Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g27760 Chara braunii HOM05D004356 ORTHO05D005542 8.4e-283 976.5 538 100.0
Ah.05g170540 Amaranthus hybridus HOM05D004356 ORTHO05D005542 1.5e-133 480.7 334 67.7
Hund16880 Selenicereus undatus HOM05D004356 ORTHO05D005542 4.2e-133 479.2 333 67.6
AUR62027839 Chenopodium quinoa HOM05D004356 ORTHO05D005542 3.6e-132 476.1 334 66.2
Ca_19032_v3 Cicer arietinum L. HOM05D004356 ORTHO05D005542 4.7e-132 475.7 333 66.4
Cc10_g15470 Coffea canephora HOM05D004356 ORTHO05D005542 8.0e-132 474.9 334 65.6
Cc10_g15440 Coffea canephora HOM05D004356 ORTHO05D005542 6.8e-131 471.9 334 65.3
PSO675G5075 Papaver somniferum HOM05D004356 ORTHO05D005542 8.8e-131 471.5 335 66.0
PSO675G0521 Papaver somniferum HOM05D004356 ORTHO05D005542 1.2e-130 471.1 333 66.4
Nitab4.5_0004523g0040 Nicotiana tabacum HOM05D004356 ORTHO05D005542 1.5e-130 470.7 330 65.8
GSVIVG01009120001 Vitis vinifera HOM05D004356 ORTHO05D005542 1.5e-130 470.7 335 64.5
CANSAT21G1617 Cannabis sativa HOM05D004356 ORTHO05D005542 3.4e-130 469.5 335 65.4
Mapoly0044s0034 Marchantia polymorpha HOM05D004356 ORTHO05D005542 5.7e-130 468.8 334 66.2
MSTRG.16368 Avicennia marina HOM05D004356 ORTHO05D005542 9.8e-130 468.0 339 64.9
Cc07_g18320 Coffea canephora HOM05D004356 ORTHO05D005542 9.8e-130 468.0 334 64.7
PSO017G1942 Papaver somniferum HOM05D004356 ORTHO05D005542 9.8e-130 468.0 333 66.4
Phvul.008G178500 Phaseolus vulgaris HOM05D004356 ORTHO05D005542 9.8e-130 468.0 333 65.8
Psat2g068800 Pisum sativum HOM05D004356 ORTHO05D005542 1.3e-129 467.6 333 64.3
Aqoxy3G00172 Aquilegia oxysepala HOM05D004356 ORTHO05D005542 1.7e-129 467.2 320 67.5
CSS0046210 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 1.7e-129 467.2 335 65.1
Sed0016629 Sechium edule HOM05D004356 ORTHO05D005542 1.7e-129 467.2 334 65.0
TWI56G1415 Tripterygium wilfordii HOM05D004356 ORTHO05D005542 2.2e-129 466.8 335 64.2
unitig_37.g12048 Utricularia gibba HOM05D004356 ORTHO05D005542 2.8e-129 466.5 332 64.8
Os09g0467100 Oryza sativa ssp. japonica HOM05D004356 ORTHO05D005542 3.7e-129 466.1 320 66.9
VMungo0647G1889 Vigna mungo HOM05D004356 ORTHO05D005542 3.7e-129 466.1 333 65.2
Oeu025262.1 Olea europaea HOM05D004356 ORTHO05D005542 4.8e-129 465.7 333 64.3
TAR381G1323 Trochodendron aralioides HOM05D004356 ORTHO05D005542 4.8e-129 465.7 334 64.4
Nitab4.5_0001788g0020 Nicotiana tabacum HOM05D004356 ORTHO05D005542 6.3e-129 465.3 339 64.6
PGSC0003DMG400001802 Solanum tuberosum HOM05D004356 ORTHO05D005542 6.3e-129 465.3 339 64.3
COL.COLO4_11966 Corchorus olitorius HOM05D004356 ORTHO05D005542 8.3e-129 464.9 340 64.1
Dinv42649 Davidia involucrata HOM05D004356 ORTHO05D005542 8.3e-129 464.9 334 65.0
Medtr5g065270 Medicago truncatula HOM05D004356 ORTHO05D005542 1.1e-128 464.5 333 64.3
