Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 6.0e-33 143.7 76 100.0
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 5.8e-12 73.9 74 56.8
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 7.6e-12 73.6 74 55.4
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 3.0e-08 61.6 55 58.2
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 1.5e-07 59.3 69 47.8
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 1.5e-07 59.3 58 51.7
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 1.9e-07 58.9 49 57.1
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 3.3e-07 58.2 60 50.0
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 3.3e-07 58.2 53 54.7
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 4.3e-07 57.8 53 52.8
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 4.3e-07 57.8 60 50.0
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 4.3e-07 57.8 60 50.0
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 5.6e-07 57.4 60 50.0
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 5.6e-07 57.4 60 50.0
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 5.6e-07 57.4 60 50.0
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 5.6e-07 57.4 64 48.4
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 7.3e-07 57.0 53 52.8
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 7.3e-07 57.0 53 49.1
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 7.3e-07 57.0 46 60.9
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 9.6e-07 56.6 49 55.1
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 9.6e-07 56.6 49 57.1
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 9.6e-07 56.6 46 58.7
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 1.2e-06 56.2 53 52.8
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 1.6e-06 55.8 53 52.8
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 2.1e-06 55.5 57 50.9
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 2.1e-06 55.5 46 56.5
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 2.8e-06 55.1 43 58.1
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 2.8e-06 55.1 53 52.8
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 2.8e-06 55.1 52 50.0
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.8e-06 55.1 52 50.0
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.8e-06 55.1 52 50.0
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.8e-06 55.1 52 50.0
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 2.8e-06 55.1 55 50.9
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 2.8e-06 55.1 54 48.1
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 2.8e-06 55.1 53 50.9
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 2.8e-06 55.1 43 58.1
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 2.8e-06 55.1 46 58.7
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 3.6e-06 54.7 53 49.1
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 3.6e-06 54.7 53 52.8
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 3.6e-06 54.7 43 55.8
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 3.6e-06 54.7 41 61.0
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 3.6e-06 54.7 46 56.5
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 4.7e-06 54.3 46 56.5
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 4.7e-06 54.3 46 56.5
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 4.7e-06 54.3 53 50.9
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 4.7e-06 54.3 53 50.9
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 4.7e-06 54.3 43 55.8
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 4.7e-06 54.3 47 53.2
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 4.7e-06 54.3 46 54.3
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 4.7e-06 54.3 53 52.8
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 6.2e-06 53.9 53 50.9
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 6.2e-06 53.9 65 46.2
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 6.2e-06 53.9 46 56.5
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 6.2e-06 53.9 53 50.9
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 6.2e-06 53.9 53 50.9
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 6.2e-06 53.9 53 50.9
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 6.2e-06 53.9 53 50.9
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 6.2e-06 53.9 53 50.9
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 6.2e-06 53.9 53 50.9
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 6.2e-06 53.9 53 50.9
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 6.2e-06 53.9 57 52.6
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 8.1e-06 53.5 43 55.8
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 8.1e-06 53.5 43 51.2
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 8.1e-06 53.5 53 49.1


User provided reference genes

Program Settings