Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g300 Chara braunii HOM05D006549 ORTHO05D008080 1.1e-297 1026.5 846 100.0
Mapoly0091s0083 Marchantia polymorpha HOM05D006549 ORTHO05D008080 2.9e-35 154.8 291 36.1
AagrBONN_evm.TU.Sc2ySwM_228.1610 Anthoceros agrestis HOM05D006549 ORTHO05D008080 1.2e-33 149.4 280 34.3
SEGI_14205 Sequoiadendron giganteum HOM05D006549 ORTHO05D008080 1.0e-32 146.4 224 37.5
SMO013G0006 Selaginella moellendorffii HOM05D006549 ORTHO05D008080 5.1e-32 144.1 241 35.7
Aqoxy1G00310 Aquilegia oxysepala HOM05D006549 ORTHO05D008080 2.5e-31 141.7 231 35.5
Pp3c3_2270 Physcomitrium patens HOM05D006549 ORTHO05D008080 2.5e-31 141.7 248 34.3
CANSAT54G0570 Cannabis sativa HOM05D006549 ORTHO05D008080 3.3e-31 141.4 233 34.8
Lju41A40T23 Lonicera japonica HOM05D006549 ORTHO05D008080 4.3e-31 141.0 230 34.8
Dinv22152 Davidia involucrata HOM05D006549 ORTHO05D008080 5.6e-31 140.6 228 35.1
Ah.06g193800 Amaranthus hybridus HOM05D006549 ORTHO05D008080 7.3e-31 140.2 228 35.1
MD03G1170300 Malus domestica HOM05D006549 ORTHO05D008080 7.3e-31 140.2 228 35.5
Dinv36213 Davidia involucrata HOM05D006549 ORTHO05D008080 1.2e-30 139.4 228 34.6
DCAR_000660 Daucus carota HOM05D006549 ORTHO05D008080 1.6e-30 139.0 243 32.9
TPR.G38023 Trifolium pratense HOM05D006549 ORTHO05D008080 2.8e-30 138.3 228 32.9
MD11G1187800 Malus domestica HOM05D006549 ORTHO05D008080 3.6e-30 137.9 228 35.5
Nn7g36445 Nelumbo nucifera HOM05D006549 ORTHO05D008080 3.6e-30 137.9 228 34.6
Thecc.09G240800 Theobroma cacao HOM05D006549 ORTHO05D008080 3.6e-30 137.9 228 34.2
vmacro04120 Vaccinium macrocarpon HOM05D006549 ORTHO05D008080 3.6e-30 137.9 228 34.2
Prupe.4G256800 Prunus persica HOM05D006549 ORTHO05D008080 4.7e-30 137.5 228 34.6
arahy.Tifrunner.gnm1.ann1.2W4GIE Arachis hypogaea HOM05D006549 ORTHO05D008080 6.2e-30 137.1 228 33.3
EL10Ac4g10185 Beta vulgaris HOM05D006549 ORTHO05D008080 6.2e-30 137.1 230 34.8
CSS0047891 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 8.1e-30 136.7 228 34.2
CsaV3_1G043000 Cucumis sativus L. HOM05D006549 ORTHO05D008080 8.1e-30 136.7 228 33.8
QL01p018092 Quercus lobata HOM05D006549 ORTHO05D008080 8.1e-30 136.7 233 33.5
AUR62000165 Chenopodium quinoa HOM05D006549 ORTHO05D008080 1.1e-29 136.3 230 33.5
Duzib170G0947 Durio zibethinus HOM05D006549 ORTHO05D008080 1.1e-29 136.3 228 34.6
Medtr5g009010 Medicago truncatula HOM05D006549 ORTHO05D008080 1.1e-29 136.3 231 32.9
HanXRQChr14g0433001 Helianthus annuus HOM05D006549 ORTHO05D008080 1.8e-29 135.6 229 34.5
AT5G12410 Arabidopsis thaliana HOM05D006549 ORTHO05D008080 2.4e-29 135.2 228 35.5