Sopen01g032880 Solanum pennellii HOM05D004356 ORTHO05D005542 1.1e-128 464.5 339 64.0
Glyma.14G178900 Glycine max HOM05D004356 ORTHO05D005542 1.4e-128 464.2 334 64.7
Solyc01g081300.4 Solanum lycopersicum HOM05D004356 ORTHO05D005542 1.8e-128 463.8 339 64.0
CDE04G0095 Ceratophyllum demersum HOM05D004356 ORTHO05D005542 3.1e-128 463.0 333 65.5
FAN04G0906 Fragaria x ananassa HOM05D004356 ORTHO05D005542 3.1e-128 463.0 340 64.1
Glyma.02G211300 Glycine max HOM05D004356 ORTHO05D005542 3.1e-128 463.0 321 66.0
SalBow8G3481 Salvia bowleyana HOM05D004356 ORTHO05D005542 3.1e-128 463.0 336 64.0
TPR.G16206 Trifolium pratense HOM05D004356 ORTHO05D005542 3.1e-128 463.0 333 64.3
EL10Ac9g21432 Beta vulgaris HOM05D000128 ORTHO05D005542 4.1e-128 462.6 347 63.7
Duzib093G1902 Durio zibethinus HOM05D004356 ORTHO05D005542 4.1e-128 462.6 340 64.1
Aqoxy1G00182 Aquilegia oxysepala HOM05D004356 ORTHO05D005542 5.4e-128 462.2 339 64.9
SGA_v2.0_scaffold175G39331 Striga asiatica HOM05D004356 ORTHO05D005542 5.4e-128 462.2 339 64.0
RcHm_v2.0_Chr1g0327751 Rosa chinensis HOM05D004356 ORTHO05D005542 9.1e-128 461.5 332 64.8
ECA247G0627 Erigeron canadensis HOM05D004356 ORTHO05D005542 1.2e-127 461.1 334 63.5
SEGI_03509 Sequoiadendron giganteum HOM05D004356 ORTHO05D005542 1.2e-127 461.1 336 66.1
arahy.Tifrunner.gnm1.ann1.JC6ZCB Arachis hypogaea HOM05D004356 ORTHO05D005542 1.6e-127 460.7 319 66.5
arahy.Tifrunner.gnm1.ann1.VLAW7V Arachis hypogaea HOM05D004356 ORTHO05D005542 1.6e-127 460.7 319 66.1
FAN18G3440 Fragaria x ananassa HOM05D004356 ORTHO05D005542 2.0e-127 460.3 340 63.8
Pp3c23_9790 Physcomitrium patens HOM05D004356 ORTHO05D005542 2.0e-127 460.3 332 65.4
AagrBONN_evm.TU.Sc2ySwM_344.5470 Anthoceros agrestis HOM05D004356 ORTHO05D005542 2.7e-127 459.9 333 65.2
FvH4_5g36000 Fragaria vesca HOM05D004356 ORTHO05D005542 2.7e-127 459.9 340 63.8
Peaxi162Scf00592g00454 Petunia axillaris HOM05D004356 ORTHO05D005542 2.7e-127 459.9 366 60.4
HanXRQChr02g0040341 Helianthus annuus HOM05D004356 ORTHO05D005542 3.5e-127 459.5 335 62.7
Migut.M02007 Erythranthe guttata HOM05D004356 ORTHO05D005542 4.5e-127 459.1 332 64.8
Gohir.A05G222100 Gossypium hirsutum HOM05D004356 ORTHO05D005542 4.5e-127 459.1 340 62.9
arahy.Tifrunner.gnm1.ann1.QY7301 Arachis hypogaea HOM05D004356 ORTHO05D005542 7.7e-127 458.4 319 66.1
Actinidia33114 Actinidia chinensis HOM05D004356 ORTHO05D005542 1.3e-126 457.6 335 63.6
Lalb_Chr10g0102631 Lupinus albus HOM05D004356 ORTHO05D005542 1.3e-126 457.6 327 64.5
TPR.G30120 Trifolium pratense HOM05D004356 ORTHO05D005542 1.3e-126 457.6 333 64.0
CAN.G992.8 Capsicum annuum HOM05D004356 ORTHO05D005542 1.7e-126 457.2 330 64.5
Gohir.D05G224800 Gossypium hirsutum HOM05D004356 ORTHO05D005542 1.7e-126 457.2 340 62.6
QL09p016893 Quercus lobata HOM05D004356 ORTHO05D005542 1.7e-126 457.2 335 63.0
