Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g29785 Chara braunii HOM05D003801 ORTHO05D004812 0.0e+00 2029.6 1112 100.0
Mapoly0002s0142 Marchantia polymorpha HOM05D003801 ORTHO05D004812 1.4e-276 956.8 1005 50.4
Pp3c17_6540 Physcomitrium patens HOM05D003801 ORTHO05D004812 7.1e-276 954.5 989 50.9
SMO347G0592 Selaginella moellendorffii HOM05D003801 ORTHO05D004812 3.5e-251 872.5 1039 47.4
SEGI_40714 Sequoiadendron giganteum HOM05D003801 ORTHO05D004812 1.0e-242 844.3 970 47.7
Sed0013919 Sechium edule HOM05D003801 ORTHO05D004812 4.3e-241 839.0 989 46.9
FvH4_3g40080 Fragaria vesca HOM05D003801 ORTHO05D004812 9.7e-241 837.8 998 47.2
RcHm_v2.0_Chr5g0072271 Rosa chinensis HOM05D003801 ORTHO05D004812 3.7e-240 835.9 963 48.4
Prupe.6G045000 Prunus persica HOM05D003801 ORTHO05D004812 6.3e-240 835.1 1016 46.9
GSVIVG01024601001 Vitis vinifera HOM05D003801 ORTHO05D004812 1.8e-239 833.6 966 47.9
PGR004G1069 Punica granatum HOM05D003801 ORTHO05D004812 2.0e-238 830.1 987 46.8
Manes.18G140750 Manihot esculenta HOM05D003801 ORTHO05D004812 2.6e-238 829.7 963 48.1
FAN11G2663 Fragaria x ananassa HOM05D003801 ORTHO05D004812 1.0e-237 827.8 993 46.4
FAN21G1607 Fragaria x ananassa HOM05D003801 ORTHO05D004812 1.0e-237 827.8 1004 46.5
Atru.chr1.2566 Acer truncatum HOM05D003801 ORTHO05D004812 3.2e-236 822.8 984 47.3
CsaV3_1G036690 Cucumis sativus L. HOM05D003801 ORTHO05D004812 4.2e-236 822.4 985 46.3
TWI79G0650 Tripterygium wilfordii HOM05D003801 ORTHO05D004812 4.7e-235 818.9 968 46.9
CDE04G3388 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 7.9e-235 818.1 964 46.0
Potri.013G154300 Populus trichocarpa HOM05D003801 ORTHO05D004812 1.0e-234 817.8 987 47.5
VMungo0647G2088 Vigna mungo HOM05D003801 ORTHO05D004812 1.8e-234 817.0 988 46.1
Nn1g08532 Nelumbo nucifera HOM05D003801 ORTHO05D004812 2.3e-234 816.6 980 46.7
ATR0584G141 Amborella trichopoda HOM05D003801 ORTHO05D004812 3.9e-234 815.8 945 46.2
Ca_05689_v3 Cicer arietinum L. HOM05D003801 ORTHO05D004812 5.1e-234 815.5 980 47.0
MSTRG.17901 Avicennia marina HOM05D003801 ORTHO05D004812 8.8e-234 814.7 982 46.2
EL10Ac7g15867 Beta vulgaris HOM05D003801 ORTHO05D004812 8.8e-234 814.7 990 46.6
CiPaw.13G066600 Carya illinoinensis HOM05D003801 ORTHO05D004812 1.1e-233 814.3 987 47.1
Sabra19G0130000 Salix brachista HOM05D003801 ORTHO05D004812 1.1e-233 814.3 988 48.0
Thecc.09G360800 Theobroma cacao HOM05D003801 ORTHO05D004812 3.3e-233 812.8 1010 45.8
Cpa.g.sc173.16 Carica papaya HOM05D003801 ORTHO05D004812 5.7e-233 812.0 985 46.5
Psat2g052760 Pisum sativum HOM05D003801 ORTHO05D004812 7.4e-233 811.6 987 46.8
TWI75G1891 Tripterygium wilfordii HOM05D003801 ORTHO05D004812 7.4e-233 811.6 989 46.4
Oeu044915.1 Olea europaea HOM05D003801 ORTHO05D004812 3.7e-232 809.3 961 46.9
Gorai.003G151500 Gossypium raimondii HOM05D003801 ORTHO05D004812 4.8e-232 808.9 984 45.7
Gohir.A03G024300 Gossypium hirsutum HOM05D003801 ORTHO05D004812 6.3e-232 808.5 984 45.7
Cfa011800 Carpinus fangiana HOM05D003801 ORTHO05D004812 8.2e-232 808.1 992 46.5
Sabra19G0125000 Salix brachista HOM05D003801 ORTHO05D004812 8.2e-232 808.1 996 47.7
