Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 0.0e+00 1191.4 576 100.0
CBR_g6643 Chara braunii HOM05D008095 ORTHO05D010826 5.3e-174 615.1 449 72.6
CBR_g53722 Chara braunii HOM05D000004 ORTHO05D000002 6.0e-69 266.2 285 55.1
CBR_g45549 Chara braunii HOM05D008095 ORTHO05D010826 2.9e-55 220.7 288 47.6
CBR_g28527 Chara braunii HOM05D008095 ORTHO05D010826 3.9e-44 183.7 451 33.7
CBR_g19094 Chara braunii HOM05D000004 ORTHO05D015302 2.2e-42 177.9 94 88.3
CBR_g22114 Chara braunii HOM05D008095 ORTHO05D010826 1.1e-41 175.6 336 36.3
CBR_g51494 Chara braunii HOM05D008095 ORTHO05D010826 6.9e-41 172.9 309 37.5
CBR_g19289 Chara braunii HOM05D008095 ORTHO05D010826 1.2e-40 172.2 401 34.2
CBR_g30752 Chara braunii HOM05D008095 ORTHO05D010826 1.2e-40 172.2 120 68.3
CBR_g29577 Chara braunii HOM05D008095 ORTHO05D000002 2.0e-40 171.4 440 34.1
CBR_g39981 Chara braunii HOM05D008095 ORTHO05D010826 5.9e-40 169.9 414 34.5
CBR_g27820 Chara braunii HOM05D008095 ORTHO05D010826 2.2e-39 167.9 411 33.6
CBR_g78861 Chara braunii HOM05D008095 ORTHO05D010826 1.4e-38 165.2 438 34.0
CBR_g54150 Chara braunii HOM05D008095 ORTHO05D010826 3.2e-38 164.1 370 37.8
CBR_g30745 Chara braunii HOM05D008095 ORTHO05D010826 4.2e-38 163.7 444 33.8
CBR_g52683 Chara braunii HOM05D008095 ORTHO05D010826 4.2e-38 163.7 429 33.8
CBR_g18626 Chara braunii HOM05D008095 ORTHO05D010826 1.6e-37 161.8 453 31.3
CBR_g37453 Chara braunii HOM05D008095 ORTHO05D010826 1.4e-36 158.7 131 56.5
CBR_g34799 Chara braunii HOM05D008095 ORTHO05D000407 3.0e-36 157.5 217 42.9
CBR_g34433 Chara braunii HOM05D008095 ORTHO05D010826 1.5e-35 155.2 407 33.4
CBR_g20275 Chara braunii HOM05D008095 ORTHO05D010826 9.7e-35 152.5 207 45.4
CBR_g39171 Chara braunii HOM05D008095 ORTHO05D010826 2.2e-34 151.4 299 35.8
CBR_g20990 Chara braunii HOM05D008095 ORTHO05D010826 1.4e-33 148.7 125 60.0
CBR_g32256 Chara braunii HOM05D008095 ORTHO05D010826 1.4e-33 148.7 127 59.1
CBR_g20382 Chara braunii HOM05D008095 ORTHO05D010826 7.0e-33 146.4 232 39.7
CBR_g38729 Chara braunii HOM05D008095 ORTHO05D010826 1.9e-30 138.3 135 50.4
CBR_g6700 Chara braunii HOM05D008095 ORTHO05D010826 1.9e-30 138.3 317 35.0
CBR_g12777 Chara braunii HOM05D008095 ORTHO05D010826 1.2e-29 135.6 207 43.0
CBR_g34481 Chara braunii HOM05D008095 ORTHO05D010826 4.7e-29 133.7 309 33.3
CBR_g31520 Chara braunii HOM05D008095 ORTHO05D010826 1.8e-28 131.7 290 34.1
CBR_g30509 Chara braunii HOM05D008095 ORTHO05D010826 9.7e-27 125.9 423 31.7
CBR_g3244 Chara braunii HOM05D008095 ORTHO05D010826 2.2e-26 124.8 106 55.7
CBR_g17645 Chara braunii HOM05D008095 ORTHO05D010826 6.3e-26 123.2 128 50.0
CBR_g32327 Chara braunii HOM05D008095 ORTHO05D010826 5.3e-25 120.2 406 30.3
CBR_g38134 Chara braunii HOM05D008095 ORTHO05D010826 2.0e-24 118.2 81 63.0
CBR_g907 Chara braunii HOM05D008095 ORTHO05D010826 3.5e-24 117.5 297 33.7
CBR_g48135 Chara braunii HOM05D008095 ORTHO05D010826 5.5e-22 110.2 291 36.4
CBR_g6522 Chara braunii HOM05D008095 ORTHO05D010826 9.4e-22 109.4 228 36.4
CBR_g39131 Chara braunii HOM05D008095 ORTHO05D012217 2.7e-21 107.8 123 47.2
CBR_g34365 Chara braunii HOM05D008095 ORTHO05D010826 8.0e-21 106.3 298 32.6
CBR_g31304 Chara braunii HOM05D008095 ORTHO05D010826 1.0e-20 105.9 75 64.0
CBR_g54440 Chara braunii HOM05D000062 ORTHO05D000043 1.4e-20 105.5 173 41.6
CBR_g36792 Chara braunii HOM05D008095 ORTHO05D010826 1.7e-18 98.6 156 41.7
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 8.5e-15 86.3 114 38.6
CBR_g30486 Chara braunii HOM05D008095 ORTHO05D010826 1.9e-14 85.1 93 44.1
CBR_g500 Chara braunii HOM05D008095 ORTHO05D010826 2.5e-14 84.7 93 44.1
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 4.2e-14 84.0 110 39.1
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 5.5e-14 83.6 123 36.6
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 5.5e-14 83.6 115 37.4
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 9.4e-14 82.8 156 34.6
CBR_g29980 Chara braunii HOM05D008095 ORTHO05D010826 1.2e-13 82.4 93 43.0
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 6.1e-13 80.1 115 35.7
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 6.1e-13 80.1 130 35.4
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 8.0e-13 79.7 114 36.0
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 8.0e-13 79.7 114 36.8
CBR_g40424 Chara braunii HOM05D008095 ORTHO05D010826 1.0e-12 79.3 51 64.7
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.4e-12 79.0 118 34.7
