Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g2795 Chara braunii HOM05D006535 ORTHO05D008548 2.3e-94 349.0 186 100.0
AagrBONN_evm.TU.Sc2ySwM_117.3852 Anthoceros agrestis HOM05D006535 ORTHO05D008548 3.6e-31 139.0 166 46.4
Mapoly0112s0027 Marchantia polymorpha HOM05D006535 ORTHO05D008548 4.7e-31 138.7 170 46.5
Nitab4.5_0002668g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 1.0e-30 137.5 147 46.9
SEGI_21824 Sequoiadendron giganteum HOM05D006535 ORTHO05D008548 2.3e-30 136.3 179 43.6
PGSC0003DMG402021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 2.3e-30 136.3 170 44.1
SMO367G0626 Selaginella moellendorffii HOM05D000208 ORTHO05D008548 3.0e-30 136.0 161 45.3
CAN.G23.21 Capsicum annuum HOM05D006535 ORTHO05D008548 4.0e-30 135.6 170 41.8
Medtr2g024310 Medicago truncatula HOM05D006535 ORTHO05D008548 5.2e-30 135.2 162 43.2
Phvul.006G146200 Phaseolus vulgaris HOM05D006535 ORTHO05D008548 6.8e-30 134.8 166 43.4
HPP92_010356 Vanilla planifolia HOM05D006535 ORTHO05D008548 8.8e-30 134.4 164 45.7
BcaC01g04564 Brassica carinata HOM05D006535 ORTHO05D008548 1.5e-29 133.7 184 41.8
Sp6g04530 Schrenkiella parvula HOM05D006535 ORTHO05D008548 1.5e-29 133.7 188 41.5
Atru.chr10.2274 Acer truncatum HOM05D006535 ORTHO05D008548 2.0e-29 133.3 114 54.4
Peaxi162Scf00294g01013 Petunia axillaris HOM05D006535 ORTHO05D008548 2.0e-29 133.3 170 41.8
Lj6g0003188 Lotus japonicus HOM05D006535 ORTHO05D008548 2.6e-29 132.9 115 53.9
Sc05g0009420 Simmondsia chinensis HOM05D006535 ORTHO05D008548 2.6e-29 132.9 176 41.5
THA.LOC104812977 Tarenaya hassleriana HOM05D006535 ORTHO05D008548 3.4e-29 132.5 183 40.4
VMungo0540G1326 Vigna mungo HOM05D006535 ORTHO05D008548 3.4e-29 132.5 173 41.0
Thhalv10028619m.g Eutrema salsugineum HOM05D006535 ORTHO05D008548 4.4e-29 132.1 185 42.2
Glyma.15G111500 Glycine max HOM05D006535 ORTHO05D008548 4.4e-29 132.1 166 42.2
A03p29930 Brassica napus HOM05D006535 ORTHO05D008548 5.7e-29 131.7 184 41.3
Nn1g07251 Nelumbo nucifera HOM05D006535 ORTHO05D008548 7.5e-29 131.3 117 53.0
Pp3c1_9420 Physcomitrium patens HOM05D006535 ORTHO05D008548 1.3e-28 130.6 114 55.3
Potri.004G005500 Populus trichocarpa HOM05D006535 ORTHO05D008548 1.3e-28 130.6 163 43.6
Aqoxy1G03005 Aquilegia oxysepala HOM05D006535 ORTHO05D008548 1.7e-28 130.2 117 52.1
Carub.0006s3215 Capsella rubella HOM05D006535 ORTHO05D008548 1.7e-28 130.2 187 41.2
AUR62012752 Chenopodium quinoa HOM05D006535 ORTHO05D008548 1.7e-28 130.2 184 42.9
Actinidia11871 Actinidia chinensis HOM05D006535 ORTHO05D008548 2.2e-28 129.8 163 44.8
C03p36220 Brassica napus HOM05D006535 ORTHO05D008548 2.2e-28 129.8 119 52.1
BolC3t15931H Brassica oleracea HOM05D006535 ORTHO05D008548 2.2e-28 129.8 119 52.1
BraA03t12182Z Brassica rapa HOM05D006535 ORTHO05D008548 2.2e-28 129.8 119 52.1
AT4G04320 Arabidopsis thaliana HOM05D006535 ORTHO05D008548 2.8e-28 129.4 119 52.9
CANSAT56G3727 Cannabis sativa HOM05D006535 ORTHO05D008548 2.8e-28 129.4 182 39.0
TPR.G13151 Trifolium pratense HOM05D006535 ORTHO05D008548 2.8e-28 129.4 111 53.2