ClCG03G000210 Citrullus lanatus HOM05D003801 ORTHO05D004812 1.1e-231 807.7 1016 45.2
Gohir.D03G144200 Gossypium hirsutum HOM05D003801 ORTHO05D004812 1.1e-231 807.7 984 45.7
LjContig00141g0011314 Lotus japonicus HOM05D003801 ORTHO05D004812 1.1e-231 807.7 959 46.9
Haze_24439 Corylus avellana HOM05D003801 ORTHO05D004812 2.4e-231 806.6 993 46.4
Glyma.14G201500 Glycine max HOM05D003801 ORTHO05D004812 3.1e-231 806.2 956 46.2
TAR369G0201 Trochodendron aralioides HOM05D003801 ORTHO05D004812 4.1e-231 805.8 977 46.2
Nn5g27878 Nelumbo nucifera HOM05D003801 ORTHO05D004812 5.3e-231 805.4 975 46.1
Carub.0001s0624 Capsella rubella HOM05D003801 ORTHO05D004812 7.0e-231 805.1 984 45.5
AUR62036227 Chenopodium quinoa HOM05D003801 ORTHO05D004812 1.2e-230 804.3 988 45.5
CAN.G1702.5 Capsicum annuum HOM05D003801 ORTHO05D004812 1.5e-230 803.9 959 46.3
Cc01_g15070 Coffea canephora HOM05D003801 ORTHO05D004812 1.5e-230 803.9 994 45.1
ECA247G0395 Erigeron canadensis HOM05D003801 ORTHO05D004812 2.6e-230 803.1 984 46.0
Potri.019G127000 Populus trichocarpa HOM05D003801 ORTHO05D004812 4.5e-230 802.4 987 46.2
MSTRG.18544 Avicennia marina HOM05D003801 ORTHO05D004812 5.9e-230 802.0 989 45.5
TAR623G1445 Trochodendron aralioides HOM05D003801 ORTHO05D004812 5.9e-230 802.0 986 46.5
Hma1.2p1_1637F.1_g294880 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 1.0e-229 801.2 986 45.9
DCAR_028861 Daucus carota HOM05D003801 ORTHO05D004812 1.3e-229 800.8 962 45.6
Peaxi162Scf00095g00168 Petunia axillaris HOM05D003801 ORTHO05D004812 1.7e-229 800.4 982 47.1
Sc17g0002560 Simmondsia chinensis HOM05D003801 ORTHO05D004812 2.9e-229 799.7 1026 45.4
CSS0002946 Camellia sinensis var. sinensis HOM05D003801 ORTHO05D004812 3.8e-229 799.3 985 45.1
CARHR006620 Cardamine hirsuta HOM05D003801 ORTHO05D004812 3.8e-229 799.3 984 45.3
HanXRQChr08g0228441 Helianthus annuus HOM05D003801 ORTHO05D004812 3.8e-229 799.3 985 45.0
Glyma.02G233700 Glycine max HOM05D003801 ORTHO05D004812 1.5e-228 797.3 957 45.8
Migut.D00836 Erythranthe guttata HOM05D003801 ORTHO05D004812 1.9e-228 797.0 977 45.4
Eucgr.B04013 Eucalyptus grandis HOM05D003801 ORTHO05D004812 3.2e-228 796.2 966 45.7
MD03G1058800 Malus domestica HOM05D003801 ORTHO05D004812 3.2e-228 796.2 1016 45.2
QL01p018072 Quercus lobata HOM05D003801 ORTHO05D004812 4.2e-228 795.8 988 45.3
AT1G06950 Arabidopsis thaliana HOM05D003801 ORTHO05D004812 5.5e-228 795.4 984 44.9
Sabra13G0124100 Salix brachista HOM05D003801 ORTHO05D004812 9.4e-228 794.7 1023 45.9
AL1G16990 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 1.2e-227 794.3 984 45.1
Phvul.008G250000 Phaseolus vulgaris HOM05D003801 ORTHO05D004812 2.1e-227 793.5 960 45.9
Thhalv10006671m.g Eutrema salsugineum HOM05D003801 ORTHO05D004812 4.7e-227 792.3 984 45.0
AUR62009720 Chenopodium quinoa HOM05D003801 ORTHO05D004812 1.0e-226 791.2 949 46.0
Duzib168G2305 Durio zibethinus HOM05D003801 ORTHO05D004812 1.4e-226 790.8 970 45.9
Sp1g05660 Schrenkiella parvula HOM05D003801 ORTHO05D004812 1.8e-226 790.4 985 45.6
