Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 7.6e-204 713.8 401 100.0
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 1.7e-38 164.5 326 31.9
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 7.2e-37 159.1 312 30.4
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 1.8e-27 127.9 217 34.1
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 5.7e-26 122.9 278 29.1
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 9.8e-26 122.1 311 23.5
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 4.9e-25 119.8 296 26.7
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 4.9e-25 119.8 283 26.5
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 2.4e-24 117.5 287 27.2
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 2.0e-23 114.4 327 26.3
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 2.0e-23 114.4 300 26.7
SMO202G0041 Selaginella moellendorffii HOM05D005247 ORTHO05D006571 1.0e-22 112.1 250 29.6
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.3e-22 111.7 317 25.6
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 1.7e-22 111.3 326 25.5
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 2.3e-22 110.9 284 26.4
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 2.9e-22 110.5 274 27.4
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 2.9e-22 110.5 316 26.6
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 2.9e-22 110.5 292 27.4
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.8e-22 110.2 322 25.2
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 3.8e-22 110.2 297 22.9
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 6.6e-22 109.4 310 25.5
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 8.6e-22 109.0 295 26.8
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 1.1e-21 108.6 281 26.3
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.1e-21 108.6 316 25.3
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 1.1e-21 108.6 284 26.8
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 1.5e-21 108.2 351 23.9
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 1.9e-21 107.8 298 27.5
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 1.9e-21 107.8 349 25.8
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.9e-21 107.8 316 25.9
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 1.9e-21 107.8 292 25.3
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 2.5e-21 107.5 330 24.8
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 4.3e-21 106.7 310 24.8
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 4.3e-21 106.7 284 26.4
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 7.3e-21 105.9 327 24.2
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 7.3e-21 105.9 287 25.1
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 7.3e-21 105.9 346 23.4
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 9.5e-21 105.5 280 25.7
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 1.2e-20 105.1 313 25.6
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 1.2e-20 105.1 315 25.1
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 1.6e-20 104.8 270 27.4
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 1.6e-20 104.8 334 24.0
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 2.1e-20 104.4 310 25.8
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 2.1e-20 104.4 296 25.7
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 2.8e-20 104.0 280 25.7
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 2.8e-20 104.0 273 25.6
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 2.8e-20 104.0 280 25.0
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 2.8e-20 104.0 360 22.8
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 2.8e-20 104.0 349 25.2
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 2.8e-20 104.0 339 23.6
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 2.8e-20 104.0 314 24.8
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 3.6e-20 103.6 362 24.9
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 3.6e-20 103.6 274 27.7
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 3.6e-20 103.6 303 23.8
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 4.7e-20 103.2 284 26.4
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 6.1e-20 102.8 272 26.1
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 8.0e-20 102.4 308 25.0
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 8.0e-20 102.4 343 24.8
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 1.4e-19 101.7 279 26.2
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 1.4e-19 101.7 327 23.5
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 1.8e-19 101.3 284 25.0
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 1.8e-19 101.3 304 24.3
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 1.8e-19 101.3 299 23.7
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.8e-19 101.3 290 26.6
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 1.8e-19 101.3 305 23.3
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 1.8e-19 101.3 287 24.7
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 2.3e-19 100.9 283 23.3
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 3.0e-19 100.5 283 25.1
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 4.0e-19 100.1 278 27.0
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 4.0e-19 100.1 283 25.1
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 4.0e-19 100.1 296 22.0
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 6.8e-19 99.4 297 23.9
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 6.8e-19 99.4 308 24.4
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 6.8e-19 99.4 304 23.7
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 8.9e-19 99.0 283 26.9
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 1.2e-18 98.6 280 25.4
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 1.5e-18 98.2 315 24.1
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 1.5e-18 98.2 283 24.7
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 2.0e-18 97.8 349 22.6
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 2.0e-18 97.8 283 25.4
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 2.0e-18 97.8 305 24.6
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 2.0e-18 97.8 285 27.4
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 2.6e-18 97.4 315 24.1
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 2.6e-18 97.4 304 23.7
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 2.6e-18 97.4 315 24.1
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 3.4e-18 97.1 273 25.3
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 3.4e-18 97.1 282 26.2
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 4.4e-18 96.7 301 23.9
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 4.4e-18 96.7 284 25.7
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 4.4e-18 96.7 283 23.7
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 5.7e-18 96.3 319 23.8
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 5.7e-18 96.3 284 23.9
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 5.7e-18 96.3 342 24.0
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 9.8e-18 95.5 284 23.9
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 2.2e-17 94.4 215 26.5
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 2.9e-17 94.0 277 24.2
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 4.9e-17 93.2 307 21.5
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 1.1e-16 92.0 284 25.0
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 1.4e-16 91.7 303 24.1
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 3.2e-16 90.5 283 23.0
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 3.2e-16 90.5 213 25.8
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 4.1e-16 90.1 318 23.9
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 3.5e-15 87.0 273 24.9
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 1.3e-14 85.1 345 21.4
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 3.9e-14 83.6 245 24.1
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 1.1e-13 82.0 139 33.1
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.9e-13 81.3 204 26.5
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.9e-13 81.3 309 24.3
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 2.5e-13 80.9 299 22.4
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 5.6e-13 79.7 197 25.9
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 2.1e-12 77.8 235 23.8
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 4.7e-12 76.6 168 29.2
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 6.2e-12 76.3 211 23.2
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 8.0e-12 75.9 157 29.3
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 1.4e-11 75.1 344 20.9
Pp3c14_7470 Physcomitrium patens HOM05D005247 ORTHO05D006571 4.4e-10 70.1 319 21.9
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 7.5e-10 69.3 145 27.6
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 2.9e-09 67.4 167 23.4
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 1.1e-08 65.5 142 26.8
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 1.9e-08 64.7 318 21.4


User provided reference genes

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