Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g2794 Chara braunii HOM05D006535 ORTHO05D008548 0.0e+00 1208.7 605 100.0
CBR_g63085 Chara braunii HOM05D001740 ORTHO05D001468 4.0e-180 635.6 347 93.9
CBR_g19287 Chara braunii HOM05D001740 ORTHO05D001468 8.7e-111 405.2 338 62.1
CBR_g49217 Chara braunii HOM05D001740 ORTHO05D001468 2.0e-107 394.0 334 63.2
CBR_g49312 Chara braunii HOM05D001740 ORTHO05D001468 2.0e-107 394.0 292 70.2
CBR_g38879 Chara braunii HOM05D001740 ORTHO05D001468 2.5e-102 377.1 272 72.1
CBR_g38157 Chara braunii HOM05D001740 ORTHO05D001468 2.3e-95 354.0 311 61.1
CBR_g148 Chara braunii HOM05D001740 ORTHO05D001468 8.8e-95 352.1 362 56.1
CBR_g51478 Chara braunii HOM05D001740 ORTHO05D001468 7.0e-84 315.8 342 52.0
AagrBONN_evm.TU.Sc2ySwM_117.3852 Anthoceros agrestis HOM05D006535 ORTHO05D008548 8.3e-69 265.8 266 53.4
SMO367G0626 Selaginella moellendorffii HOM05D000208 ORTHO05D008548 1.1e-68 265.4 268 50.4
Pp3c1_9420 Physcomitrium patens HOM05D006535 ORTHO05D008548 7.0e-68 262.7 248 53.6
Mapoly0112s0027 Marchantia polymorpha HOM05D006535 ORTHO05D008548 9.5e-65 252.3 255 52.5
Cc09_g01280 Coffea canephora HOM05D006535 ORTHO05D008548 5.4e-60 236.5 240 50.8
MD05G1351700 Malus domestica HOM05D006535 ORTHO05D008548 4.5e-59 233.4 277 46.2
QL05p072061 Quercus lobata HOM05D006535 ORTHO05D008548 7.8e-59 232.6 252 47.2
PGR042G2820 Punica granatum HOM05D006535 ORTHO05D008548 1.0e-58 232.3 256 46.5
SEGI_21824 Sequoiadendron giganteum HOM05D006535 ORTHO05D008548 1.0e-58 232.3 264 47.7
Haze_06851 Corylus avellana HOM05D006535 ORTHO05D008548 6.6e-58 229.6 243 48.1
Aqoxy1G03005 Aquilegia oxysepala HOM05D006535 ORTHO05D008548 1.9e-57 228.0 241 49.0
TWI38G0380 Tripterygium wilfordii HOM05D006535 ORTHO05D008548 1.9e-57 228.0 242 48.3
CANSAT56G3727 Cannabis sativa HOM05D006535 ORTHO05D008548 4.3e-57 226.9 242 47.1
Cfa000168 Carpinus fangiana HOM05D006535 ORTHO05D008548 5.6e-57 226.5 243 47.3
CiPaw.09G097300 Carya illinoinensis HOM05D006535 ORTHO05D008548 5.6e-57 226.5 258 46.5
Sabra04G0002800 Salix brachista HOM05D006535 ORTHO05D008548 5.6e-57 226.5 241 49.0
Thecc.06G227200 Theobroma cacao HOM05D006535 ORTHO05D008548 5.6e-57 226.5 274 44.9
BcaB01g02601 Brassica carinata HOM05D006535 ORTHO05D008548 7.3e-57 226.1 267 46.4
Zm00001eb099100 Zea mays HOM05D006535 ORTHO05D008548 9.5e-57 225.7 244 50.0
arahy.Tifrunner.gnm1.ann1.P3I999 Arachis hypogaea HOM05D006535 ORTHO05D008548 1.2e-56 225.3 275 42.9
RcHm_v2.0_Chr5g0002321 Rosa chinensis HOM05D006535 ORTHO05D008548 1.2e-56 225.3 274 45.3
Sc05g0009420 Simmondsia chinensis HOM05D006535 ORTHO05D008548 1.2e-56 225.3 261 46.4
