Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 5.4e-145 517.7 269 100.0
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 1.2e-40 171.0 162 50.0
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 1.6e-40 170.6 166 50.0
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 1.0e-39 167.9 170 49.4
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 1.5e-38 164.1 194 45.4
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 9.8e-38 161.4 149 53.0
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 2.2e-37 160.2 149 52.3
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 1.1e-36 157.9 191 45.0
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 2.4e-36 156.8 179 45.8
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 2.4e-36 156.8 182 45.1
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 2.4e-36 156.8 196 44.9
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 4.1e-36 156.0 224 40.6
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 4.1e-36 156.0 179 46.9
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 5.4e-36 155.6 205 40.0
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 7.0e-36 155.2 146 49.3
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 7.0e-36 155.2 187 46.0
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 1.2e-35 154.5 217 40.1
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 1.2e-35 154.5 149 49.0
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 1.6e-35 154.1 190 45.3
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 3.5e-35 152.9 154 47.4
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 3.5e-35 152.9 179 43.0
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 4.5e-35 152.5 207 44.0
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 4.5e-35 152.5 149 47.7
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 7.7e-35 151.8 172 46.5
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 1.0e-34 151.4 176 44.9
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 1.3e-34 151.0 180 44.4
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 1.7e-34 150.6 197 42.6
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 2.3e-34 150.2 149 47.7
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 2.3e-34 150.2 149 47.7
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.3e-34 150.2 179 44.7
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 2.3e-34 150.2 149 47.7
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 2.3e-34 150.2 159 45.3
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 2.9e-34 149.8 149 49.0
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 3.8e-34 149.4 180 44.4
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 3.8e-34 149.4 179 44.1
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 3.8e-34 149.4 179 44.1
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 3.8e-34 149.4 179 44.1
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 3.8e-34 149.4 179 44.1
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 3.8e-34 149.4 151 50.3
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 3.8e-34 149.4 149 47.7
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 5.0e-34 149.1 149 47.0
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 5.0e-34 149.1 149 47.0
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 5.0e-34 149.1 172 45.3
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 5.0e-34 149.1 153 48.4
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 5.0e-34 149.1 201 43.8
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 6.5e-34 148.7 169 45.0
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 8.6e-34 148.3 173 43.4
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 8.6e-34 148.3 179 43.6
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 1.1e-33 147.9 163 44.2
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 1.1e-33 147.9 172 45.3
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 1.1e-33 147.9 172 45.9
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 1.5e-33 147.5 149 47.7
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 1.5e-33 147.5 179 44.1
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 1.5e-33 147.5 157 45.9
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 1.5e-33 147.5 157 45.9
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 1.5e-33 147.5 182 44.5
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 1.5e-33 147.5 172 44.8
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 1.9e-33 147.1 201 41.8
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 1.9e-33 147.1 181 43.1
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 1.9e-33 147.1 184 42.4
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 2.5e-33 146.7 174 44.3
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 2.5e-33 146.7 174 44.3
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 2.5e-33 146.7 155 47.7
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 2.5e-33 146.7 187 41.2
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 3.2e-33 146.4 182 42.9
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 3.2e-33 146.4 153 45.8
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 3.2e-33 146.4 158 46.8
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 4.2e-33 146.0 177 41.8
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 4.2e-33 146.0 174 44.3
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 4.2e-33 146.0 174 44.3
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 4.2e-33 146.0 190 44.2
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 4.2e-33 146.0 177 42.9
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 5.5e-33 145.6 155 47.1
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 5.5e-33 145.6 156 46.8
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 5.5e-33 145.6 160 45.0
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 7.2e-33 145.2 179 43.6
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 7.2e-33 145.2 179 43.0
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 7.2e-33 145.2 196 42.9
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 7.2e-33 145.2 153 45.1
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 7.2e-33 145.2 175 43.4
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 1.2e-32 144.4 170 42.9
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 1.2e-32 144.4 216 38.4
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 2.1e-32 143.7 196 39.8
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 3.6e-32 142.9 182 41.2
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 4.7e-32 142.5 162 44.4
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 8.0e-32 141.7 193 40.4
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 1.4e-31 141.0 166 42.2
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 1.4e-31 141.0 184 40.8
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 2.3e-31 140.2 177 41.8
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 8.8e-31 138.3 206 39.8
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 3.4e-30 136.3 196 37.2
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 4.4e-30 136.0 197 38.6
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 9.8e-30 134.8 177 40.1
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 2.8e-29 133.3 212 38.2
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 2.0e-27 127.1 161 36.0
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 8.6e-26 121.7 106 50.9
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 7.3e-25 118.6 94 56.4
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 9.5e-25 118.2 106 50.9
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.2e-24 117.9 105 49.5
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 2.8e-24 116.7 142 42.3
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 6.1e-24 115.5 179 39.7
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 9.8e-22 108.2 198 33.8
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 2.0e-19 100.5 189 33.9
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 3.5e-19 99.8 210 32.9
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 1.7e-18 97.4 119 44.5
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 3.9e-18 96.3 133 31.6
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 1.2e-14 84.7 86 47.7
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 1.5e-14 84.3 149 34.9
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 2.6e-14 83.6 72 47.2
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 1.4e-12 77.8 75 48.0
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 1.9e-12 77.4 217 28.6
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 1.1e-09 68.2 106 34.0
Cre03.g146167 Chlamydomonas reinhardtii HOM05D001304 ORTHO05D008890 2.5e-09 67.0 172 28.5
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 3.6e-08 63.2 130 33.1
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 2.3e-07 60.5 50 58.0


User provided reference genes

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