BcaB01g02601 Brassica carinata HOM05D006535 ORTHO05D008548 3.7e-28 129.0 119 52.1
CiPaw.09G097300 Carya illinoinensis HOM05D006535 ORTHO05D008548 3.7e-28 129.0 180 40.6
vmacro15802 Vaccinium macrocarpon HOM05D006535 ORTHO05D008548 3.7e-28 129.0 164 46.3
Ca_00689_v3 Cicer arietinum L. HOM05D006535 ORTHO05D008548 4.8e-28 128.6 117 51.3
Haze_06851 Corylus avellana HOM05D006535 ORTHO05D008548 4.8e-28 128.6 129 48.8
Psat1g177760 Pisum sativum HOM05D006535 ORTHO05D008548 4.8e-28 128.6 167 43.1
Manes.17G027900 Manihot esculenta HOM05D006535 ORTHO05D008548 6.3e-28 128.3 162 42.0
RcHm_v2.0_Chr5g0002321 Rosa chinensis HOM05D006535 ORTHO05D008548 6.3e-28 128.3 113 54.0
CARHR253140 Cardamine hirsuta HOM05D006535 ORTHO05D008548 8.3e-28 127.9 119 51.3
AL6G47860 Arabidopsis lyrata HOM05D006535 ORTHO05D008548 1.1e-27 127.5 119 52.1
arahy.Tifrunner.gnm1.ann1.P3I999 Arachis hypogaea HOM05D006535 ORTHO05D008548 1.1e-27 127.5 110 53.6
AUR62021906 Chenopodium quinoa HOM05D006535 ORTHO05D008548 1.1e-27 127.5 185 43.2
Glyma.09G007100 Glycine max HOM05D006535 ORTHO05D008548 1.1e-27 127.5 113 51.3
Potri.011G010400 Populus trichocarpa HOM05D006535 ORTHO05D008548 1.1e-27 127.5 180 41.7
Thecc.06G227200 Theobroma cacao HOM05D006535 ORTHO05D008548 1.1e-27 127.5 114 50.9
Migut.H01587 Erythranthe guttata HOM05D006535 ORTHO05D008548 1.4e-27 127.1 170 42.4
Cfa000168 Carpinus fangiana HOM05D006535 ORTHO05D008548 1.8e-27 126.7 111 54.1
Oeu049693.4 Olea europaea HOM05D006535 ORTHO05D008548 1.8e-27 126.7 117 51.3
PSO541G2423 Papaver somniferum HOM05D006535 ORTHO05D008548 1.8e-27 126.7 178 41.0
QL05p072061 Quercus lobata HOM05D006535 ORTHO05D008548 1.8e-27 126.7 189 40.2
Hma1.2p1_1358F.1_g277940 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 2.4e-27 126.3 132 48.5
Lalb_Chr18g0056581 Lupinus albus HOM05D006535 ORTHO05D008548 2.4e-27 126.3 114 51.8
Hund23439 Selenicereus undatus HOM05D006535 ORTHO05D008548 3.1e-27 125.9 176 42.0
TWI38G0380 Tripterygium wilfordii HOM05D006535 ORTHO05D008548 3.1e-27 125.9 111 54.1
ATR0686G032 Amborella trichopoda HOM05D006535 ORTHO05D008548 5.4e-27 125.2 169 42.0
COL.COLO4_37574 Corchorus olitorius HOM05D006535 ORTHO05D008548 5.4e-27 125.2 117 50.4
Prupe.4G015900 Prunus persica HOM05D006535 ORTHO05D008548 5.4e-27 125.2 182 40.7
TAR626G0131 Trochodendron aralioides HOM05D006535 ORTHO05D008548 5.4e-27 125.2 166 42.8
MD05G1351700 Malus domestica HOM05D006535 ORTHO05D008548 7.0e-27 124.8 114 51.8
PGR042G2820 Punica granatum HOM05D006535 ORTHO05D008548 7.0e-27 124.8 113 52.2
Rhsim02G0105100 Rhododendron simsii HOM05D006535 ORTHO05D008548 7.0e-27 124.8 169 44.4
Eucgr.E03992 Eucalyptus grandis HOM05D006535 ORTHO05D008548 9.1e-27 124.4 171 39.2
Aa31LG9G9880 Aethionema arabicum HOM05D006535 ORTHO05D008548 1.2e-26 124.0 182 41.8
MELO3C021729.2 Cucumis melo HOM05D006535 ORTHO05D008548 1.2e-26 124.0 170 40.6
FvH4_3g01470 Fragaria vesca HOM05D006535 ORTHO05D008548 1.2e-26 124.0 128 48.4