COL.COLO4_37574 Corchorus olitorius HOM05D006535 ORTHO05D008548 1.6e-56 224.9 274 44.2
Prupe.I000100 Prunus persica HOM05D006535 ORTHO05D008548 2.1e-56 224.6 276 45.3
Ciclev10015047m.g Citrus clementina HOM05D006535 ORTHO05D008548 2.8e-56 224.2 267 45.7
PGSC0003DMG401021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 2.8e-56 224.2 241 48.1
arahy.Tifrunner.gnm1.ann1.H9DKU3 Arachis hypogaea HOM05D006535 ORTHO05D008548 3.6e-56 223.8 275 42.9
ECA248G3623 Erigeron canadensis HOM05D006535 ORTHO05D008548 3.6e-56 223.8 241 48.1
Glyma.15G111500 Glycine max HOM05D006535 ORTHO05D008548 3.6e-56 223.8 255 45.9
Potri.004G005500 Populus trichocarpa HOM05D006535 ORTHO05D008548 3.6e-56 223.8 241 49.8
TAR626G0131 Trochodendron aralioides HOM05D006535 ORTHO05D008548 3.6e-56 223.8 256 47.3
AT4G04320 Arabidopsis thaliana HOM05D006535 ORTHO05D008548 4.7e-56 223.4 240 48.3
Duzib235G1465 Durio zibethinus HOM05D006535 ORTHO05D008548 6.1e-56 223.0 279 44.1
Lalb_Chr18g0056581 Lupinus albus HOM05D006535 ORTHO05D008548 6.1e-56 223.0 246 46.7
Phvul.006G146200 Phaseolus vulgaris HOM05D006535 ORTHO05D008548 6.1e-56 223.0 266 44.4
AUR62012752 Chenopodium quinoa HOM05D006535 ORTHO05D008548 8.0e-56 222.6 275 44.4
Hma1.2p1_1358F.1_g277940 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 8.0e-56 222.6 243 47.3
Manes.17G027900 Manihot esculenta HOM05D006535 ORTHO05D008548 8.0e-56 222.6 264 44.7
Nitab4.5_0000005g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 8.0e-56 222.6 241 47.3
PSO541G2423 Papaver somniferum HOM05D006535 ORTHO05D008548 8.0e-56 222.6 244 48.8
Sp6g04530 Schrenkiella parvula HOM05D006535 ORTHO05D008548 1.0e-55 222.2 274 43.8
MSTRG.14630 Avicennia marina HOM05D006535 ORTHO05D008548 1.4e-55 221.9 256 45.3
FvH4_3g01470 Fragaria vesca HOM05D006535 ORTHO05D008548 1.4e-55 221.9 270 44.4
Glyma.09G007100 Glycine max HOM05D006535 ORTHO05D008548 1.4e-55 221.9 255 45.1
HanXRQChr01g0006511 Helianthus annuus HOM05D006535 ORTHO05D008548 1.4e-55 221.9 241 47.3
Lj6g0003188 Lotus japonicus HOM05D006535 ORTHO05D008548 1.4e-55 221.9 260 45.8
Eucgr.E03992 Eucalyptus grandis HOM05D006535 ORTHO05D008548 1.8e-55 221.5 271 45.8
Lsat_1_v5_gn_1_129581 Lactuca sativa HOM05D006535 ORTHO05D008548 2.3e-55 221.1 240 46.7
AUR62021906 Chenopodium quinoa HOM05D006535 ORTHO05D008548 3.0e-55 220.7 231 48.9
BraA03t12182Z Brassica rapa HOM05D006535 ORTHO05D008548 4.0e-55 220.3 274 44.5
CARHR253140 Cardamine hirsuta HOM05D006535 ORTHO05D008548 4.0e-55 220.3 247 48.2
Aa31LG9G9880 Aethionema arabicum HOM05D006535 ORTHO05D008548 6.8e-55 219.5 256 44.9
Gohir.D10G010800 Gossypium hirsutum HOM05D006535 ORTHO05D008548 6.8e-55 219.5 263 44.5
AL6G47860 Arabidopsis lyrata HOM05D006535 ORTHO05D008548 8.9e-55 219.2 248 48.0
