Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g26318 Chara braunii HOM05D002335 ORTHO05D006282 1.1e-134 483.4 252 100.0
Mapoly0011s0025 Marchantia polymorpha HOM05D002335 ORTHO05D006282 3.2e-30 136.3 217 39.6
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 4.3e-27 125.9 219 36.1
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 9.5e-27 124.8 218 36.2
Pp3c22_13730 Physcomitrium patens HOM05D002335 ORTHO05D006282 4.7e-26 122.5 228 37.3
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.0e-25 121.3 217 36.4
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 1.0e-25 121.3 217 36.4
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 1.8e-25 120.6 217 34.1
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 1.8e-25 120.6 217 34.1
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 1.8e-25 120.6 217 34.1
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 1.8e-25 120.6 218 35.8
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 2.3e-25 120.2 234 35.5
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 2.3e-25 120.2 231 34.2
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 4.0e-25 119.4 221 33.9
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 4.0e-25 119.4 218 34.4
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 5.2e-25 119.0 222 33.3
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 6.8e-25 118.6 235 33.6
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 6.8e-25 118.6 217 35.9
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 8.9e-25 118.2 222 35.6
SMO358G0254 Selaginella moellendorffii HOM05D002335 ORTHO05D006282 8.9e-25 118.2 204 38.7
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 8.9e-25 118.2 217 35.9
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 8.9e-25 118.2 224 35.3
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 1.2e-24 117.9 217 35.0
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 2.6e-24 116.7 217 33.6
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 2.6e-24 116.7 233 34.3
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 3.4e-24 116.3 218 35.3
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 3.4e-24 116.3 231 34.6
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 3.4e-24 116.3 217 33.2
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 5.8e-24 115.5 216 33.8
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 7.5e-24 115.2 215 33.5
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 7.5e-24 115.2 231 32.9
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 7.5e-24 115.2 222 35.1
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 9.8e-24 114.8 235 34.0
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 1.3e-23 114.4 223 33.2
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 1.3e-23 114.4 232 32.8
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 1.3e-23 114.4 232 33.2
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 1.7e-23 114.0 225 34.2
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 1.7e-23 114.0 226 31.9
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 2.2e-23 113.6 224 33.9
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 3.7e-23 112.8 216 32.4
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 3.7e-23 112.8 222 32.4
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 3.7e-23 112.8 225 34.2
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 3.7e-23 112.8 223 32.7
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 6.4e-23 112.1 221 32.6
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 8.3e-23 111.7 220 33.2
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 8.3e-23 111.7 217 33.6
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 1.9e-22 110.5 218 33.9
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 1.9e-22 110.5 222 32.9
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 1.9e-22 110.5 221 33.5
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 1.9e-22 110.5 224 32.6
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 2.4e-22 110.2 228 31.6
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 2.4e-22 110.2 244 33.2
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 3.2e-22 109.8 217 32.7
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 3.2e-22 109.8 233 33.0
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 4.1e-22 109.4 229 31.4
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 5.4e-22 109.0 230 33.9
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 7.0e-22 108.6 217 34.6
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 1.2e-21 107.8 220 33.2
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 1.6e-21 107.5 209 32.1
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 2.0e-21 107.1 217 32.7
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 2.0e-21 107.1 229 31.4
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 2.7e-21 106.7 223 30.9
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 3.5e-21 106.3 219 32.4
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 3.5e-21 106.3 218 33.5
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 3.5e-21 106.3 218 33.5
Pp3c2_6470 Physcomitrium patens HOM05D002335 ORTHO05D006282 3.5e-21 106.3 217 34.1
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 4.6e-21 105.9 234 30.8
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 6.0e-21 105.5 224 33.0
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 1.0e-20 104.8 224 33.0
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 1.0e-20 104.8 197 34.5
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 1.0e-20 104.8 231 32.0
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 1.3e-20 104.4 231 31.6
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 3.9e-20 102.8 240 30.8
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 3.9e-20 102.8 231 31.6
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 3.9e-20 102.8 219 33.3
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 5.0e-20 102.4 181 36.5
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 6.6e-20 102.1 185 36.2
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 6.6e-20 102.1 218 32.1
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 8.6e-20 101.7 220 31.8
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 8.6e-20 101.7 219 32.4
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 1.1e-19 101.3 235 32.3
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 1.1e-19 101.3 226 29.6
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.5e-19 100.9 191 36.1
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 1.5e-19 100.9 224 34.4
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 1.9e-19 100.5 233 31.8
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 1.9e-19 100.5 155 37.4
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 2.5e-19 100.1 170 32.9
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 3.3e-19 99.8 219 31.5
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 3.3e-19 99.8 226 29.2
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 4.3e-19 99.4 198 33.3
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 4.3e-19 99.4 198 33.3
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 4.3e-19 99.4 225 31.6
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 7.3e-19 98.6 155 36.8
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 9.5e-19 98.2 218 31.7
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 9.5e-19 98.2 218 31.7
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 9.5e-19 98.2 218 31.7
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 9.5e-19 98.2 155 36.8
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 1.6e-18 97.4 224 31.2
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 2.1e-18 97.1 153 37.3
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 2.1e-18 97.1 224 31.2
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 2.8e-18 96.7 220 32.7
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 2.8e-18 96.7 220 32.3
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 2.8e-18 96.7 146 38.4
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 2.8e-18 96.7 230 31.7
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 4.7e-18 95.9 221 33.0
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 6.2e-18 95.5 188 32.4
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 1.1e-17 94.7 224 31.2
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 1.1e-17 94.7 196 33.2
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 1.4e-17 94.4 221 33.0
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 2.3e-17 93.6 183 32.8
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 3.1e-17 93.2 146 37.0
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 5.2e-17 92.4 187 32.1
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 5.8e-16 89.0 223 30.5
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 5.4e-14 82.4 213 30.0
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 2.7e-13 80.1 218 28.4
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 4.6e-13 79.3 148 30.4
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 7.8e-13 78.6 260 30.0
AagrBONN_evm.TU.Sc2ySwM_344.5493 Anthoceros agrestis HOM05D002335 ORTHO05D006282 1.7e-12 77.4 186 33.9
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 3.9e-12 76.3 196 30.1
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 5.1e-12 75.9 121 40.5
Lalb_Chr23g0276381 Lupinus albus HOM05D002335 ORTHO05D006282 1.2e-10 71.2 134 35.8
Lalb_Chr07g0181181 Lupinus albus HOM05D002335 ORTHO05D006282 8.9e-09 65.1 154 32.5
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 3.4e-08 63.2 194 27.8
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 9.9e-08 61.6 159 30.8


User provided reference genes

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