Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 3.0e-205 718.4 391 100.0
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 7.5e-31 139.0 140 47.1
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 9.8e-31 138.7 102 55.9
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 9.8e-31 138.7 102 52.9
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 9.8e-31 138.7 102 55.9
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 1.3e-30 138.3 144 44.4
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 2.2e-30 137.5 102 53.9
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 2.2e-30 137.5 76 71.1
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 2.2e-30 137.5 101 55.4
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 2.2e-30 137.5 102 54.9
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 3.7e-30 136.7 102 54.9
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 3.7e-30 136.7 101 54.5
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 3.7e-30 136.7 102 53.9
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 3.7e-30 136.7 102 54.9
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 4.9e-30 136.3 143 44.8
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 6.4e-30 136.0 102 53.9
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 6.4e-30 136.0 102 53.9
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 8.3e-30 135.6 102 53.9
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 8.3e-30 135.6 102 53.9
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 8.3e-30 135.6 102 53.9
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 8.3e-30 135.6 102 53.9
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 8.3e-30 135.6 103 50.5
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 1.1e-29 135.2 102 53.9
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 1.1e-29 135.2 102 53.9
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 1.1e-29 135.2 102 54.9
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 1.1e-29 135.2 102 53.9
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 1.4e-29 134.8 121 47.9
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 1.4e-29 134.8 121 47.9
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 1.4e-29 134.8 102 52.9
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 1.4e-29 134.8 102 52.9
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 1.4e-29 134.8 124 46.8
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 1.4e-29 134.8 124 46.8
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 1.9e-29 134.4 102 52.9
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 1.9e-29 134.4 102 52.9
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 1.9e-29 134.4 119 47.9
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 2.4e-29 134.0 160 40.6
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 3.2e-29 133.7 102 53.9
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 3.2e-29 133.7 102 52.9
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 3.2e-29 133.7 102 55.9
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 3.2e-29 133.7 87 59.8
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 3.2e-29 133.7 101 53.5
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 3.2e-29 133.7 101 53.5
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 3.2e-29 133.7 101 53.5
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 4.1e-29 133.3 102 54.9
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 4.1e-29 133.3 102 53.9
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 5.4e-29 132.9 105 51.4
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 5.4e-29 132.9 102 53.9
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 7.1e-29 132.5 102 52.9
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 7.1e-29 132.5 142 43.7
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 9.2e-29 132.1 102 54.9
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 9.2e-29 132.1 101 53.5
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 9.2e-29 132.1 102 53.9
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 1.2e-28 131.7 79 63.3
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 1.2e-28 131.7 121 45.5
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 1.2e-28 131.7 102 52.0
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 1.6e-28 131.3 106 52.8
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 1.6e-28 131.3 106 52.8
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 1.6e-28 131.3 124 46.8
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 1.6e-28 131.3 102 51.0
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 1.6e-28 131.3 122 44.3
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 1.6e-28 131.3 101 54.5
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 2.1e-28 131.0 106 52.8
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 2.1e-28 131.0 106 52.8
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 2.1e-28 131.0 106 52.8
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 2.1e-28 131.0 85 61.2
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 2.1e-28 131.0 102 52.0
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 2.7e-28 130.6 101 52.5
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 2.7e-28 130.6 143 43.4
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 3.5e-28 130.2 102 52.9
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 3.5e-28 130.2 102 52.9
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 4.6e-28 129.8 125 44.0
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 4.6e-28 129.8 102 52.9
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 4.6e-28 129.8 101 53.5
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 4.6e-28 129.8 102 52.9
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 6.0e-28 129.4 103 50.5
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 7.8e-28 129.0 103 54.4
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 7.8e-28 129.0 79 60.8
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 7.8e-28 129.0 102 52.9
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 1.0e-27 128.6 102 53.9
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.0e-27 128.6 102 52.0
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 1.0e-27 128.6 102 51.0
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 1.0e-27 128.6 102 51.0
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 1.0e-27 128.6 103 54.4
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 1.0e-27 128.6 102 51.0
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 1.3e-27 128.3 102 52.9
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 1.3e-27 128.3 102 52.9
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 1.3e-27 128.3 78 62.8
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 2.3e-27 127.5 102 51.0
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 2.3e-27 127.5 102 51.0
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 2.3e-27 127.5 85 58.8
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 2.3e-27 127.5 102 49.0
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 3.0e-27 127.1 78 62.8
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 5.1e-27 126.3 102 50.0
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 5.1e-27 126.3 102 51.0
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 6.6e-27 125.9 78 60.3
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 6.6e-27 125.9 102 51.0
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 8.6e-27 125.6 102 51.0
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 8.6e-27 125.6 102 52.0
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.1e-26 125.2 141 41.1
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 1.9e-26 124.4 122 43.4
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.9e-26 124.4 76 61.8
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.9e-26 124.4 76 61.8
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 2.5e-26 124.0 102 51.0
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 2.5e-26 124.0 85 56.5
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 3.3e-26 123.6 102 51.0
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 3.3e-26 123.6 102 51.0
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 3.3e-26 123.6 121 45.5
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 5.6e-26 122.9 79 60.8
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 5.6e-26 122.9 102 52.0
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 7.3e-26 122.5 122 41.8
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 7.3e-26 122.5 102 48.0
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 4.7e-25 119.8 85 54.1
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 4.7e-25 119.8 85 54.1
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 4.7e-25 119.8 85 54.1
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 6.2e-25 119.4 85 54.1
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 4.0e-24 116.7 104 47.1
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 2.4e-21 107.5 123 41.5
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.3e-09 68.6 65 49.2
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 1.4e-08 65.1 36 66.7


User provided reference genes

Program Settings