BcaC05g24660 Brassica carinata HOM05D003801 ORTHO05D004812 6.7e-226 788.5 959 45.7
C08p02740 Brassica napus HOM05D003801 ORTHO05D004812 6.7e-226 788.5 992 45.2
A08p35840 Brassica napus HOM05D003801 ORTHO05D004812 8.8e-226 788.1 987 45.3
BolC5t29277H Brassica oleracea HOM05D003801 ORTHO05D004812 1.5e-225 787.3 959 45.6
BraA08t35491Z Brassica rapa HOM05D003801 ORTHO05D004812 2.6e-225 786.6 987 45.2
CANSAT54G0450 Cannabis sativa HOM05D003801 ORTHO05D004812 2.6e-225 786.6 989 45.2
FAN16G2780 Fragaria x ananassa HOM05D003801 ORTHO05D004812 3.3e-225 786.2 1023 44.7
Medtr5g074690 Medicago truncatula HOM05D003801 ORTHO05D004812 5.7e-225 785.4 987 45.3
Solyc09g031780.3 Solanum lycopersicum HOM05D003801 ORTHO05D004812 1.7e-224 783.9 982 45.9
BraA10t42811Z Brassica rapa HOM05D003801 ORTHO05D004812 3.7e-224 782.7 959 45.8
Lalb_Chr10g0103681 Lupinus albus HOM05D003801 ORTHO05D004812 3.7e-224 782.7 983 45.9
COL.COLO4_11183 Corchorus olitorius HOM05D003801 ORTHO05D004812 4.8e-224 782.3 936 46.5
PSO384G0852 Papaver somniferum HOM05D003801 ORTHO05D004812 1.1e-223 781.2 978 46.2
PSO339G1799 Papaver somniferum HOM05D003801 ORTHO05D004812 1.8e-223 780.4 978 46.0
Lsat_1_v5_gn_9_14381 Lactuca sativa HOM05D003801 ORTHO05D004812 5.3e-223 778.9 992 44.5
Aa31LG5G6380 Aethionema arabicum HOM05D003801 ORTHO05D004812 2.0e-222 776.9 1002 44.4
Hund05047 Selenicereus undatus HOM05D003801 ORTHO05D004812 5.9e-222 775.4 989 44.8
Psat5g150840 Pisum sativum HOM05D003801 ORTHO05D004812 7.7e-222 775.0 969 44.8
Sopen09g014770 Solanum pennellii HOM05D003801 ORTHO05D004812 6.5e-221 771.9 983 45.7
FAN25G2625 Fragaria x ananassa HOM05D003801 ORTHO05D004812 1.1e-220 771.2 991 44.9
TPR.G24942 Trifolium pratense HOM05D003801 ORTHO05D004812 1.5e-220 770.8 959 45.2
Medtr3g466170 Medicago truncatula HOM05D003801 ORTHO05D004812 2.7e-219 766.5 959 45.0
unitig_747.g21451 Utricularia gibba HOM05D003801 ORTHO05D004812 1.8e-218 763.8 988 44.1
arahy.Tifrunner.gnm1.ann1.Z7TKRX Arachis hypogaea HOM05D003801 ORTHO05D004812 8.8e-218 761.5 1027 42.8
MD11G1060900 Malus domestica HOM05D003801 ORTHO05D004812 8.8e-218 761.5 981 44.4
A10p05480 Brassica napus HOM05D003801 ORTHO05D004812 3.7e-216 756.1 1006 43.6
Actinidia32598 Actinidia chinensis HOM05D003801 ORTHO05D004812 1.6e-214 750.7 985 43.7
TPR.G17744 Trifolium pratense HOM05D003801 ORTHO05D004812 8.0e-211 738.4 865 47.2
BolC8t47069H Brassica oleracea HOM05D003801 ORTHO05D004812 1.0e-210 738.0 1025 42.3
SGA_v2.0_scaffold20G09298 Striga asiatica HOM05D003801 ORTHO05D004812 2.3e-210 736.9 960 44.0
Ciclev10000209m.g Citrus clementina HOM05D003801 ORTHO05D004812 2.0e-209 733.8 842 46.9
Glyma.18G055700 Glycine max HOM05D003801 ORTHO05D004812 7.5e-209 731.9 956 43.8
Aqoxy2G00749 Aquilegia oxysepala HOM05D003801 ORTHO05D004812 1.7e-208 730.7 985 41.7
Ca_13017_v3 Cicer arietinum L. HOM05D003801 ORTHO05D004812 4.5e-206 722.6 956 42.9
Lj1A123G49 Lonicera japonica HOM05D003801 ORTHO05D004812 1.1e-204 718.0 967 42.5
Rhsim13G0062300 Rhododendron simsii HOM05D003801 ORTHO05D004812 1.6e-203 714.1 1025 41.6