Rhsim07G0209000 Rhododendron simsii HOM05D004356 ORTHO05D005542 2.2e-126 456.8 357 61.1
MELO3C011060.2 Cucumis melo HOM05D004356 ORTHO05D005542 2.9e-126 456.4 334 63.5
CsaV3_2G030020 Cucumis sativus L. HOM05D004356 ORTHO05D005542 3.8e-126 456.1 334 63.5
Gorai.009G232200 Gossypium raimondii HOM05D004356 ORTHO05D005542 3.8e-126 456.1 340 62.4
Zm00001eb284720 Zea mays HOM05D004356 ORTHO05D005542 3.8e-126 456.1 320 65.3
RcHm_v2.0_Chr7g0237731 Rosa chinensis HOM05D004356 ORTHO05D005542 5.0e-126 455.7 339 63.4
MD00G1136500 Malus domestica HOM05D004356 ORTHO05D005542 6.5e-126 455.3 334 62.9
vmacro04684 Vaccinium macrocarpon HOM05D004356 ORTHO05D005542 6.5e-126 455.3 359 60.2
Atru.chr13.1064 Acer truncatum HOM05D004356 ORTHO05D005542 1.1e-125 454.5 335 62.7
Atru.chr13.1070 Acer truncatum HOM05D004356 ORTHO05D005542 1.1e-125 454.5 335 62.7
Ciclev10001304m.g Citrus clementina HOM05D004356 ORTHO05D005542 1.9e-125 453.8 340 62.6
Lsat_1_v5_gn_1_2520 Lactuca sativa HOM05D004356 ORTHO05D005542 4.2e-125 452.6 335 63.0
MD15G1379800 Malus domestica HOM05D004356 ORTHO05D005542 5.5e-125 452.2 332 63.0
Manes.18G062300 Manihot esculenta HOM05D004356 ORTHO05D005542 1.2e-124 451.1 321 66.4
THA.LOC104816870 Tarenaya hassleriana HOM05D004356 ORTHO05D005542 1.2e-124 451.1 338 63.3
PGR102G1623 Punica granatum HOM05D004356 ORTHO05D005542 1.6e-124 450.7 333 63.4
Lj1g0019049 Lotus japonicus HOM05D004356 ORTHO05D005542 1.8e-123 447.2 334 62.9
AT3G21110 Arabidopsis thaliana HOM05D004356 ORTHO05D005542 5.2e-123 445.7 339 63.4
FAN08G0112 Fragaria x ananassa HOM05D004356 ORTHO05D005542 5.2e-123 445.7 367 59.1
CSS0005507 Camellia sinensis var. sinensis HOM05D004356 ORTHO05D005542 6.8e-123 445.3 330 63.9
CiPaw.16G056200 Carya illinoinensis HOM05D004356 ORTHO05D005542 6.8e-123 445.3 334 61.1
HPP92_011797 Vanilla planifolia HOM05D004356 ORTHO05D005542 6.8e-123 445.3 320 62.8
Thhalv10020825m.g Eutrema salsugineum HOM05D004356 ORTHO05D005542 1.2e-122 444.5 339 62.8
SMO340G0097 Selaginella moellendorffii HOM05D004356 ORTHO05D005542 1.2e-122 444.5 327 65.7
Eucgr.F00397 Eucalyptus grandis HOM05D004356 ORTHO05D005542 2.6e-122 443.4 350 60.6
AL3G35050 Arabidopsis lyrata HOM05D004356 ORTHO05D005542 3.4e-122 443.0 339 63.4
Lj1g0006758 Lotus japonicus HOM05D004356 ORTHO05D005542 3.4e-122 443.0 334 62.3
CARHR096940 Cardamine hirsuta HOM05D004356 ORTHO05D005542 4.4e-122 442.6 339 62.5
A01p33740 Brassica napus HOM05D004356 ORTHO05D005542 5.7e-122 442.2 339 62.8
Carub.0003s2101 Capsella rubella HOM05D004356 ORTHO05D005542 1.3e-121 441.0 338 63.0
A03p42020 Brassica napus HOM05D004356 ORTHO05D005542 3.7e-121 439.5 340 62.4
Carub.0003s2106 Capsella rubella HOM05D004356 ORTHO05D005542 6.3e-121 438.7 339 62.2
ATR0022G038 Amborella trichopoda HOM05D004356 ORTHO05D005542 1.8e-120 437.2 335 60.3