MSTRG.14630 Avicennia marina HOM05D006535 ORTHO05D008548 2.0e-26 123.2 170 37.6
ClCG01G009650 Citrullus lanatus HOM05D006535 ORTHO05D008548 2.0e-26 123.2 110 51.8
ECA248G3623 Erigeron canadensis HOM05D006535 ORTHO05D008548 2.0e-26 123.2 125 49.6
Gohir.A10G011200 Gossypium hirsutum HOM05D006535 ORTHO05D008548 2.0e-26 123.2 107 52.3
Ah.09g234560 Amaranthus hybridus HOM05D006535 ORTHO05D008548 3.5e-26 122.5 110 51.8
Dinv13934 Davidia involucrata HOM05D006535 ORTHO05D008548 3.5e-26 122.5 114 51.8
GSVIVG01012659001 Vitis vinifera HOM05D006535 ORTHO05D008548 3.5e-26 122.5 110 53.6
Cc09_g01280 Coffea canephora HOM05D006535 ORTHO05D008548 4.5e-26 122.1 111 52.3
Zm00001eb099100 Zea mays HOM05D006535 ORTHO05D008548 4.5e-26 122.1 114 51.8
Gohir.D10G010800 Gossypium hirsutum HOM05D006535 ORTHO05D008548 7.7e-26 121.3 107 52.3
Lsat_1_v5_gn_1_129581 Lactuca sativa HOM05D006535 ORTHO05D008548 7.7e-26 121.3 110 55.5
Gorai.011G011900 Gossypium raimondii HOM05D006535 ORTHO05D008548 1.0e-25 120.9 107 52.3
Lj1C1235T17 Lonicera japonica HOM05D006535 ORTHO05D008548 1.3e-25 120.6 111 53.2
CsaV3_1G046130 Cucumis sativus L. HOM05D006535 ORTHO05D008548 1.7e-25 120.2 173 40.5
HanXRQChr01g0006511 Helianthus annuus HOM05D006535 ORTHO05D008548 1.7e-25 120.2 107 54.2
Os09g0394100 Oryza sativa ssp. japonica HOM05D006535 ORTHO05D008548 2.3e-25 119.8 101 52.5
SGA_v2.0_scaffold89G27482 Striga asiatica HOM05D006535 ORTHO05D008548 2.3e-25 119.8 147 40.8
Duzib235G1465 Durio zibethinus HOM05D006535 ORTHO05D008548 1.1e-24 117.5 107 50.5
DCAR_024986 Daucus carota HOM05D006535 ORTHO05D008548 1.5e-24 117.1 107 50.5
unitig_61.g26097 Utricularia gibba HOM05D006535 ORTHO05D008548 1.5e-24 117.1 114 46.5
Sed0002831 Sechium edule HOM05D006535 ORTHO05D008548 5.5e-24 115.2 179 39.1
EL10Ac8g20123 Beta vulgaris HOM05D006535 ORTHO05D008548 9.5e-24 114.4 143 44.1
CDE06G1909 Ceratophyllum demersum HOM05D006535 ORTHO05D008548 1.6e-23 113.6 117 46.2
Ciclev10015047m.g Citrus clementina HOM05D006535 ORTHO05D008548 4.7e-23 112.1 146 42.5
arahy.Tifrunner.gnm1.ann1.H9DKU3 Arachis hypogaea HOM05D006535 ORTHO05D008548 1.4e-22 110.5 87 57.5
Eucgr.E03995 Eucalyptus grandis HOM05D006535 ORTHO05D000824 2.3e-22 109.8 91 56.0
Cpa.g.c42047 Carica papaya HOM05D006535 ORTHO05D008548 1.1e-19 100.9 76 60.5
Solyc02g036290.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.4e-19 100.5 90 51.1
Cre02.g145200 Chlamydomonas reinhardtii HOM05D006535 ORTHO05D008548 5.9e-18 95.1 93 52.7
BolC9t56193H Brassica oleracea HOM05D006535 ORTHO05D008548 3.6e-15 85.9 65 56.9
C09p33590 Brassica napus HOM05D006535 ORTHO05D008548 2.0e-13 80.1 59 57.6
FAN21G0938 Fragaria x ananassa HOM05D006535 ORTHO05D008548 5.8e-13 78.6 128 35.9
FAN25G2414 Fragaria x ananassa HOM05D006535 ORTHO05D008548 2.9e-12 76.3 128 36.7
Prupe.I000100 Prunus persica HOM05D006535 ORTHO05D008548 1.3e-09 67.4 130 34.6
Nitab4.5_0017473g0010 Nicotiana tabacum HOM05D006535 ORTHO05D008548 3.9e-09 65.9 139 30.9


User provided reference genes

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