Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 4.2e-159 565.5 507 100.0
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 4.1e-21 107.1 149 43.0
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 7.0e-21 106.3 150 39.3
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 9.2e-21 105.9 149 40.9
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 2.7e-20 104.4 150 42.0
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 4.6e-20 103.6 150 39.3
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 7.8e-20 102.8 149 38.3
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 7.8e-20 102.8 151 38.4
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 1.0e-19 102.4 149 43.0
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 1.3e-19 102.1 150 41.3
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 1.7e-19 101.7 151 39.7
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 1.7e-19 101.7 149 38.9
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 3.0e-19 100.9 152 36.2
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 3.9e-19 100.5 156 37.2
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 3.9e-19 100.5 150 38.0
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 3.9e-19 100.5 152 38.8
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 5.0e-19 100.1 150 38.7
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 5.0e-19 100.1 146 39.0
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 8.6e-19 99.4 152 36.2
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 8.6e-19 99.4 156 37.8
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 8.6e-19 99.4 147 36.7
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 8.6e-19 99.4 149 38.3
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 8.6e-19 99.4 150 37.3
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 1.1e-18 99.0 152 36.8
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 1.1e-18 99.0 149 39.6
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.1e-18 99.0 149 39.6
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 1.5e-18 98.6 150 40.7
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 1.5e-18 98.6 153 38.6
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 1.9e-18 98.2 149 38.3
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 3.3e-18 97.4 150 38.7
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 3.3e-18 97.4 155 38.1
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 4.3e-18 97.1 149 38.3
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 4.3e-18 97.1 149 38.3
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 4.3e-18 97.1 146 38.4
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 5.6e-18 96.7 149 37.6
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 5.6e-18 96.7 149 37.6
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 5.6e-18 96.7 149 37.6
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 5.6e-18 96.7 146 38.4
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 7.3e-18 96.3 159 36.5
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 7.3e-18 96.3 146 39.7
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 7.3e-18 96.3 162 36.4
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 7.3e-18 96.3 149 40.3
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 9.5e-18 95.9 150 39.3
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 9.5e-18 95.9 152 36.8
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 1.2e-17 95.5 150 37.3
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 1.2e-17 95.5 156 37.2
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 1.2e-17 95.5 159 37.1
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 1.2e-17 95.5 150 38.7
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 1.6e-17 95.1 149 36.9
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 1.6e-17 95.1 149 36.9
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 1.6e-17 95.1 146 37.7
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.6e-17 95.1 162 36.4
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 2.1e-17 94.7 153 37.3
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 2.1e-17 94.7 143 37.8
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 2.8e-17 94.4 151 37.7
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 2.8e-17 94.4 143 37.8
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 2.8e-17 94.4 150 36.0
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 2.8e-17 94.4 150 38.7
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 4.7e-17 93.6 151 35.8
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 4.7e-17 93.6 150 38.0
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 6.2e-17 93.2 150 38.7
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 6.2e-17 93.2 150 38.7
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 8.0e-17 92.8 149 38.9
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 1.0e-16 92.4 149 37.6
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.0e-16 92.4 150 38.7
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 1.4e-16 92.0 175 35.4
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.4e-16 92.0 149 35.6
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.4e-16 92.0 146 38.4
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 1.4e-16 92.0 167 34.7
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 1.8e-16 91.7 149 37.6
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 1.8e-16 91.7 149 37.6
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 2.3e-16 91.3 149 36.9
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 2.3e-16 91.3 150 36.7
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 2.3e-16 91.3 150 38.7
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 3.1e-16 90.9 156 36.5
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 3.1e-16 90.9 146 38.4
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 4.0e-16 90.5 150 36.7
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 4.0e-16 90.5 151 35.8
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 4.0e-16 90.5 150 36.7
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 5.2e-16 90.1 146 37.0
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 6.8e-16 89.7 150 36.7
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 6.8e-16 89.7 145 37.2
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 6.8e-16 89.7 149 37.6
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 8.9e-16 89.4 131 38.2
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 8.9e-16 89.4 151 37.1
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 1.2e-15 89.0 183 33.9
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 1.5e-15 88.6 157 35.7
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 3.4e-15 87.4 150 36.0
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 4.4e-15 87.0 150 37.3
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 5.8e-15 86.7 142 36.6
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 6.4e-14 83.2 151 36.4
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.1e-13 82.4 128 33.6
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 1.9e-13 81.6 156 32.7
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 3.2e-13 80.9 183 32.8
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 3.5e-12 77.4 159 34.0
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 4.6e-12 77.0 137 38.7
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 7.8e-12 76.3 86 40.7
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 3.0e-11 74.3 113 35.4
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 5.0e-11 73.6 72 48.6
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 7.5e-07 59.7 114 34.2


User provided reference genes

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