BolC3t17429H Brassica oleracea HOM05D004356 ORTHO05D005542 1.8e-120 437.2 340 62.1
AUR62018997 Chenopodium quinoa HOM05D004356 ORTHO05D005542 1.8e-120 437.2 297 67.7
Haze_22357 Corylus avellana HOM05D004356 ORTHO05D005542 1.8e-120 437.2 372 56.5
BraA03t13356Z Brassica rapa HOM05D004356 ORTHO05D005542 4.1e-120 436.0 343 62.1
BraA01t03487Z Brassica rapa HOM05D004356 ORTHO05D005542 9.1e-120 434.9 343 62.1
Thecc.08G065800 Theobroma cacao HOM05D004356 ORTHO05D005542 1.6e-119 434.1 297 66.7
BcaB04g19136 Brassica carinata HOM05D004356 ORTHO05D005542 2.7e-119 433.3 339 61.1
Aa31LG8G7830 Aethionema arabicum HOM05D004356 ORTHO05D005542 7.7e-119 431.8 342 60.5
Dinv44826 Davidia involucrata HOM05D004356 ORTHO05D005542 8.6e-118 428.3 299 65.2
Cre03.g202113 Chlamydomonas reinhardtii HOM05D004356 ORTHO05D005542 8.0e-116 421.8 333 57.7
BcaC01g03528 Brassica carinata HOM05D004356 ORTHO05D004900 1.0e-115 421.4 316 63.3
BcaB04g20611 Brassica carinata HOM05D004356 ORTHO05D005542 1.4e-115 421.0 339 60.8
Duzib106G0787 Durio zibethinus HOM05D004356 ORTHO05D005542 1.8e-115 420.6 340 59.7
Potri.017G051500 Populus trichocarpa HOM05D004356 ORTHO05D005542 1.5e-114 417.5 297 65.3
Sabra17G0038400 Salix brachista HOM05D004356 ORTHO05D005542 2.0e-114 417.2 342 60.2
Sabra17G0043000 Salix brachista HOM05D004356 ORTHO05D005542 2.0e-114 417.2 342 60.2
arahy.Tifrunner.gnm1.ann1.1YQ32R Arachis hypogaea HOM05D004356 ORTHO05D005542 4.4e-114 416.0 325 60.6
MCO12G379 Micromonas commoda HOM05D004356 ORTHO05D005542 4.4e-114 416.0 322 61.5
Prupe.1G526100 Prunus persica HOM05D004356 ORTHO05D005542 4.4e-114 416.0 283 67.1
Sabra17G0037700 Salix brachista HOM05D004356 ORTHO05D005542 4.4e-114 416.0 342 59.9
Carub.0043s0008 Capsella rubella HOM05D004356 ORTHO05D005542 1.3e-113 414.5 298 64.4
Cfa013712 Carpinus fangiana HOM05D004356 ORTHO05D005542 2.2e-113 413.7 334 59.9
C03p51440 Brassica napus HOM05D004356 ORTHO05D005542 1.4e-112 411.0 343 58.9
arahy.Tifrunner.gnm1.ann1.3Z7WCZ Arachis hypogaea HOM05D004356 ORTHO05D005542 1.8e-112 410.6 319 61.1
PRCOL_00002575 Prasinoderma coloniale HOM05D004356 ORTHO05D005542 7.0e-112 408.7 279 68.5
C01p43120 Brassica napus HOM05D004356 ORTHO05D005542 1.2e-111 407.9 301 64.1
BolC1t04259H Brassica oleracea HOM05D004356 ORTHO05D005542 1.2e-111 407.9 301 64.1
Sp3g19060 Schrenkiella parvula HOM05D004356 ORTHO05D005542 1.5e-109 401.0 339 58.4
arahy.Tifrunner.gnm1.ann1.L8UQBM Arachis hypogaea HOM05D004356 ORTHO05D005542 4.3e-109 399.4 278 65.1
Carub.0043s0006 Capsella rubella HOM05D004356 ORTHO05D005542 4.1e-104 382.9 336 56.8
Sc23g0000510 Simmondsia chinensis HOM05D004356 ORTHO05D005542 5.6e-101 372.5 259 68.0
Carub.0043s0010 Capsella rubella HOM05D004356 ORTHO05D005542 2.0e-98 364.0 320 55.9