Zm00001eb044910 Zea mays HOM05D003801 ORTHO05D004812 4.4e-201 706.1 973 42.5
vmacro02901 Vaccinium macrocarpon HOM05D003801 ORTHO05D004812 1.7e-200 704.1 988 41.9
Atru.chr1.2574 Acer truncatum HOM05D003801 ORTHO05D004812 1.8e-199 700.7 806 48.1
MELO3C020500.2 Cucumis melo HOM05D003801 ORTHO05D004812 8.9e-194 681.8 803 47.2
Dinv28708 Davidia involucrata HOM05D003801 ORTHO05D004812 3.9e-189 666.4 801 45.7
Pp3c14_10270 Physcomitrium patens HOM05D003801 ORTHO05D004812 3.4e-185 653.3 695 49.5
Lj1A124T30 Lonicera japonica HOM05D003801 ORTHO05D004812 2.1e-179 634.0 764 44.9
PRCOL_00000154 Prasinoderma coloniale HOM05D003801 ORTHO05D004812 1.5e-169 601.3 1041 37.1
Eucgr.I01027 Eucalyptus grandis HOM05D003801 ORTHO05D004812 2.3e-165 587.4 709 44.3
Cc01_g14930 Coffea canephora HOM05D003801 ORTHO05D004812 6.6e-165 585.9 640 48.3
Nitab4.5_0004906g0050 Nicotiana tabacum HOM05D003801 ORTHO05D004812 1.1e-164 585.1 694 49.3
Nitab4.5_0000486g0130 Nicotiana tabacum HOM05D003801 ORTHO05D004812 3.2e-143 513.8 558 49.8
BcaB03g13435 Brassica carinata HOM05D003801 ORTHO05D004812 1.9e-140 504.6 563 47.6
Nitab4.5_0004637g0060 Nicotiana tabacum HOM05D003801 ORTHO05D004812 2.1e-139 501.1 561 49.2
Os10g0492000 Oryza sativa ssp. japonica HOM05D003801 ORTHO05D004812 1.1e-138 498.8 603 44.9
MCO16G620 Micromonas commoda HOM05D003801 ORTHO05D004812 1.2e-137 495.4 1041 33.2
Cre10.g452450 Chlamydomonas reinhardtii HOM05D003801 ORTHO05D004812 5.7e-132 476.5 956 33.3
Dinv12255 Davidia involucrata HOM05D003801 ORTHO05D004812 2.2e-123 448.0 579 43.2
Hma1.2p1_1421F.1_g282490 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 9.4e-119 432.6 497 47.7
HPP92_014541 Vanilla planifolia HOM05D003801 ORTHO05D004812 1.3e-107 395.6 576 42.0
Sabra19G0125200 Salix brachista HOM05D003801 ORTHO05D004812 3.8e-104 384.0 967 30.7
BcaB02g06769 Brassica carinata HOM05D003801 ORTHO05D004812 8.5e-96 356.3 477 45.5
SHI19243 Sapria himalayana HOM05D003801 ORTHO05D004812 2.7e-89 334.7 607 34.3
Sabra19G0124700 Salix brachista HOM05D003801 ORTHO05D004812 9.8e-84 316.2 319 53.0
Sabra19G0125100 Salix brachista HOM05D003801 ORTHO05D004812 1.1e-74 286.2 595 33.1
HPP92_014542 Vanilla planifolia HOM05D003801 ORTHO05D004812 5.0e-72 277.3 308 48.1
C05p05030 Brassica napus HOM05D001129 ORTHO05D003814 8.6e-72 276.6 337 46.3
MBI15_g33038_MAGBIO Magnolia biondii HOM05D003801 ORTHO05D004812 1.5e-68 265.8 253 54.2
MBI07_g35968_MAGBIO Magnolia biondii HOM05D003801 ORTHO05D004812 7.5e-68 263.5 260 53.8
Os10g0492300 Oryza sativa ssp. japonica HOM05D003801 ORTHO05D004812 9.8e-68 263.1 409 38.9
Sabra19G0125300 Salix brachista HOM05D003801 ORTHO05D004812 5.8e-60 237.3 262 48.9
Oeu050040.1 Olea europaea HOM05D003801 ORTHO05D004812 1.6e-57 229.2 285 43.9
Oeu050039.1 Olea europaea HOM05D003801 ORTHO05D004812 6.6e-56 223.8 515 35.3
AL1G17110 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 1.1e-55 223.0 230 47.8
Dinv12256 Davidia involucrata HOM05D003801 ORTHO05D004812 1.4e-53 216.1 293 42.0
CDE07G0033 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 3.1e-53 214.9 566 30.9