CBR_g37087 Chara braunii HOM05D008095 ORTHO05D010826 1.4e-12 79.0 94 40.4
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 1.4e-12 79.0 115 34.8
CBR_g57845 Chara braunii HOM05D008095 ORTHO05D010826 1.8e-12 78.6 104 40.4
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.8e-12 78.6 156 32.1
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 1.8e-12 78.6 115 35.7
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 2.3e-12 78.2 156 32.1
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 2.3e-12 78.2 156 32.1
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 2.3e-12 78.2 133 33.1
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 3.0e-12 77.8 114 33.3
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 4.0e-12 77.4 114 33.3
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 5.2e-12 77.0 115 34.8
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 5.2e-12 77.0 123 33.3
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 5.2e-12 77.0 120 34.2
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 6.8e-12 76.6 114 33.3
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 6.8e-12 76.6 115 35.7
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 6.8e-12 76.6 120 34.2
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 6.8e-12 76.6 119 33.6
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 8.8e-12 76.3 115 34.8
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 1.2e-11 75.9 115 33.9
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.2e-11 75.9 114 31.6
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 1.2e-11 75.9 119 33.6
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 1.5e-11 75.5 137 34.3
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 1.5e-11 75.5 133 32.3
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.5e-11 75.5 123 33.3
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 1.5e-11 75.5 119 33.6
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 1.5e-11 75.5 118 34.7
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.0e-11 75.1 114 33.3
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 2.0e-11 75.1 122 32.0
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 2.0e-11 75.1 121 37.2
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 2.6e-11 74.7 130 32.3
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 2.6e-11 74.7 130 31.5
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.6e-11 74.7 115 33.9
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 2.6e-11 74.7 122 32.8
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.6e-11 74.7 114 33.3
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 3.4e-11 74.3 124 36.3
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.4e-11 74.3 136 33.1
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.4e-11 74.3 115 34.8
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 3.4e-11 74.3 119 32.8
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 4.4e-11 73.9 115 33.0
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 4.4e-11 73.9 114 31.6
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 4.4e-11 73.9 114 33.3
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 4.4e-11 73.9 118 33.1
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 5.7e-11 73.6 140 32.9
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 5.7e-11 73.6 119 32.8
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 5.7e-11 73.6 128 32.0
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 7.5e-11 73.2 123 31.7
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 7.5e-11 73.2 114 33.3
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 9.8e-11 72.8 114 30.7
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 9.8e-11 72.8 115 35.7
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 1.3e-10 72.4 115 33.9
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 1.3e-10 72.4 122 31.1
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.3e-10 72.4 125 32.0
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 1.7e-10 72.0 127 31.5
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 1.7e-10 72.0 121 30.6
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 1.7e-10 72.0 115 31.3
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 1.7e-10 72.0 115 33.9
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 1.7e-10 72.0 121 32.2