AUR62039846 Chenopodium quinoa HOM05D006549 ORTHO05D008080 2.4e-29 135.2 230 33.0
Gorai.006G126000 Gossypium raimondii HOM05D006549 ORTHO05D008080 3.1e-29 134.8 228 35.1
Manes.14G005500 Manihot esculenta HOM05D006549 ORTHO05D008080 3.1e-29 134.8 228 32.9
RcHm_v2.0_Chr5g0051211 Rosa chinensis HOM05D006549 ORTHO05D008080 3.1e-29 134.8 228 35.1
Hund07453 Selenicereus undatus HOM05D006549 ORTHO05D008080 3.1e-29 134.8 228 33.8
Lsat_1_v5_gn_2_29261 Lactuca sativa HOM05D006549 ORTHO05D008080 4.0e-29 134.4 228 32.0
Psat2g186960 Pisum sativum HOM05D000745 ORTHO05D000641 4.0e-29 134.4 228 32.0
Cc01_g06100 Coffea canephora HOM05D006549 ORTHO05D008080 5.2e-29 134.0 228 32.9
LjContig00222g0000121 Lotus japonicus HOM05D006549 ORTHO05D008080 5.2e-29 134.0 228 33.8
PSO384G3463 Papaver somniferum HOM05D006549 ORTHO05D008080 5.2e-29 134.0 223 35.4
ClCG03G013060 Citrullus lanatus HOM05D006549 ORTHO05D008080 6.9e-29 133.7 228 33.3
Potri.009G049700 Populus trichocarpa HOM05D006549 ORTHO05D008080 6.9e-29 133.7 228 32.5
Carub.0006s1091 Capsella rubella HOM05D006549 ORTHO05D008080 9.0e-29 133.3 228 35.1
CDE08G0181 Ceratophyllum demersum HOM05D006549 ORTHO05D008080 9.0e-29 133.3 228 33.3
Gohir.A09G111700 Gossypium hirsutum HOM05D006549 ORTHO05D008080 9.0e-29 133.3 228 34.6
Gohir.D09G108300 Gossypium hirsutum HOM05D006549 ORTHO05D008080 9.0e-29 133.3 228 34.6
Phvul.002G033900 Phaseolus vulgaris HOM05D006549 ORTHO05D008080 9.0e-29 133.3 261 31.8
CARHR200690 Cardamine hirsuta HOM05D006549 ORTHO05D008080 1.2e-28 132.9 237 33.8
Aa31LG3G14820 Aethionema arabicum HOM05D006549 ORTHO05D008080 1.5e-28 132.5 228 35.1
ECA238G1745 Erigeron canadensis HOM05D006549 ORTHO05D008080 1.5e-28 132.5 228 32.0
Oeu025891.1 Olea europaea HOM05D006549 ORTHO05D008080 2.0e-28 132.1 228 34.2
CiPaw.13G153800 Carya illinoinensis HOM05D006549 ORTHO05D008080 2.6e-28 131.7 228 33.3
Sc09g0000890 Simmondsia chinensis HOM05D006549 ORTHO05D008080 2.6e-28 131.7 252 32.5
Actinidia16353 Actinidia chinensis HOM05D006549 ORTHO05D008080 3.4e-28 131.3 258 31.4
A10p25410 Brassica napus HOM05D006549 ORTHO05D008080 3.4e-28 131.3 228 34.6
BraA10t44605Z Brassica rapa HOM05D006549 ORTHO05D008080 3.4e-28 131.3 228 34.6
FAN21G3651 Fragaria x ananassa HOM05D006549 ORTHO05D008080 3.4e-28 131.3 228 34.2
VMungo1215G3210 Vigna mungo HOM05D006549 ORTHO05D008080 3.4e-28 131.3 269 30.1
MBI13_g04769_MAGBIO Magnolia biondii HOM05D006549 ORTHO05D008080 4.4e-28 131.0 258 33.7
Rhsim13G0217400 Rhododendron simsii HOM05D002345 ORTHO05D002391 4.4e-28 131.0 230 33.0
