
TPR.G5349 Trifolium pratense HOM05D005241 ORTHO05D005862 1.6e-09 68.6 323 25.1
MBI18_g28946_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 2.0e-09 68.2 303 25.4
Phvul.003G150200 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 2.0e-09 68.2 306 25.8
Ciclev10008429m.g Citrus clementina HOM05D005241 ORTHO05D005862 2.7e-09 67.8 133 34.6
SGA_v2.0_scaffold66G22503 Striga asiatica HOM05D005241 ORTHO05D005862 2.7e-09 67.8 292 24.3
Aa31LG3G13540 Aethionema arabicum HOM05D005241 ORTHO05D005862 3.5e-09 67.4 303 25.4
Lsat_1_v5_gn_8_65460 Lactuca sativa HOM05D005241 ORTHO05D005862 4.5e-09 67.0 297 25.6
Medtr4g129180 Medicago truncatula HOM05D005241 ORTHO05D005862 4.5e-09 67.0 144 33.3
PGSC0003DMG400012851 Solanum tuberosum HOM05D005241 ORTHO05D005862 4.5e-09 67.0 196 29.6
ATR0796G313 Amborella trichopoda HOM05D005241 ORTHO05D005862 5.9e-09 66.6 303 25.1
Cc06_g13790 Coffea canephora HOM05D005241 ORTHO05D005862 5.9e-09 66.6 316 24.7
FAN07G2217 Fragaria x ananassa HOM05D005241 ORTHO05D005862 5.9e-09 66.6 295 26.8
Lj4g0014860 Lotus japonicus HOM05D005241 ORTHO05D005862 5.9e-09 66.6 294 25.9
PSO135G0092 Papaver somniferum HOM05D005241 ORTHO05D005862 5.9e-09 66.6 142 33.1
Rhsim01G0009500 Rhododendron simsii HOM05D005241 ORTHO05D005862 5.9e-09 66.6 303 25.7
MSTRG.19688 Avicennia marina HOM05D005241 ORTHO05D005862 7.7e-09 66.2 283 25.4
Thhalv10013983m.g Eutrema salsugineum HOM05D005241 ORTHO05D005862 7.7e-09 66.2 297 24.9
Os07g0516000 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 7.7e-09 66.2 312 25.6
Thecc.09G163700 Theobroma cacao HOM05D005241 ORTHO05D005862 1.0e-08 65.9 143 32.9
unitig_0.g567 Utricularia gibba HOM05D005241 ORTHO05D005862 1.0e-08 65.9 282 24.1
CARHR271450 Cardamine hirsuta HOM05D005241 ORTHO05D005862 1.3e-08 65.5 295 25.1
FAN17G0752 Fragaria x ananassa HOM05D005241 ORTHO05D005862 1.3e-08 65.5 295 26.4
Manes.06G028800 Manihot esculenta HOM05D005241 ORTHO05D005862 1.3e-08 65.5 285 25.3
Glyma.13G092800 Glycine max HOM05D005241 ORTHO05D005862 1.7e-08 65.1 318 24.2
Glyma.17G067600 Glycine max HOM05D005241 ORTHO05D005862 1.7e-08 65.1 135 33.3
Thecc.09G163500 Theobroma cacao HOM05D005241 ORTHO05D005862 1.7e-08 65.1 306 24.2
TPR.G5299 Trifolium pratense HOM05D005241 ORTHO05D005862 1.7e-08 65.1 139 33.8
Os07g0516050 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 2.3e-08 64.7 304 23.4
FvH4_4g09810 Fragaria vesca HOM05D005241 ORTHO05D005862 2.9e-08 64.3 295 26.4
FAN12G0682 Fragaria x ananassa HOM05D005241 ORTHO05D005862 2.9e-08 64.3 295 26.4
Psat4g010840 Pisum sativum HOM05D005241 ORTHO05D005862 2.9e-08 64.3 142 32.4