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 2.2e-10 71.6 126 31.7
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 2.2e-10 71.6 111 32.4
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.8e-10 71.2 118 33.1
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 2.8e-10 71.2 121 30.6
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.8e-10 71.2 106 35.8
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 2.8e-10 71.2 132 32.6
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 2.8e-10 71.2 115 33.9
CBR_g22132 Chara braunii HOM05D007443 ORTHO05D135641 3.7e-10 70.9 94 38.3
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 3.7e-10 70.9 114 31.6
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 3.7e-10 70.9 115 33.0
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 4.9e-10 70.5 116 36.2
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 4.9e-10 70.5 123 30.9
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 6.3e-10 70.1 129 28.7
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 6.3e-10 70.1 132 31.1
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 8.3e-10 69.7 131 29.0
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 8.3e-10 69.7 131 29.0
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 8.3e-10 69.7 133 31.6
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 8.3e-10 69.7 121 30.6
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 8.3e-10 69.7 124 32.3
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 8.3e-10 69.7 115 33.0
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 8.3e-10 69.7 115 31.3
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 8.3e-10 69.7 123 30.1
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 1.1e-09 69.3 123 30.9
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 1.1e-09 69.3 131 29.0
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 1.1e-09 69.3 114 32.5
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 1.1e-09 69.3 114 31.6
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 1.1e-09 69.3 115 33.0
CBR_g10996 Chara braunii HOM05D008095 ORTHO05D010826 1.4e-09 68.9 51 56.9
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 1.8e-09 68.6 132 31.1
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 4.1e-09 67.4 133 29.3
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 4.1e-09 67.4 118 30.5
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 5.4e-09 67.0 122 31.1
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 5.4e-09 67.0 122 31.1
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 5.4e-09 67.0 122 31.1
CBR_g48667 Chara braunii HOM05D008095 ORTHO05D010826 7.0e-09 66.6 168 31.0
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 9.2e-09 66.2 125 29.6
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 9.2e-09 66.2 125 29.6
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 9.2e-09 66.2 105 33.3
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 9.2e-09 66.2 115 30.4
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 1.2e-08 65.9 114 31.6
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 7.7e-08 63.2 121 32.2
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 7.7e-08 63.2 114 31.6
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 1.7e-07 62.0 117 29.9
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 1.7e-07 62.0 117 29.9
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 2.3e-07 61.6 118 28.0
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 3.8e-07 60.8 112 29.5
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 6.6e-07 60.1 73 35.6
CBR_g34402 Chara braunii HOM05D008095 ORTHO05D000407 1.5e-06 58.9 155 26.5
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 1.5e-06 58.9 131 27.5
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 1.9e-06 58.5 114 27.2
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 2.5e-06 58.2 84 32.1
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 5.6e-06 57.0 73 32.9
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 7.3e-06 56.6 114 28.1
CBR_g8858 Chara braunii HOM05D000601 ORTHO05D000407 7.3e-06 56.6 57 40.4
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 9.5e-06 56.2 109 26.6
CBR_g31695 Chara braunii HOM05D000019 ORTHO05D000407 9.5e-06 56.2 177 23.2
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 9.5e-06 56.2 73 34.2


User provided reference genes

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