Actinidia06932 Actinidia chinensis HOM05D006549 ORTHO05D008080 5.8e-28 130.6 258 31.8
Zm00001eb200070 Zea mays HOM05D006549 ORTHO05D008080 5.8e-28 130.6 233 32.2
C09p64480 Brassica napus HOM05D006549 ORTHO05D008080 9.9e-28 129.8 228 34.2
BolC9t59282H Brassica oleracea HOM05D006549 ORTHO05D008080 9.9e-28 129.8 228 34.2
FvH4_3g28330 Fragaria vesca HOM05D006549 ORTHO05D008080 9.9e-28 129.8 228 33.8
FAN11G3700 Fragaria x ananassa HOM05D006549 ORTHO05D008080 9.9e-28 129.8 228 33.8
ATR0721G160 Amborella trichopoda HOM05D006549 ORTHO05D008080 1.3e-27 129.4 287 30.7
arahy.Tifrunner.gnm1.ann1.9560XR Arachis hypogaea HOM05D006549 ORTHO05D008080 1.3e-27 129.4 228 32.5
PSO339G6663 Papaver somniferum HOM05D006549 ORTHO05D008080 1.3e-27 129.4 226 34.5
GSVIVG01031548001 Vitis vinifera HOM05D006549 ORTHO05D008080 1.3e-27 129.4 228 33.8
Thhalv10013724m.g Eutrema salsugineum HOM05D006549 ORTHO05D008080 2.9e-27 128.3 230 33.5
Nitab4.5_0006878g0020 Nicotiana tabacum HOM05D006549 ORTHO05D008080 2.9e-27 128.3 270 30.4
Sed0027042 Sechium edule HOM05D006549 ORTHO05D008080 2.9e-27 128.3 228 32.5
BolC3t13156H Brassica oleracea HOM05D006549 ORTHO05D008080 3.8e-27 127.9 228 33.8
Ciclev10015584m.g Citrus clementina HOM05D006549 ORTHO05D008080 3.8e-27 127.9 228 32.9
Migut.N02355 Erythranthe guttata HOM05D006549 ORTHO05D008080 3.8e-27 127.9 279 31.5
AL6G23210 Arabidopsis lyrata HOM05D006549 ORTHO05D008080 4.9e-27 127.5 276 31.5
Os11g0568600 Oryza sativa ssp. japonica HOM05D006549 ORTHO05D008080 4.9e-27 127.5 228 31.1
Sp6g31230 Schrenkiella parvula HOM05D006549 ORTHO05D008080 4.9e-27 127.5 276 31.2
THA.LOC104811185 Tarenaya hassleriana HOM05D006549 ORTHO05D008080 4.9e-27 127.5 228 32.9
Ca_24492_v3 Cicer arietinum L. HOM05D000745 ORTHO05D000641 6.4e-27 127.1 220 31.8
Eucgr.B03712 Eucalyptus grandis HOM05D006549 ORTHO05D008080 6.4e-27 127.1 277 30.3
PGR102G0709 Punica granatum HOM05D006549 ORTHO05D008080 6.4e-27 127.1 294 29.3
Lalb_Chr09g0320561 Lupinus albus HOM05D006549 ORTHO05D008080 8.4e-27 126.7 241 30.7
Glyma.01G226800 Glycine max HOM05D006549 ORTHO05D008080 1.1e-26 126.3 228 32.0
Peaxi162Scf00004g03918 Petunia axillaris HOM05D006549 ORTHO05D008080 1.4e-26 125.9 270 28.9
TWI39G1226 Tripterygium wilfordii HOM05D006549 ORTHO05D008080 1.4e-26 125.9 228 32.5
Nitab4.5_0002726g0080 Nicotiana tabacum HOM05D006549 ORTHO05D008080 1.9e-26 125.6 270 29.6
Oeu061298.1 Olea europaea HOM05D006549 ORTHO05D008080 1.9e-26 125.6 290 29.7
Solyc11g065180.2 Solanum lycopersicum HOM05D006549 ORTHO05D008080 1.9e-26 125.6 270 30.4
CAN.G633.4 Capsicum annuum HOM05D006549 ORTHO05D008080 2.4e-26 125.2 270 31.1
