Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 3.1e-79 298.5 163 100.0
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 7.7e-38 161.0 103 74.8
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 1.5e-36 156.8 162 54.3
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 6.1e-35 151.4 115 62.6
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 8.8e-34 147.5 100 68.0
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 2.0e-33 146.4 159 55.3
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 2.0e-33 146.4 167 53.9
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 5.7e-33 144.8 126 57.1
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 9.8e-33 144.1 108 63.9
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 2.2e-32 142.9 126 56.3
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 4.8e-32 141.7 127 55.1
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 1.1e-31 140.6 97 66.0
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 1.8e-31 139.8 97 66.0
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 2.4e-31 139.4 97 67.0
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 3.1e-31 139.0 97 63.9
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 4.1e-31 138.7 156 49.4
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 4.1e-31 138.7 109 58.7
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 7.0e-31 137.9 128 54.7
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 1.6e-30 136.7 97 64.9
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 2.0e-30 136.3 97 62.9
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 2.7e-30 136.0 163 48.5
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 3.5e-30 135.6 155 47.7
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 4.5e-30 135.2 116 59.5
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 7.7e-30 134.4 97 63.9
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 7.7e-30 134.4 162 47.5
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 7.7e-30 134.4 109 58.7
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 1.0e-29 134.0 97 64.9
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 1.0e-29 134.0 97 64.9
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 1.0e-29 134.0 144 50.0
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.0e-29 134.0 93 65.6
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.0e-29 134.0 93 65.6
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.0e-29 134.0 97 62.9
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.0e-29 134.0 97 62.9
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.3e-29 133.7 97 62.9
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.7e-29 133.3 164 48.2
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 2.9e-29 132.5 164 50.0
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 3.8e-29 132.1 159 50.3
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 3.8e-29 132.1 128 53.9
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 5.0e-29 131.7 165 48.5
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 5.0e-29 131.7 171 46.2
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 6.6e-29 131.3 164 48.8
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 6.6e-29 131.3 158 48.1
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 8.6e-29 131.0 127 54.3
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 8.6e-29 131.0 93 64.5
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 8.6e-29 131.0 157 47.8
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 1.1e-28 130.6 129 52.7
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 1.1e-28 130.6 97 62.9
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 1.1e-28 130.6 126 52.4
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.1e-28 130.6 108 60.2
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 1.5e-28 130.2 157 47.1
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 1.5e-28 130.2 163 49.1
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 1.5e-28 130.2 140 49.3
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.5e-28 130.2 124 54.8
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 1.5e-28 130.2 108 59.3
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 1.5e-28 130.2 108 59.3
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 1.9e-28 129.8 165 48.5
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 1.9e-28 129.8 165 48.5
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 1.9e-28 129.8 163 48.5
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 1.9e-28 129.8 122 57.4
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 1.9e-28 129.8 122 56.6
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 1.9e-28 129.8 122 55.7
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 2.5e-28 129.4 97 62.9
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 2.5e-28 129.4 159 47.8
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 2.5e-28 129.4 157 47.1
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 3.3e-28 129.0 109 58.7
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 4.2e-28 128.6 97 61.9
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 4.2e-28 128.6 97 61.9
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 4.2e-28 128.6 97 61.9
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 9.5e-28 127.5 161 50.3
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 9.5e-28 127.5 164 46.3
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 9.5e-28 127.5 161 46.6
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 9.5e-28 127.5 125 52.8
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 9.5e-28 127.5 125 52.8
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 9.5e-28 127.5 157 46.5
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 9.5e-28 127.5 97 61.9
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.2e-27 127.1 93 65.6
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.2e-27 127.1 93 65.6
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.2e-27 127.1 93 65.6
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 1.2e-27 127.1 97 61.9
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.6e-27 126.7 124 53.2
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 2.1e-27 126.3 164 46.3
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 2.8e-27 125.9 93 63.4
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 2.8e-27 125.9 143 51.0
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 4.7e-27 125.2 160 46.9
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 4.7e-27 125.2 160 46.9
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 4.7e-27 125.2 137 51.8
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 6.1e-27 124.8 93 63.4
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 8.0e-27 124.4 162 45.7
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 8.0e-27 124.4 161 46.0
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 1.4e-26 123.6 161 46.0
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 2.3e-26 122.9 161 45.3
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 3.0e-26 122.5 159 47.2
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 3.0e-26 122.5 159 47.2
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 3.0e-26 122.5 165 44.8
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 4.0e-26 122.1 159 45.9
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 4.0e-26 122.1 159 45.9
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 4.0e-26 122.1 159 45.9
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 4.0e-26 122.1 159 45.9
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 8.9e-26 120.9 161 44.1
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 8.9e-26 120.9 159 45.3
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 8.9e-26 120.9 164 47.0
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 8.9e-26 120.9 161 47.2
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 1.2e-25 120.6 157 46.5
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 1.5e-25 120.2 164 45.1
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 1.5e-25 120.2 164 45.1
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 2.0e-25 119.8 165 46.7
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 2.6e-25 119.4 160 46.2
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 2.6e-25 119.4 162 46.9
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 3.4e-25 119.0 164 44.5
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 3.4e-25 119.0 164 44.5
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 3.4e-25 119.0 164 44.5
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 3.4e-25 119.0 164 44.5
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 5.7e-25 118.2 161 47.2
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 7.5e-25 117.9 168 46.4
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 9.8e-25 117.5 154 46.8
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 1.3e-24 117.1 162 45.7
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 2.8e-24 115.9 162 46.3
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 3.7e-24 115.5 156 46.8
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 3.2e-23 112.5 79 63.3
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 1.2e-22 110.5 90 61.1
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 5.9e-22 108.2 92 54.3
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 1.4e-18 97.1 71 59.2
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 4.0e-18 95.5 95 49.5
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 3.5e-14 82.4 97 48.5
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 1.3e-13 80.5 122 43.4
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 8.6e-13 77.8 157 36.9
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 2.4e-07 59.7 50 62.0
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 1.2e-06 57.4 48 62.5
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 1.2e-06 57.4 48 62.5
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 3.5e-06 55.8 63 47.6


User provided reference genes

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