Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 2.6e-279 964.9 549 100.0
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 9.6e-32 142.5 138 50.7
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 3.6e-31 140.6 154 48.7
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 1.4e-30 138.7 148 49.3
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 6.9e-30 136.3 136 53.7
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 1.5e-29 135.2 152 47.4
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 2.6e-29 134.4 136 52.2
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 5.8e-29 133.3 148 47.3
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 7.6e-29 132.9 183 44.3
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 9.9e-29 132.5 210 41.4
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 9.9e-29 132.5 210 41.4
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 1.3e-28 132.1 153 49.0
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 2.2e-28 131.3 167 44.9
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 2.9e-28 131.0 136 48.5
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 2.9e-28 131.0 144 45.8
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 3.8e-28 130.6 136 49.3
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 3.8e-28 130.6 144 48.6
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 4.9e-28 130.2 145 48.3
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 6.4e-28 129.8 166 43.4
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 6.4e-28 129.8 136 47.1
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 8.4e-28 129.4 144 46.5
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 8.4e-28 129.4 136 50.7
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.4e-27 128.6 164 43.9
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 1.9e-27 128.3 236 36.0
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 1.9e-27 128.3 136 48.5
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 2.4e-27 127.9 160 47.5
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 2.4e-27 127.9 145 46.9
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 4.2e-27 127.1 136 47.8
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 4.2e-27 127.1 136 47.8
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 4.2e-27 127.1 155 45.2
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 5.4e-27 126.7 136 47.8
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 5.4e-27 126.7 136 46.3
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 7.1e-27 126.3 176 43.2
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 1.2e-26 125.6 136 46.3
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 1.2e-26 125.6 136 49.3
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.2e-26 125.6 136 47.1
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 1.6e-26 125.2 136 45.6
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 1.6e-26 125.2 131 50.4
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 1.6e-26 125.2 212 36.3
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.1e-26 124.8 229 34.5
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 2.1e-26 124.8 136 46.3
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 2.7e-26 124.4 138 48.6
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 2.7e-26 124.4 136 47.8
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 2.7e-26 124.4 149 47.0
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 3.5e-26 124.0 136 46.3
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 3.5e-26 124.0 144 54.2
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 4.6e-26 123.6 136 44.9
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 4.6e-26 123.6 136 44.9
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 4.6e-26 123.6 145 46.9
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 4.6e-26 123.6 229 34.1
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 4.6e-26 123.6 136 45.6
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 6.0e-26 123.2 136 47.8
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 6.0e-26 123.2 138 45.7
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 7.9e-26 122.9 154 42.2
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 1.0e-25 122.5 144 52.1
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 1.0e-25 122.5 136 47.8
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 1.3e-25 122.1 131 46.6
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 1.7e-25 121.7 145 45.5
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 1.7e-25 121.7 145 45.5
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 1.7e-25 121.7 136 44.9
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 2.3e-25 121.3 137 46.7
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 2.3e-25 121.3 153 47.7
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 3.0e-25 120.9 147 45.6
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 3.9e-25 120.6 138 47.1
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 3.9e-25 120.6 136 47.1
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 5.1e-25 120.2 137 46.7
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 5.1e-25 120.2 145 44.8
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 5.1e-25 120.2 136 44.9
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 5.1e-25 120.2 136 47.1
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 8.7e-25 119.4 144 47.9
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 1.1e-24 119.0 145 44.8
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 1.9e-24 118.2 137 43.1
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 2.5e-24 117.9 141 48.9
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 7.3e-24 116.3 139 41.7
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 7.3e-24 116.3 139 51.1
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 7.3e-24 116.3 139 42.4
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 1.3e-23 115.5 159 40.3
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.8e-23 114.4 90 55.6
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 2.8e-23 114.4 139 41.7
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 3.6e-23 114.0 137 45.3
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 8.1e-23 112.8 147 40.1
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 8.1e-23 112.8 75 62.7
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 1.1e-22 112.5 136 43.4
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 2.4e-22 111.3 136 42.6
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 2.4e-22 111.3 137 42.3
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 4.0e-22 110.5 73 60.3
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 5.3e-22 110.2 75 61.3
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 9.0e-22 109.4 134 42.5
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 9.0e-22 109.4 136 41.9
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 1.5e-21 108.6 136 41.9
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 2.0e-21 108.2 136 41.2
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 3.4e-21 107.5 156 37.8
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 4.5e-21 107.1 137 40.1
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 4.5e-21 107.1 136 41.2
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 4.5e-21 107.1 136 41.2
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 4.5e-21 107.1 136 41.2
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 4.5e-21 107.1 136 41.2
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 4.5e-21 107.1 136 41.2
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 9.9e-21 105.9 136 47.1
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 9.9e-21 105.9 136 41.2
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 1.7e-20 105.1 156 42.3
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 2.2e-20 104.8 229 31.0
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 6.4e-20 103.2 145 44.1
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.4e-19 102.1 177 35.0
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 1.4e-19 102.1 136 40.4
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 5.5e-19 100.1 136 40.4
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 4.6e-18 97.1 73 57.5
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 1.3e-17 95.5 148 39.2
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 3.9e-17 94.0 145 39.3
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 6.7e-17 93.2 71 56.3
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 8.7e-17 92.8 136 36.8
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 2.5e-16 91.3 136 39.0
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 3.7e-15 87.4 109 42.2
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 6.2e-15 86.7 55 63.6
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 6.2e-15 86.7 109 42.2
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 9.0e-14 82.8 160 34.4
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 3.4e-13 80.9 110 45.5
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 1.3e-12 79.0 105 42.9
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 7.1e-11 73.2 156 30.8


User provided reference genes

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