Dinv13934 Davidia involucrata HOM05D006535 ORTHO05D008548 8.9e-55 219.2 241 46.1
FAN21G0938 Fragaria x ananassa HOM05D006535 ORTHO05D008548 1.2e-54 218.8 270 44.1
Gorai.011G011900 Gossypium raimondii HOM05D006535 ORTHO05D008548 1.2e-54 218.8 263 44.5
Nn1g07251 Nelumbo nucifera HOM05D006535 ORTHO05D008548 1.5e-54 218.4 356 39.0
A03p29930 Brassica napus HOM05D006535 ORTHO05D008548 2.0e-54 218.0 267 44.9
Nitab4.5_0002668g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 2.0e-54 218.0 241 46.5
VMungo0540G1326 Vigna mungo HOM05D006535 ORTHO05D008548 2.0e-54 218.0 254 44.1
CsaV3_1G046130 Cucumis sativus L. HOM05D006535 ORTHO05D008548 3.4e-54 217.2 251 46.6
Migut.H01587 Erythranthe guttata HOM05D006535 ORTHO05D008548 3.4e-54 217.2 250 44.8
Gohir.A10G011200 Gossypium hirsutum HOM05D006535 ORTHO05D008548 3.4e-54 217.2 263 44.1
Hma1.2p1_1358F.1_g277950 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 3.4e-54 217.2 231 48.1
Ah.09g234560 Amaranthus hybridus HOM05D006535 ORTHO05D008548 4.4e-54 216.9 262 46.6
Carub.0006s3215 Capsella rubella HOM05D006535 ORTHO05D008548 4.4e-54 216.9 242 47.1
Ca_00689_v3 Cicer arietinum L. HOM05D006535 ORTHO05D008548 4.4e-54 216.9 257 43.6
Os09g0394100 Oryza sativa ssp. japonica HOM05D006535 ORTHO05D008548 5.8e-54 216.5 227 51.1
MELO3C021729.2 Cucumis melo HOM05D006535 ORTHO05D008548 7.5e-54 216.1 238 47.9
Psat1g177760 Pisum sativum HOM05D006535 ORTHO05D008548 9.8e-54 215.7 261 42.9
Hund23439 Selenicereus undatus HOM05D006535 ORTHO05D008548 9.8e-54 215.7 265 44.5
unitig_61.g26097 Utricularia gibba HOM05D006535 ORTHO05D008548 9.8e-54 215.7 249 47.4
HPP92_010356 Vanilla planifolia HOM05D006535 ORTHO05D008548 9.8e-54 215.7 265 45.3
GSVIVG01012659001 Vitis vinifera HOM05D006535 ORTHO05D008548 9.8e-54 215.7 240 47.1
BcaC01g04564 Brassica carinata HOM05D006535 ORTHO05D008548 1.3e-53 215.3 267 45.3
BolC3t15931H Brassica oleracea HOM05D006535 ORTHO05D008548 1.3e-53 215.3 267 45.3
ATR0686G032 Amborella trichopoda HOM05D006535 ORTHO05D008548 1.7e-53 214.9 252 46.4
C03p36220 Brassica napus HOM05D006535 ORTHO05D008548 1.7e-53 214.9 267 45.3
THA.LOC104812977 Tarenaya hassleriana HOM05D006535 ORTHO05D008548 1.7e-53 214.9 252 45.6
DCAR_024986 Daucus carota HOM05D006535 ORTHO05D008548 2.9e-53 214.2 243 47.7
TPR.G33068 Trifolium pratense HOM05D006535 ORTHO05D008548 3.7e-53 213.8 254 44.5
EL10Ac8g20123 Beta vulgaris HOM05D006535 ORTHO05D008548 6.4e-53 213.0 212 50.5
Sed0002831 Sechium edule HOM05D006535 ORTHO05D008548 6.4e-53 213.0 240 46.2
ClCG01G009650 Citrullus lanatus HOM05D006535 ORTHO05D008548 1.4e-52 211.8 244 47.1
