Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 1.1e-95 353.2 176 100.0
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 2.0e-84 315.8 169 91.1
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 4.3e-58 228.4 153 70.6
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 1.4e-56 223.4 159 67.9
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 3.0e-56 222.2 158 68.4
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 6.8e-56 221.1 171 64.9
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 6.8e-56 221.1 167 64.1
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 6.8e-56 221.1 162 67.3
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 1.2e-55 220.3 148 69.6
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 2.0e-55 219.5 160 66.2
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 3.4e-55 218.8 160 66.2
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 3.4e-55 218.8 159 65.4
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 5.7e-55 218.0 157 64.3
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 7.5e-55 217.6 149 67.8
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 9.8e-55 217.2 154 65.6
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 9.8e-55 217.2 149 69.1
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 1.7e-54 216.5 163 64.4
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 1.7e-54 216.5 163 64.4
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 1.7e-54 216.5 163 64.4
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 4.9e-54 214.9 165 63.0
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 6.4e-54 214.5 163 63.8
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 6.4e-54 214.5 154 66.2
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 1.1e-53 213.8 159 66.0
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 1.4e-53 213.4 148 66.9
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 2.4e-53 212.6 154 63.6
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 2.4e-53 212.6 152 65.1
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 2.4e-53 212.6 158 63.3
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 3.2e-53 212.2 148 66.2
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 5.4e-53 211.5 148 66.2
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 5.4e-53 211.5 162 63.0
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 5.4e-53 211.5 158 64.6
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 5.4e-53 211.5 149 67.1
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 5.4e-53 211.5 148 68.9
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 7.0e-53 211.1 154 63.0
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 9.2e-53 210.7 148 67.6
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 9.2e-53 210.7 150 66.7
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 1.6e-52 209.9 158 63.9
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 2.0e-52 209.5 148 67.6
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 2.7e-52 209.1 154 63.6
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 2.7e-52 209.1 148 66.9
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 3.5e-52 208.8 162 63.6
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 3.5e-52 208.8 148 67.6
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 3.5e-52 208.8 160 62.5
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 4.6e-52 208.4 154 63.0
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 4.6e-52 208.4 153 66.7
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 5.9e-52 208.0 155 62.6
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 5.9e-52 208.0 149 65.1
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 5.9e-52 208.0 159 64.8
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 5.9e-52 208.0 154 63.0
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 1.0e-51 207.2 148 66.9
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 1.3e-51 206.8 149 65.1
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 1.3e-51 206.8 139 69.8
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 1.7e-51 206.5 162 61.1
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 2.3e-51 206.1 148 66.2
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 2.3e-51 206.1 148 65.5
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 3.9e-51 205.3 171 59.1
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 3.9e-51 205.3 171 59.1
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 5.0e-51 204.9 148 66.9
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 5.0e-51 204.9 148 66.9
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 5.0e-51 204.9 148 66.9
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 6.6e-51 204.5 160 59.4
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 8.6e-51 204.1 149 65.8
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 1.1e-50 203.8 148 66.2
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 1.1e-50 203.8 153 62.1
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 1.5e-50 203.4 152 63.2
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 9.5e-50 200.7 148 65.5
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 9.5e-50 200.7 156 63.5
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 1.2e-49 200.3 148 64.2
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 2.1e-49 199.5 149 63.8
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 2.8e-49 199.1 151 62.9
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 3.6e-49 198.7 154 61.7
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 3.6e-49 198.7 154 64.3
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 6.2e-49 198.0 154 59.7
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 1.4e-48 196.8 165 58.2
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 3.1e-48 195.7 157 60.5
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 5.2e-48 194.9 148 63.5
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 6.8e-48 194.5 148 62.2
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 2.9e-46 189.1 138 65.2
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 4.9e-46 188.3 153 61.4
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 3.2e-45 185.7 161 59.0
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 4.1e-45 185.3 136 64.7
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.6e-44 183.3 134 64.9
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.6e-44 183.3 134 64.9
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 3.5e-44 182.2 124 69.4
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 3.9e-43 178.7 129 66.7
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 8.6e-43 177.6 124 66.1
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 8.6e-43 177.6 148 61.5
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 1.5e-42 176.8 127 64.6
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 1.9e-42 176.4 133 62.4
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 2.5e-42 176.0 149 57.0
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 9.5e-42 174.1 180 52.8
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 3.6e-41 172.2 150 54.7
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 8.9e-40 167.5 148 58.1
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 3.2e-37 159.1 167 53.3
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 1.0e-35 154.1 165 49.7
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 1.7e-35 153.3 148 54.1
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 5.6e-34 148.3 148 53.4
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 8.1e-33 144.4 149 49.7
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 4.0e-32 142.1 148 52.0
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 1.5e-31 140.2 154 46.1
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 1.5e-31 140.2 108 58.3
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 2.2e-30 136.3 110 58.2
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 1.6e-28 130.2 124 54.8
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 6.6e-27 124.8 89 61.8
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 6.6e-27 124.8 152 46.7
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 9.6e-26 120.9 74 75.7
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 3.6e-25 119.0 89 62.9
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 6.9e-24 114.8 81 64.2
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 4.4e-23 112.1 93 59.1
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 1.3e-22 110.5 79 59.5
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 7.4e-10 68.2 79 46.8
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 1.6e-09 67.0 51 58.8
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 1.7e-06 57.0 42 64.3


User provided reference genes

Program Settings