Potri.018G097100 Populus trichocarpa HOM05D005241 ORTHO05D005862 2.9e-08 64.3 133 32.3
ClCG06G012960 Citrullus lanatus HOM05D005241 ORTHO05D005862 3.8e-08 63.9 264 26.1
Lalb_Chr07g0180161 Lupinus albus HOM05D005241 ORTHO05D005862 3.8e-08 63.9 328 23.5
Nn7g37052 Nelumbo nucifera HOM05D005241 ORTHO05D005862 3.8e-08 63.9 297 25.3
AUR62039979 Chenopodium quinoa HOM05D005241 ORTHO05D005862 5.0e-08 63.5 114 36.0
Glyma.13G092900 Glycine max HOM05D005241 ORTHO05D005862 6.5e-08 63.2 126 34.1
CDE10G0441 Ceratophyllum demersum HOM05D005241 ORTHO05D005862 1.5e-07 62.0 142 31.7
Sabra18G0084300 Salix brachista HOM05D005241 ORTHO05D005862 1.5e-07 62.0 157 30.6
Gohir.A05G345818 Gossypium hirsutum HOM05D005241 ORTHO05D005862 1.9e-07 61.6 143 30.8
SalBow6G2671 Salvia bowleyana HOM05D005241 ORTHO05D005862 1.9e-07 61.6 142 31.0
SalBow6G2881 Salvia bowleyana HOM05D005241 ORTHO05D005862 1.9e-07 61.6 142 31.0
HPP92_026039 Vanilla planifolia HOM05D005241 ORTHO05D005862 1.9e-07 61.6 142 31.7
Zm00001eb105960 Zea mays HOM05D005241 ORTHO05D005862 3.3e-07 60.8 281 26.0
Pp3c3_37310 Physcomitrium patens HOM05D005241 ORTHO05D005862 5.5e-07 60.1 138 31.9
Gorai.012G095700 Gossypium raimondii HOM05D005241 ORTHO05D005862 7.2e-07 59.7 143 30.8
Dinv42767 Davidia involucrata HOM05D005241 ORTHO05D005862 9.5e-07 59.3 308 25.3
Dinv43336 Davidia involucrata HOM05D005241 ORTHO05D005862 9.5e-07 59.3 308 25.3
Migut.J01437 Erythranthe guttata HOM05D005241 ORTHO05D005862 9.5e-07 59.3 143 29.4
Zm00001eb105910 Zea mays HOM05D005241 ORTHO05D005862 9.5e-07 59.3 288 22.9
EL10Ac7g17876 Beta vulgaris HOM05D005241 ORTHO05D005862 1.2e-06 58.9 155 29.0
Duzib150G1634 Durio zibethinus HOM05D005241 ORTHO05D005862 1.2e-06 58.9 135 31.1
AL8G33730 Arabidopsis lyrata HOM05D005241 ORTHO05D005862 1.6e-06 58.5 136 30.9
CiPaw.07G187700 Carya illinoinensis HOM05D005241 ORTHO05D005862 1.6e-06 58.5 135 30.4
SEGI_04095 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 1.6e-06 58.5 133 28.6
RcHm_v2.0_Chr4g0404611 Rosa chinensis HOM05D005241 ORTHO05D005862 3.6e-06 57.4 81 39.5
AT5G57700 Arabidopsis thaliana HOM05D005241 ORTHO05D005862 4.7e-06 57.0 136 30.9
CANSAT11G2449 Cannabis sativa HOM05D005241 ORTHO05D005862 4.7e-06 57.0 203 26.6
Eucgr.C02440 Eucalyptus grandis HOM05D005241 ORTHO05D005862 4.7e-06 57.0 304 25.3
Hma1.2p1_0921F.1_g236680 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 6.1e-06 56.6 93 36.6
Hma1.2p1_2604F.1_g325280 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 6.1e-06 56.6 93 36.6


User provided reference genes

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