CAN.G23.21 Capsicum annuum HOM05D006535 ORTHO05D008548 3.2e-52 210.7 240 45.4
Actinidia11871 Actinidia chinensis HOM05D006535 ORTHO05D008548 5.4e-52 209.9 260 43.5
Rhsim02G0105100 Rhododendron simsii HOM05D006535 ORTHO05D008548 7.0e-52 209.5 243 44.0
Thhalv10028619m.g Eutrema salsugineum HOM05D006535 ORTHO05D008548 1.6e-51 208.4 248 46.8
Potri.011G010400 Populus trichocarpa HOM05D006535 ORTHO05D008548 2.0e-51 208.0 272 43.0
Medtr2g024310 Medicago truncatula HOM05D006535 ORTHO05D008548 2.7e-51 207.6 243 44.4
vmacro15802 Vaccinium macrocarpon HOM05D006535 ORTHO05D008548 1.3e-50 205.3 244 42.2
FAN25G2414 Fragaria x ananassa HOM05D006535 ORTHO05D008548 1.2e-48 198.7 252 43.7
CDE06G1909 Ceratophyllum demersum HOM05D006535 ORTHO05D008548 7.5e-46 189.5 241 43.6
CBR_g50343 Chara braunii HOM05D001740 ORTHO05D001468 8.3e-45 186.0 377 35.3
CBR_g48629 Chara braunii HOM05D001740 ORTHO05D001468 2.3e-42 177.9 289 37.7
CBR_g3799 Chara braunii HOM05D001740 ORTHO05D000596 2.5e-41 174.5 232 48.7
Oeu049693.4 Olea europaea HOM05D006535 ORTHO05D008548 2.8e-40 171.0 221 42.5
CBR_g6711 Chara braunii HOM05D006907 ORTHO05D008598 2.3e-39 167.9 270 38.9
CBR_g39990 Chara braunii HOM05D001740 ORTHO05D132535 9.2e-36 156.0 264 39.4
CBR_g21054 Chara braunii HOM05D001740 ORTHO05D001468 6.2e-32 143.3 158 46.8
CBR_g34494 Chara braunii HOM05D001740 ORTHO05D001468 1.8e-31 141.7 386 32.1
CBR_g35039 Chara braunii HOM05D001740 ORTHO05D001468 1.2e-30 139.0 391 31.5
Lj1C1235T17 Lonicera japonica HOM05D006535 ORTHO05D008548 7.6e-30 136.3 189 41.8
CBR_g34353 Chara braunii HOM05D001740 ORTHO05D001468 4.1e-28 130.6 285 33.0
CBR_g40747 Chara braunii HOM05D001740 ORTHO05D001468 1.9e-25 121.7 244 34.0
CBR_g12784 Chara braunii HOM05D001740 ORTHO05D001468 3.3e-25 120.9 194 41.2
CBR_g6292 Chara braunii HOM05D001740 ORTHO05D001468 3.3e-25 120.9 364 29.4
CBR_g17594 Chara braunii HOM05D001740 ORTHO05D001468 5.2e-23 113.6 264 32.2
CBR_g63086 Chara braunii HOM05D001740 ORTHO05D001468 2.6e-22 111.3 257 31.5
CBR_g22898 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-21 109.0 118 53.4
CBR_g12740 Chara braunii HOM05D001740 ORTHO05D000004 4.9e-21 107.1 253 27.3
CBR_g21838 Chara braunii HOM05D001740 ORTHO05D001468 1.9e-20 105.1 301 31.6
CBR_g23405 Chara braunii HOM05D001740 ORTHO05D001468 2.1e-19 101.7 218 36.2
CBR_g5649 Chara braunii HOM05D005562 ORTHO05D001468 6.0e-19 100.1 85 50.6
CBR_g3419 Chara braunii HOM05D001740 ORTHO05D001468 5.1e-18 97.1 276 33.0
CBR_g38831 Chara braunii HOM05D001740 ORTHO05D001468 1.1e-17 95.9 281 32.7
CBR_g3694 Chara braunii HOM05D001740 ORTHO05D001468 7.3e-17 93.2 218 33.9
CBR_g37110 Chara braunii HOM05D001740 ORTHO05D001468 1.6e-16 92.0 215 29.3
