Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 1.4e-202 709.5 381 100.0
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 5.2e-61 239.2 187 59.4
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 8.9e-61 238.4 181 61.3
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 5.8e-60 235.7 185 60.0
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 9.8e-60 235.0 202 55.4
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 3.7e-59 233.0 185 61.1
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 4.9e-59 232.6 198 56.1
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 4.9e-59 232.6 185 60.5
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 6.4e-59 232.3 183 58.5
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 8.3e-59 231.9 185 60.5
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 8.3e-59 231.9 184 59.2
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 8.3e-59 231.9 183 60.1
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 1.4e-58 231.1 183 60.7
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.9e-58 230.7 188 58.0
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.9e-58 230.7 188 58.0
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 2.4e-58 230.3 185 58.9
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.4e-58 230.3 184 59.8
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 4.1e-58 229.6 185 58.4
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 4.1e-58 229.6 185 58.4
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 4.1e-58 229.6 194 57.2
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 5.4e-58 229.2 184 59.8
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 7.1e-58 228.8 186 59.7
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 7.1e-58 228.8 323 43.3
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 7.1e-58 228.8 177 61.6
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 9.2e-58 228.4 197 54.8
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 1.2e-57 228.0 198 54.5
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 1.2e-57 228.0 180 60.0
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.2e-57 228.0 183 60.1
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 1.2e-57 228.0 183 60.1
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 1.6e-57 227.6 185 58.9
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 1.6e-57 227.6 183 59.0
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 2.1e-57 227.3 185 61.6
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 2.7e-57 226.9 183 59.0
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 2.7e-57 226.9 178 60.7
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 3.5e-57 226.5 185 60.0
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 3.5e-57 226.5 183 59.0
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 4.6e-57 226.1 183 60.1
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 6.0e-57 225.7 205 58.0
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 7.8e-57 225.3 182 58.8
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 7.8e-57 225.3 179 61.5
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 7.8e-57 225.3 195 56.4
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 1.0e-56 224.9 185 58.9
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 1.0e-56 224.9 177 59.3
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 1.3e-56 224.6 183 60.7
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 1.3e-56 224.6 180 61.1
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 1.3e-56 224.6 182 58.8
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 1.3e-56 224.6 195 55.9
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.3e-56 224.6 185 55.7
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 1.3e-56 224.6 185 57.3
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 1.3e-56 224.6 184 58.2
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.3e-56 224.6 194 55.7
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 1.7e-56 224.2 185 57.8
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 1.7e-56 224.2 182 58.8
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 1.7e-56 224.2 202 54.5
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 1.7e-56 224.2 187 58.8
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 3.0e-56 223.4 175 60.6
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 3.9e-56 223.0 182 58.2
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 3.9e-56 223.0 182 57.7
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 5.1e-56 222.6 186 54.8
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 5.1e-56 222.6 195 56.9
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 5.1e-56 222.6 189 56.6
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 6.6e-56 222.2 180 58.9
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 8.6e-56 221.9 183 58.5
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 8.6e-56 221.9 177 61.0
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 8.6e-56 221.9 193 56.0
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 1.1e-55 221.5 186 55.9
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.1e-55 221.5 177 59.3
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 1.1e-55 221.5 182 58.8
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 1.5e-55 221.1 185 58.4
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 1.9e-55 220.7 180 62.8
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 2.5e-55 220.3 174 61.5
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 2.5e-55 220.3 185 57.8
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 2.5e-55 220.3 182 58.8
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 3.3e-55 219.9 177 59.9
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 3.3e-55 219.9 180 59.4
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 4.3e-55 219.5 180 59.4
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 4.3e-55 219.5 185 57.3
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 7.3e-55 218.8 186 54.8
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 9.5e-55 218.4 178 58.4
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 9.5e-55 218.4 232 48.7
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 4.7e-54 216.1 177 59.3
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 1.1e-53 214.9 180 56.7
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 1.1e-53 214.9 177 57.6
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.3e-53 213.8 203 54.7
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 3.1e-53 213.4 180 57.8
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 4.0e-53 213.0 192 56.2
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 4.0e-53 213.0 183 54.6
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 8.9e-53 211.8 229 49.3
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 2.6e-52 210.3 182 56.0
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.6e-52 210.3 222 50.9
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 2.4e-50 203.8 250 44.4
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 2.4e-50 203.8 160 60.0
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 1.1e-47 194.9 159 59.7
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 6.8e-45 185.7 248 42.7
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 7.6e-44 182.2 180 50.6
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 9.9e-44 181.8 163 52.1
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 3.8e-43 179.9 184 48.9
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 1.3e-38 164.9 193 46.1
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 6.2e-38 162.5 185 43.8
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 1.4e-37 161.4 351 31.3
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 2.0e-36 157.5 138 56.5
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 5.8e-36 156.0 200 40.5
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 9.9e-36 155.2 146 50.7
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 6.4e-35 152.5 167 44.9
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 1.9e-26 124.4 114 54.4
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 4.2e-26 123.2 125 50.4
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 3.5e-25 120.2 135 49.6
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 3.5e-25 120.2 135 49.6
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 3.0e-24 117.1 112 51.8
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 8.7e-24 115.5 109 52.3
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 3.2e-18 97.1 142 40.1
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 2.7e-17 94.0 86 55.8
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 3.0e-16 90.5 146 39.7
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 8.7e-16 89.0 146 39.7
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 6.9e-13 79.3 78 50.0
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 3.5e-09 67.0 98 38.8
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 1.6e-06 58.2 66 48.5
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 6.3e-06 56.2 49 53.1
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 8.2e-06 55.8 57 47.4


User provided reference genes

Program Settings