Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 6.7e-221 770.4 391 100.0
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 2.4e-61 240.4 353 41.9
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.6e-60 237.7 352 42.0
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 2.2e-59 233.8 356 42.1
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 2.9e-59 233.4 357 42.0
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.1e-58 231.5 314 45.2
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 1.1e-58 231.5 350 42.3
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 1.9e-58 230.7 350 40.9
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 2.5e-58 230.3 371 42.9
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 4.2e-58 229.6 366 40.2
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.2e-58 229.6 349 41.0
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 4.2e-58 229.6 355 42.0
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 5.5e-58 229.2 347 40.9
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 7.2e-58 228.8 350 41.1
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 7.2e-58 228.8 349 41.0
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 9.5e-58 228.4 351 39.9
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 1.2e-57 228.0 347 41.8
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 2.1e-57 227.3 366 39.9
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 2.7e-57 226.9 353 41.1
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 2.7e-57 226.9 351 40.7
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 4.7e-57 226.1 353 41.1
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 4.7e-57 226.1 350 41.1
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 4.7e-57 226.1 346 41.0
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.7e-57 226.1 349 40.7
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 4.7e-57 226.1 354 41.2
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 4.7e-57 226.1 353 41.4
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 6.1e-57 225.7 350 42.0
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 6.1e-57 225.7 351 39.6
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 8.0e-57 225.3 351 40.7
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 1.0e-56 224.9 349 42.1
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 1.4e-56 224.6 348 39.7
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 1.8e-56 224.2 351 41.3
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 3.0e-56 223.4 347 40.3
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 3.0e-56 223.4 352 40.6
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.0e-56 223.4 349 40.4
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.0e-56 223.4 349 40.4
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 3.0e-56 223.4 315 43.8
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 4.0e-56 223.0 357 40.9
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 5.2e-56 222.6 358 40.8
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 5.2e-56 222.6 364 40.9
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 6.8e-56 222.2 353 40.5
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 1.2e-55 221.5 348 40.8
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 1.5e-55 221.1 353 41.1
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 1.5e-55 221.1 353 39.7
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 1.5e-55 221.1 327 41.9
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 2.6e-55 220.3 352 41.2
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 3.4e-55 219.9 354 40.7
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 4.4e-55 219.5 350 40.6
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 4.4e-55 219.5 356 39.6
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 7.5e-55 218.8 353 40.8
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 7.5e-55 218.8 353 40.2
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 9.8e-55 218.4 352 40.9
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 1.3e-54 218.0 349 39.3
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 1.3e-54 218.0 353 40.5
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 1.3e-54 218.0 359 41.2
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 1.7e-54 217.6 353 40.2
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 1.7e-54 217.6 348 41.4
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 2.8e-54 216.9 362 39.5
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 3.7e-54 216.5 355 40.6
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 4.9e-54 216.1 358 39.7
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 1.1e-53 214.9 349 39.5
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 1.8e-53 214.2 357 39.5
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 2.4e-53 213.8 364 39.0
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 2.4e-53 213.8 350 39.4
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 7.7e-52 208.8 348 38.2
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 1.0e-51 208.4 355 39.2
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 1.3e-51 208.0 348 38.8
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 1.7e-51 207.6 364 39.0
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 2.3e-51 207.2 353 38.8
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 3.8e-51 206.5 352 38.1
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 6.6e-51 205.7 341 39.0
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 8.6e-51 205.3 352 38.4
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 1.1e-50 204.9 355 36.9
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 1.5e-50 204.5 305 42.0
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 1.5e-50 204.5 347 37.8
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 1.9e-50 204.1 358 36.9
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.9e-50 204.1 271 44.3
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 2.5e-50 203.8 364 38.7
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 5.6e-50 202.6 315 41.6
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 5.6e-50 202.6 342 39.5
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 5.6e-50 202.6 271 44.6
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 5.6e-50 202.6 361 37.7
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 9.5e-50 201.8 351 38.2
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 2.1e-49 200.7 351 36.8
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 8.3e-46 188.7 348 39.4
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 8.3e-46 188.7 325 39.7
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 1.1e-45 188.3 347 36.6
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 3.2e-45 186.8 353 36.3
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 3.5e-44 183.3 354 36.4
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 7.8e-44 182.2 302 39.7
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 9.5e-42 175.3 369 36.3
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 1.2e-41 174.9 365 34.0
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.1e-41 174.1 222 46.4
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 2.8e-41 173.7 354 36.7
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 4.7e-41 172.9 240 42.9
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 6.4e-38 162.5 349 33.5
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 6.0e-36 156.0 378 31.5
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 1.5e-31 141.4 360 33.9
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 1.6e-28 131.3 219 38.8
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 4.6e-28 129.8 128 50.0
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 4.0e-24 116.7 185 43.2
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 1.6e-17 94.7 185 34.1
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 1.6e-17 94.7 133 41.4
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 8.1e-17 92.4 203 33.5
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 4.4e-15 86.7 226 32.3
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.7e-14 84.7 100 45.0
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 8.7e-11 72.4 183 31.7


User provided reference genes

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