CBR_g29658 Chara braunii HOM05D001740 ORTHO05D001468 2.1e-16 91.7 250 31.6
CBR_g4847 Chara braunii HOM05D001740 ORTHO05D001468 2.8e-16 91.3 287 29.6
CBR_g3872 Chara braunii HOM05D001740 ORTHO05D001468 3.6e-16 90.9 217 34.1
CBR_g48350 Chara braunii HOM05D001740 ORTHO05D001468 6.2e-16 90.1 155 39.4
CBR_g32151 Chara braunii HOM05D000003 ORTHO05D000004 1.1e-15 89.4 337 28.2
Cre02.g145200 Chlamydomonas reinhardtii HOM05D006535 ORTHO05D008548 6.9e-15 86.7 329 25.2
Peaxi162Scf00294g01013 Petunia axillaris HOM05D006535 ORTHO05D008548 2.2e-13 81.6 50 70.0
CBR_g50932 Chara braunii HOM05D000003 ORTHO05D001468 6.4e-13 80.1 237 27.4
CBR_g54643 Chara braunii HOM05D001740 ORTHO05D001468 8.4e-13 79.7 362 24.9
CBR_g19256 Chara braunii HOM05D015301 ORTHO05D017361 4.2e-12 77.4 131 38.9
CBR_g54644 Chara braunii HOM05D001740 ORTHO05D001468 1.6e-11 75.5 68 51.5
CBR_g207 Chara braunii HOM05D001740 ORTHO05D001468 2.7e-11 74.7 187 24.6
CBR_g45405 Chara braunii HOM05D001740 ORTHO05D001468 6.0e-11 73.6 308 26.6
CBR_g18993 Chara braunii HOM05D001740 ORTHO05D002709 7.9e-11 73.2 70 44.3
CBR_g38737 Chara braunii HOM05D001740 ORTHO05D001468 1.8e-10 72.0 276 26.8
CBR_g41105 Chara braunii HOM05D001740 ORTHO05D001468 3.9e-10 70.9 171 26.9
CBR_g23702 Chara braunii HOM05D001740 ORTHO05D001468 6.7e-10 70.1 87 37.9
CBR_g3089 Chara braunii HOM05D001740 ORTHO05D001468 6.7e-10 70.1 283 25.4
CBR_g18902 Chara braunii HOM05D000019 ORTHO05D003552 7.4e-09 66.6 56 62.5
CBR_g57306 Chara braunii HOM05D001740 ORTHO05D001468 7.4e-09 66.6 253 24.5
CBR_g45317 Chara braunii HOM05D000003 ORTHO05D000004 9.6e-09 66.2 170 24.7
CBR_g50818 Chara braunii HOM05D001740 ORTHO05D136129 6.2e-08 63.5 294 25.2
CBR_g37000 Chara braunii HOM05D001740 ORTHO05D132640 1.1e-07 62.8 292 24.0
CBR_g29822 Chara braunii HOM05D001740 ORTHO05D001468 1.8e-07 62.0 179 25.1
CBR_g29975 Chara braunii HOM05D001740 ORTHO05D001468 1.8e-07 62.0 193 25.4
CBR_g28826 Chara braunii HOM05D001740 ORTHO05D001468 2.4e-07 61.6 280 25.0
CBR_g39608 Chara braunii HOM05D001740 ORTHO05D001468 4.0e-07 60.8 373 23.1
CBR_g8572 Chara braunii HOM05D000785 ORTHO05D000231 6.9e-07 60.1 272 23.5
CBR_g45843 Chara braunii HOM05D001740 ORTHO05D001468 1.2e-06 59.3 118 29.7
CBR_g9157 Chara braunii HOM05D001740 ORTHO05D134701 1.2e-06 59.3 206 23.3
CBR_g46436 Chara braunii HOM05D001740 ORTHO05D132841 1.5e-06 58.9 194 24.7
CBR_g31186 Chara braunii HOM05D001740 ORTHO05D000004 3.4e-06 57.8 237 21.5
CBR_g44446 Chara braunii HOM05D001740 ORTHO05D134070 3.4e-06 57.8 308 23.4
CBR_g52294 Chara braunii HOM05D001740 ORTHO05D131510 7.6e-06 56.6 344 22.7


User provided reference genes

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