SHI20358 Sapria himalayana HOM05D004356 ORTHO05D005542 1.9e-96 357.5 306 56.5
Lj4C732G13 Lonicera japonica HOM05D004356 ORTHO05D005542 1.1e-93 348.2 372 49.5
Cpa.g.sc198.38 Carica papaya HOM05D004356 ORTHO05D005542 5.1e-86 322.8 262 58.8
Gohir.A05G222001 Gossypium hirsutum HOM05D004356 ORTHO05D005542 1.9e-80 304.3 269 55.8
CiPaw.16G030800 Carya illinoinensis HOM05D004356 ORTHO05D005542 6.4e-73 279.3 264 51.5
Actinidia29604 Actinidia chinensis HOM05D004356 ORTHO05D005542 2.1e-71 274.2 188 67.6
ClCG00G002050 Citrullus lanatus HOM05D004356 ORTHO05D005542 1.9e-64 251.1 176 67.0
Nn1g08498 Nelumbo nucifera HOM05D004356 ORTHO05D005542 4.2e-64 250.0 183 63.9
arahy.Tifrunner.gnm1.ann1.PGQR8U Arachis hypogaea HOM05D004356 ORTHO05D005542 2.7e-63 247.3 281 48.0
RcHm_v2.0_Chr3g0491851 Rosa chinensis HOM05D004356 ORTHO05D005542 1.8e-54 218.0 273 43.6
Carub.0516s0001 Capsella rubella HOM05D004356 ORTHO05D005542 2.5e-53 214.2 142 68.3
Nn1g08495 Nelumbo nucifera HOM05D004356 ORTHO05D005542 7.4e-53 212.6 157 61.1
ClCG08G011430 Citrullus lanatus HOM05D004356 ORTHO05D005542 6.3e-52 209.5 159 59.7
arahy.Tifrunner.gnm1.ann1.X0GHYT Arachis hypogaea HOM05D004356 ORTHO05D005542 3.5e-47 193.7 246 44.7
DCAR_012871 Daucus carota HOM05D004356 ORTHO05D005542 9.0e-43 179.1 296 36.8
arahy.Tifrunner.gnm1.ann1.HK5GW2 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.5e-37 161.8 204 45.6
Psat0s4321g0120 Pisum sativum HOM05D004356 ORTHO05D005542 2.5e-37 161.0 116 64.7
arahy.Tifrunner.gnm1.ann1.6VP8YS Arachis hypogaea HOM05D004356 ORTHO05D005542 5.0e-33 146.7 122 60.7
arahy.Tifrunner.gnm1.ann1.F3AJY4 Arachis hypogaea HOM05D004356 ORTHO05D005542 1.4e-32 145.2 100 66.0
arahy.Tifrunner.gnm1.ann1.D1TUAT Arachis hypogaea HOM05D004356 ORTHO05D005542 7.2e-32 142.9 130 53.8
arahy.Tifrunner.gnm1.ann1.F88CCI Arachis hypogaea HOM05D004356 ORTHO05D005542 7.2e-32 142.9 268 34.3
arahy.Tifrunner.gnm1.ann1.FASD2W Arachis hypogaea HOM05D004356 ORTHO05D005542 2.0e-29 134.8 100 64.0
arahy.Tifrunner.gnm1.ann1.MUPT6T Arachis hypogaea HOM05D004356 ORTHO05D005542 2.0e-29 134.8 100 64.0
arahy.Tifrunner.gnm1.ann1.H4UIY2 Arachis hypogaea HOM05D004356 ORTHO05D005542 4.5e-26 123.6 159 44.7
arahy.Tifrunner.gnm1.ann1.JXGW17 Arachis hypogaea HOM05D004356 ORTHO05D005542 4.5e-26 123.6 159 44.7
EL10As8g23848 Beta vulgaris HOM05D004356 ORTHO05D090264 2.9e-25 120.9 226 35.0
Cfa024383 Carpinus fangiana HOM05D004356 ORTHO05D124745 3.0e-22 110.9 168 38.1
Zm00001eb297900 Zea mays HOM05D004356 ORTHO05D005542 2.5e-16 91.3 51 68.6
Zm00001eb297960 Zea mays HOM05D004356 ORTHO05D444542 2.5e-16 91.3 51 68.6
arahy.Tifrunner.gnm1.ann1.8IDC4C Arachis hypogaea HOM05D004356 ORTHO05D005542 1.7e-09 68.6 51 62.7


User provided reference genes

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