Potri.001G254600 Populus trichocarpa HOM05D006549 ORTHO05D008080 2.4e-26 125.2 276 29.7
Sopen11g024900 Solanum pennellii HOM05D006549 ORTHO05D008080 2.4e-26 125.2 270 30.4
C03p06560 Brassica napus HOM05D006549 ORTHO05D008080 3.2e-26 124.8 228 33.3
Glyma.11G015900 Glycine max HOM05D006549 ORTHO05D008080 4.2e-26 124.4 228 32.5
Sabra16G0155200 Salix brachista HOM05D006549 ORTHO05D008080 4.2e-26 124.4 306 28.1
Sabra09G0036200 Salix brachista HOM05D006549 ORTHO05D008080 7.1e-26 123.6 286 29.0
BraA03t09898Z Brassica rapa HOM05D006549 ORTHO05D008080 1.6e-25 122.5 269 31.6
PGSC0003DMG400031244 Solanum tuberosum HOM05D006549 ORTHO05D008080 1.6e-25 122.5 270 29.3
unitig_27.g25003 Utricularia gibba HOM05D006549 ORTHO05D008080 2.1e-25 122.1 229 32.3
A03p05610 Brassica napus HOM05D006549 ORTHO05D008080 4.6e-25 120.9 269 31.2
SGA_v2.0_scaffold42G16082 Striga asiatica HOM05D006549 ORTHO05D008080 7.8e-25 120.2 229 32.8
FAN16G0297 Fragaria x ananassa HOM05D006549 ORTHO05D008080 2.3e-24 118.6 218 33.0
MSTRG.17620 Avicennia marina HOM05D006549 ORTHO05D008080 1.1e-23 116.3 291 29.9
Haze_23190 Corylus avellana HOM05D006549 ORTHO05D008080 2.5e-23 115.2 268 29.1
Atru.chr3.2633 Acer truncatum HOM05D006549 ORTHO05D008080 7.3e-23 113.6 204 33.3
QL01p018141 Quercus lobata HOM05D006549 ORTHO05D008080 2.8e-22 111.7 204 32.4
TAR633G0410 Trochodendron aralioides HOM05D006549 ORTHO05D008080 6.2e-22 110.5 187 35.3
BcaB01g05403 Brassica carinata HOM05D006549 ORTHO05D008080 2.4e-21 108.6 279 29.0
COL.COLO4_36476 Corchorus olitorius HOM05D006549 ORTHO05D008080 2.4e-21 108.6 228 30.7
Hma1.2p1_1043F.1_g251200 Hydrangea macrophylla HOM05D006549 ORTHO05D008080 1.7e-19 102.4 185 34.6
MCO09G159 Micromonas commoda HOM05D006549 ORTHO05D008080 1.3e-16 92.8 257 29.2
Cre14.g629550 Chlamydomonas reinhardtii HOM05D006549 ORTHO05D008080 6.7e-16 90.5 238 29.4
Cc01_g06170 Coffea canephora HOM05D006549 ORTHO05D008080 2.1e-14 85.5 157 33.8
PRCOL_00001563 Prasinoderma coloniale HOM05D006549 ORTHO05D008080 1.1e-13 83.2 234 27.8
SHI46597 Sapria himalayana HOM05D006549 ORTHO05D008080 6.9e-13 80.5 259 24.7
BcaB08g37001 Brassica carinata HOM05D006549 ORTHO05D008080 3.8e-11 74.7 228 26.3
MELO3C029487.2 Cucumis melo HOM05D006549 ORTHO05D008080 3.2e-10 71.6 64 46.9
Duzib168G0228 Durio zibethinus HOM05D006549 ORTHO05D008080 2.7e-09 68.6 188 26.6
Cpa.g.sc84.3 Carica papaya HOM05D006549 ORTHO05D008080 1.3e-06 59.7 56 51.8
CSS0036252 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 2.8e-06 58.5 48 52.1


User provided reference genes

Program Settings