Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 0.0e+00 2054.3 1170 100.0
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 1.1e-183 648.3 1043 42.0
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 1.8e-181 641.0 1022 41.9
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 7.4e-175 619.0 549 59.7
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 2.5e-170 604.0 549 58.1
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 2.7e-169 600.5 985 40.5
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 4.1e-165 586.6 548 54.6
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 5.0e-163 579.7 550 55.6
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 6.5e-163 579.3 547 55.6
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 1.1e-162 578.6 549 54.8
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 1.5e-162 578.2 548 55.5
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 5.5e-162 576.2 549 54.5
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 4.7e-161 573.2 548 54.9
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 1.0e-160 572.0 548 55.1
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 1.8e-160 571.2 547 54.3
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 3.0e-160 570.5 544 54.6
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 3.0e-160 570.5 547 54.3
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 2.6e-159 567.4 547 55.0
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 5.7e-159 566.2 545 54.1
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 5.7e-159 566.2 549 53.6
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 7.5e-159 565.8 556 53.6
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 7.5e-159 565.8 547 54.8
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 7.5e-159 565.8 546 52.6
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 9.8e-159 565.5 546 54.8
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 9.8e-159 565.5 547 53.9
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 9.8e-159 565.5 552 53.3
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 1.3e-158 565.1 548 53.6
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 1.3e-158 565.1 547 54.7
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 1.7e-158 564.7 549 54.6
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 2.2e-158 564.3 564 52.7
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 2.2e-158 564.3 547 54.3
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 2.8e-158 563.9 547 53.7
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.8e-158 563.9 547 53.0
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 3.7e-158 563.5 546 54.4
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 3.7e-158 563.5 561 53.1
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 1.1e-157 562.0 548 54.4
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 1.4e-157 561.6 547 54.1
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 2.4e-157 560.8 547 53.7
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 2.4e-157 560.8 508 56.7
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 3.1e-157 560.5 547 54.3
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 5.4e-157 559.7 545 52.3
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 7.0e-157 559.3 552 53.3
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 9.1e-157 558.9 549 53.7
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 9.1e-157 558.9 549 53.7
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 1.2e-156 558.5 549 52.8
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 1.2e-156 558.5 547 53.7
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 1.6e-156 558.1 547 53.7
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 3.5e-156 557.0 547 54.3
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 4.5e-156 556.6 549 53.0
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 5.9e-156 556.2 549 53.4
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 5.9e-156 556.2 549 52.5
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 1.0e-155 555.4 547 53.9
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 1.3e-155 555.1 548 52.9
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 1.7e-155 554.7 546 54.2
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 2.2e-155 554.3 517 55.7
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 2.2e-155 554.3 547 54.1
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 2.2e-155 554.3 546 53.8
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 2.9e-155 553.9 549 52.8
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 3.8e-155 553.5 555 54.2
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 3.8e-155 553.5 559 54.0
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 8.5e-155 552.4 553 54.4
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 8.5e-155 552.4 559 53.7
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 1.1e-154 552.0 551 53.5
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 1.5e-154 551.6 548 54.9
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 1.5e-154 551.6 548 52.4
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 1.5e-154 551.6 547 53.6
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 1.9e-154 551.2 509 56.2
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 2.5e-154 550.8 546 54.2
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 5.5e-154 549.7 546 53.1
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 1.6e-153 548.1 553 53.9
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 1.6e-153 548.1 548 53.1
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 2.1e-153 547.7 551 53.5
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 2.1e-153 547.7 512 54.7
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 2.8e-153 547.4 511 55.2
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 2.8e-153 547.4 546 54.0
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 4.7e-153 546.6 547 53.0
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 4.7e-153 546.6 547 52.1
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 6.1e-153 546.2 548 52.6
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 6.1e-153 546.2 547 51.9
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 6.1e-153 546.2 548 52.2
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 8.0e-153 545.8 547 52.5
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 1.0e-152 545.4 509 54.6
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 1.0e-152 545.4 535 53.1
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 2.3e-152 544.3 510 54.7
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 4.0e-152 543.5 549 52.5
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 8.8e-152 542.3 548 51.6
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 2.0e-151 541.2 511 54.0
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 2.6e-151 540.8 511 54.6
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 2.6e-151 540.8 550 51.6
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 2.6e-151 540.8 547 51.7
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 4.4e-151 540.0 549 51.7
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 5.7e-151 539.7 547 51.9
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 1.7e-150 538.1 512 55.1
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 2.4e-149 534.3 509 55.0
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 5.4e-149 533.1 544 52.0
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 9.2e-149 532.3 512 53.1
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 3.5e-148 530.4 546 52.6
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 4.5e-148 530.0 544 53.3
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 5.6e-146 523.1 547 51.0
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 5.6e-146 523.1 546 50.7
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 2.1e-145 521.2 547 51.7
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 3.6e-145 520.4 511 55.4
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 1.1e-136 492.3 534 50.0
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 1.3e-134 485.3 553 49.9
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 4.0e-128 463.8 459 52.1
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 1.3e-126 458.8 471 52.4
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 7.1e-125 453.0 480 52.5
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 2.7e-116 424.5 534 45.3
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 5.6e-114 416.8 546 46.0
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 1.1e-96 359.4 448 45.3
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 4.3e-90 337.4 427 44.0
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.0e-83 316.2 327 51.4
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 5.1e-75 287.3 303 50.5
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 3.7e-73 281.2 228 60.5
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 2.4e-72 278.5 371 43.9
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 1.7e-70 272.3 375 42.4
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 3.6e-68 264.6 225 59.6
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 6.1e-60 237.3 258 51.6
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 6.7e-59 233.8 212 55.7
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 9.7e-58 229.9 188 58.5
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 1.8e-48 199.1 143 64.3
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 7.3e-29 134.0 477 28.9
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 6.0e-23 114.4 111 50.5
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 4.3e-21 108.2 78 60.3


User provided reference genes

Program Settings