Lj6A615T90 Lonicera japonica HOM05D003801 ORTHO05D004812 3.2e-50 204.9 246 46.3
Lj6A615T91 Lonicera japonica HOM05D003801 ORTHO05D004812 7.3e-47 193.7 494 26.9
PSO339G3141 Papaver somniferum HOM05D003801 ORTHO05D004812 9.0e-45 186.8 244 42.2
QL05p055919 Quercus lobata HOM05D003801 ORTHO05D004812 2.0e-44 185.7 393 33.8
QL05p056751 Quercus lobata HOM05D003801 ORTHO05D004812 1.3e-43 183.0 279 39.4
CANSAT80G1859 Cannabis sativa HOM05D003801 ORTHO05D004812 2.5e-39 168.7 134 63.4
Actinidia23184 Actinidia chinensis HOM05D003801 ORTHO05D004812 5.6e-39 167.5 242 42.6
PSO339G0950 Papaver somniferum HOM05D003801 ORTHO05D004812 1.5e-36 159.5 219 39.7
SHI19239 Sapria himalayana HOM05D003801 ORTHO05D004812 4.2e-34 151.4 284 36.3
Hma1.2p1_0613F.1_g189200 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 5.5e-34 151.0 302 35.4
arahy.Tifrunner.gnm1.ann1.WCY7KD Arachis hypogaea HOM05D003801 ORTHO05D004812 2.3e-32 145.6 168 47.6
Sabra19G0124600 Salix brachista HOM05D003801 ORTHO05D004812 5.1e-32 144.4 213 42.7
CDE07G0490 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 4.5e-28 131.3 591 24.0
Hma1.2p1_1586F.1_g292110 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 6.5e-27 127.5 244 36.5
Cc01_g14940 Coffea canephora HOM05D003801 ORTHO05D004812 1.9e-26 125.9 157 48.4
CDE07G0464 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 3.0e-24 118.6 166 41.0
CSS0035288 Camellia sinensis var. sinensis HOM05D003801 ORTHO05D004812 8.7e-24 117.1 123 44.7
TAR624G1267 Trochodendron aralioides HOM05D004621 ORTHO05D005817 1.5e-23 116.3 154 40.3
CDE07G0188 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 1.1e-21 110.2 201 34.3
AL1G16970 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 1.8e-21 109.4 73 71.2
AL1G17100 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 1.8e-21 109.4 73 71.2
Glyma.11G162400 Glycine max HOM05D003801 ORTHO05D004812 2.9e-19 102.1 131 39.7
C01p22580 Brassica napus HOM05D003801 ORTHO05D017532 8.5e-19 100.5 390 26.7
BolC1t01884H Brassica oleracea HOM05D003801 ORTHO05D017532 1.1e-18 100.1 412 26.0
SEGI_21560 Sequoiadendron giganteum HOM05D003801 ORTHO05D010437 2.5e-15 89.0 162 32.1
C05p05050 Brassica napus HOM05D003801 ORTHO05D004812 9.1e-13 80.5 73 47.9
TAR629G1141 Trochodendron aralioides HOM05D000566 ORTHO05D000686 4.5e-12 78.2 72 48.6
COL.COLO4_07614 Corchorus olitorius HOM05D003801 ORTHO05D004812 7.7e-12 77.4 190 29.5
BolC1t02191H Brassica oleracea HOM05D003801 ORTHO05D017532 1.3e-11 76.6 136 33.1
Cc01_g14920 Coffea canephora HOM05D003801 ORTHO05D004812 2.2e-11 75.9 196 32.1
BcaC09g51691 Brassica carinata HOM05D003801 ORTHO05D017532 5.5e-10 71.2 182 29.1
VMungo1215G2313 Vigna mungo HOM05D003801 ORTHO05D004812 7.9e-09 67.4 75 36.0
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 1.4e-08 66.6 78 42.3
SHI19242 Sapria himalayana HOM05D003801 ORTHO05D004812 8.8e-08 63.9 121 38.0
BcaC09g50643 Brassica carinata HOM05D003801 ORTHO05D017532 6.3e-06 57.8 91 40.7


User provided reference genes

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