Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 0.0e+00 1133.2 599 100.0
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 2.1e-56 224.6 468 36.1
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 1.3e-53 215.3 425 36.7
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 1.8e-52 211.5 418 37.3
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 1.8e-52 211.5 408 35.5
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 2.4e-52 211.1 416 35.3
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 2.4e-52 211.1 413 35.8
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 4.1e-52 210.3 415 37.6
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 9.1e-52 209.1 410 34.9
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 4.5e-51 206.8 423 35.7
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 5.9e-51 206.5 407 35.9
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 7.7e-51 206.1 402 37.6
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 2.2e-50 204.5 408 33.8
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 3.8e-50 203.8 418 35.9
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 3.8e-50 203.8 402 37.3
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 5.0e-50 203.4 445 33.5
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 1.1e-49 202.2 408 38.0
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 7.2e-49 199.5 404 36.6
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 7.2e-49 199.5 416 35.3
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 9.4e-49 199.1 418 36.8
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 2.1e-48 198.0 410 35.4
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 2.7e-48 197.6 405 35.6
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.7e-48 197.6 402 35.6
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 2.7e-48 197.6 417 34.5
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 3.6e-48 197.2 415 35.2
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 3.6e-48 197.2 403 37.7
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 4.7e-48 196.8 429 37.3
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 8.0e-48 196.1 426 35.2
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 8.0e-48 196.1 406 36.7
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 1.4e-47 195.3 419 36.3
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.4e-47 195.3 434 33.9
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 1.4e-47 195.3 399 36.6
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 1.4e-47 195.3 466 34.5
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 1.8e-47 194.9 418 36.4
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 2.3e-47 194.5 466 33.9
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 3.0e-47 194.1 418 36.6
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 3.0e-47 194.1 382 35.9
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.0e-47 194.1 419 34.8
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 3.0e-47 194.1 437 35.2
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 4.0e-47 193.7 417 36.5
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 6.7e-47 193.0 407 37.6
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 8.8e-47 192.6 429 36.1
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 8.8e-47 192.6 421 35.2
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.1e-46 192.2 405 38.3
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 1.5e-46 191.8 420 36.7
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 2.0e-46 191.4 453 34.2
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 2.6e-46 191.0 416 34.4
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 3.3e-46 190.7 416 34.1
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 4.4e-46 190.3 420 36.4
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 4.4e-46 190.3 420 36.4
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.7e-46 189.9 420 34.8
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 7.5e-46 189.5 419 36.8
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 9.7e-46 189.1 420 36.2
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 1.3e-45 188.7 412 36.9
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 1.3e-45 188.7 435 33.1
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.2e-45 188.0 420 34.5
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 3.7e-45 187.2 417 34.5
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 6.3e-45 186.4 401 34.4
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 6.3e-45 186.4 398 34.2
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 1.1e-44 185.7 419 34.1
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 3.1e-44 184.1 399 32.6
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 4.1e-44 183.7 401 33.7
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 4.1e-44 183.7 402 33.3
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 5.3e-44 183.3 384 35.2
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 5.3e-44 183.3 399 34.1
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 7.0e-44 183.0 395 34.4
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 7.0e-44 183.0 425 34.1
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 7.0e-44 183.0 414 33.8
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 7.0e-44 183.0 423 34.0
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 1.2e-43 182.2 399 32.3
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 2.0e-43 181.4 399 34.8
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 2.0e-43 181.4 404 34.7
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 2.7e-43 181.0 393 35.9
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 2.7e-43 181.0 417 35.7
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 3.5e-43 180.6 400 35.8
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 3.5e-43 180.6 403 35.2
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 7.7e-43 179.5 423 33.8
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 1.0e-42 179.1 383 36.3
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 5.0e-42 176.8 400 35.5
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 5.0e-42 176.8 395 35.4
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 5.0e-42 176.8 377 36.6
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 5.0e-42 176.8 416 32.9
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 8.5e-42 176.0 400 34.5
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 8.5e-42 176.0 400 34.5
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 8.5e-42 176.0 395 33.7
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 1.1e-41 175.6 395 35.7
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 1.9e-41 174.9 401 35.2
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 1.9e-41 174.9 395 32.9
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 7.2e-41 172.9 396 34.6
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 9.4e-41 172.6 407 36.1
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.1e-40 171.4 262 43.9
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 2.1e-40 171.4 401 33.9
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 2.7e-40 171.0 395 34.4
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 2.7e-40 171.0 420 33.1
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.6e-40 170.6 262 43.9
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 4.7e-40 170.2 409 33.0
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 4.7e-40 170.2 271 41.0
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 8.0e-40 169.5 397 34.3
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 1.8e-39 168.3 432 32.9
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 2.3e-39 167.9 414 33.8
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 6.8e-39 166.4 380 34.5
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 1.5e-38 165.2 420 31.2
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 3.4e-38 164.1 383 33.4
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 7.5e-38 162.9 384 33.1
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 6.3e-37 159.8 355 34.9
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 7.0e-36 156.4 356 34.3
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 9.1e-36 156.0 357 35.0
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 1.2e-35 155.6 164 50.0
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 2.7e-35 154.5 409 33.7
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 5.9e-35 153.3 344 33.7
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 7.7e-35 152.9 430 31.6
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 1.0e-31 142.5 299 36.1
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 1.8e-31 141.7 482 28.6
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 1.8e-31 141.7 364 31.3
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 2.6e-30 137.9 405 29.4
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 1.7e-29 135.2 213 36.6
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 2.0e-27 128.3 350 34.0
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 2.7e-27 127.9 235 39.6
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 8.6e-26 122.9 213 41.3
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 2.5e-25 121.3 223 38.1
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 7.5e-22 109.8 166 40.4
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 4.1e-20 104.0 514 27.2
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 5.9e-19 100.1 404 29.0
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 1.5e-14 85.5 408 27.0
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 1.9e-12 78.6 204 31.9
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 5.0e-10 70.5 427 26.0
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 7.3e-09 66.6 273 28.6


User provided reference genes

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