Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 2.2e-64 248.8 126 100.0
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 2.3e-29 132.5 88 71.6
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 6.6e-29 131.0 84 72.6
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 2.5e-28 129.0 88 70.5
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 2.5e-28 129.0 81 72.8
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 4.3e-28 128.3 83 74.7
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 4.3e-28 128.3 85 68.2
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 5.6e-28 127.9 83 72.3
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 7.3e-28 127.5 83 71.1
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 7.3e-28 127.5 83 72.3
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 9.6e-28 127.1 83 72.3
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 9.6e-28 127.1 82 73.2
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 1.2e-27 126.7 85 70.6
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 1.2e-27 126.7 82 72.0
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 1.6e-27 126.3 83 68.7
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 1.6e-27 126.3 90 67.8
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 1.6e-27 126.3 83 72.3
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 1.6e-27 126.3 83 72.3
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 1.6e-27 126.3 78 76.9
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 1.6e-27 126.3 81 72.8
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 2.1e-27 125.9 82 72.0
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 2.1e-27 125.9 83 69.9
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 2.1e-27 125.9 93 63.4
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 2.1e-27 125.9 83 71.1
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 2.1e-27 125.9 83 68.7
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 2.8e-27 125.6 83 67.5
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 3.6e-27 125.2 83 71.1
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 3.6e-27 125.2 83 68.7
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 4.7e-27 124.8 78 71.8
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 4.7e-27 124.8 81 71.6
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 4.7e-27 124.8 83 66.3
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 6.2e-27 124.4 83 72.3
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 6.2e-27 124.4 83 68.7
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 6.2e-27 124.4 81 70.4
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 8.1e-27 124.0 83 71.1
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 8.1e-27 124.0 83 71.1
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 8.1e-27 124.0 83 68.7
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 8.1e-27 124.0 81 71.6
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 1.1e-26 123.6 83 69.9
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 1.1e-26 123.6 92 64.1
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.4e-26 123.2 83 66.3
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 1.4e-26 123.2 83 71.1
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 1.4e-26 123.2 78 74.4
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 1.4e-26 123.2 83 68.7
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 1.4e-26 123.2 83 69.9
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.4e-26 123.2 84 69.0
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.4e-26 123.2 84 69.0
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.8e-26 122.9 83 68.7
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 1.8e-26 122.9 81 71.6
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 1.8e-26 122.9 77 75.3
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 1.8e-26 122.9 83 68.7
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 1.8e-26 122.9 83 68.7
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 1.8e-26 122.9 81 67.9
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 2.4e-26 122.5 78 73.1
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.4e-26 122.5 83 69.9
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 2.4e-26 122.5 81 67.9
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 2.4e-26 122.5 82 72.0
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.1e-26 122.1 81 70.4
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 3.1e-26 122.1 81 70.4
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 3.1e-26 122.1 83 68.7
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 3.1e-26 122.1 83 69.9
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 3.1e-26 122.1 84 67.9
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 4.0e-26 121.7 83 67.5
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 5.2e-26 121.3 78 73.1
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 5.2e-26 121.3 78 73.1
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 5.2e-26 121.3 78 73.1
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 5.2e-26 121.3 83 67.5
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 5.2e-26 121.3 81 70.4
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 6.8e-26 120.9 78 73.1
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 6.8e-26 120.9 85 69.4
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 6.8e-26 120.9 86 65.1
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 8.9e-26 120.6 85 64.7
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.2e-25 120.2 83 68.7
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 1.5e-25 119.8 78 70.5
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 1.5e-25 119.8 83 67.5
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 2.0e-25 119.4 78 71.8
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 2.0e-25 119.4 83 67.5
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 2.6e-25 119.0 81 69.1
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 2.6e-25 119.0 83 66.3
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 2.6e-25 119.0 81 66.7
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 2.6e-25 119.0 81 70.4
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 2.6e-25 119.0 87 66.7
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 2.6e-25 119.0 87 66.7
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 3.4e-25 118.6 78 70.5
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 3.4e-25 118.6 78 70.5
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 3.4e-25 118.6 78 70.5
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 3.4e-25 118.6 78 70.5
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 4.4e-25 118.2 81 66.7
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 4.4e-25 118.2 83 66.3
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 5.8e-25 117.9 83 66.3
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 7.6e-25 117.5 78 69.2
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 1.3e-24 116.7 78 70.5
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 1.7e-24 116.3 81 67.9
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 1.7e-24 116.3 81 65.4
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.7e-24 116.3 75 73.3
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 2.2e-24 115.9 76 73.7
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 2.9e-24 115.5 81 66.7
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 3.8e-24 115.2 76 71.1
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 4.9e-24 114.8 81 64.2
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 6.4e-24 114.4 91 59.3
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 4.3e-20 101.7 74 63.5
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 7.6e-17 90.9 68 60.3
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 9.3e-15 84.0 72 56.9
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 2.1e-14 82.8 72 51.4
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 3.5e-14 82.0 48 79.2
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.7e-13 79.7 58 60.3
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.3e-13 79.3 64 57.8
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 5.3e-10 68.2 49 67.3


User provided reference genes

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