Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 0.0e+00 1528.8 815 100.0
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 3.7e-104 383.6 796 36.7
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 2.9e-101 374.0 727 37.4
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 6.1e-99 366.3 808 35.5
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 1.9e-97 361.3 801 34.3
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 2.8e-96 357.5 801 34.3
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 8.2e-96 355.9 801 34.6
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 1.1e-95 355.5 801 33.7
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 1.8e-95 354.8 796 34.7
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 2.0e-94 351.3 805 34.9
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 3.4e-94 350.5 811 35.6
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 3.4e-94 350.5 805 34.3
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 4.5e-94 350.1 789 34.3
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 5.9e-94 349.7 784 34.4
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 1.0e-93 349.0 812 35.3
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 1.7e-93 348.2 803 34.7
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.7e-93 348.2 805 35.2
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 1.7e-93 348.2 793 34.2
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 2.9e-93 347.4 784 34.7
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 3.8e-93 347.1 788 34.4
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 5.0e-93 346.7 791 35.4
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 5.0e-93 346.7 800 34.2
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 5.0e-93 346.7 798 34.7
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 5.0e-93 346.7 813 34.7
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 5.0e-93 346.7 801 34.8
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 5.0e-93 346.7 776 34.8
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 6.5e-93 346.3 779 35.3
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 8.5e-93 345.9 795 34.8
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 4.2e-92 343.6 784 34.3
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 4.2e-92 343.6 806 33.4
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 4.2e-92 343.6 796 34.4
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 5.5e-92 343.2 797 34.6
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 5.5e-92 343.2 781 34.6
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 7.2e-92 342.8 800 34.0
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 7.2e-92 342.8 786 33.8
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 7.2e-92 342.8 780 34.5
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 7.2e-92 342.8 778 34.3
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 1.6e-91 341.7 802 33.4
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 1.6e-91 341.7 809 33.1
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 2.7e-91 340.9 781 35.2
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 2.7e-91 340.9 796 34.5
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 2.7e-91 340.9 806 33.0
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 3.6e-91 340.5 799 33.8
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 4.6e-91 340.1 798 34.0
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 4.6e-91 340.1 788 34.5
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.0e-90 339.0 795 34.3
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 1.4e-90 338.6 798 33.7
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 1.4e-90 338.6 808 34.0
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 3.9e-90 337.0 798 33.7
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 3.9e-90 337.0 805 33.8
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 3.9e-90 337.0 803 34.0
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 3.9e-90 337.0 801 33.8
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 5.1e-90 336.7 810 33.8
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 5.1e-90 336.7 789 34.2
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 5.1e-90 336.7 804 33.7
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 6.7e-90 336.3 798 33.2
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 6.7e-90 336.3 785 33.9
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 1.1e-89 335.5 787 34.2
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 1.1e-89 335.5 810 33.6
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 2.5e-89 334.3 797 32.1
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 3.3e-89 334.0 786 34.9
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 4.3e-89 333.6 783 34.4
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 4.3e-89 333.6 795 34.0
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 5.7e-89 333.2 798 33.5
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 9.7e-89 332.4 811 34.2
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 9.7e-89 332.4 798 36.6
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 1.3e-88 332.0 793 33.5
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 1.7e-88 331.6 784 33.5
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 2.2e-88 331.3 775 35.7
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 3.7e-88 330.5 800 33.9
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 6.3e-88 329.7 787 34.8
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 8.2e-88 329.3 783 34.1
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 1.1e-87 328.9 820 33.0
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 1.8e-87 328.2 780 33.8
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 1.8e-87 328.2 784 36.5
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 4.1e-87 327.0 785 34.6
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 6.9e-87 326.2 815 32.3
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.6e-86 324.3 795 34.2
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 2.6e-86 324.3 820 33.8
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 3.4e-86 323.9 804 33.8
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 4.5e-86 323.6 806 33.0
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 4.5e-86 323.6 785 34.5
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 7.7e-86 322.8 792 33.3
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 1.0e-85 322.4 800 33.0
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 1.3e-85 322.0 799 33.7
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 2.2e-85 321.2 798 32.8
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 6.5e-85 319.7 797 32.7
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 1.4e-84 318.5 787 32.1
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 1.9e-84 318.2 800 34.1
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 2.5e-84 317.8 799 33.4
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 5.5e-84 316.6 805 33.2
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 7.2e-84 316.2 790 33.4
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 1.2e-83 315.5 794 33.6
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 1.6e-83 315.1 797 33.0
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 1.6e-83 315.1 790 33.0
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 3.6e-83 313.9 788 33.0
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 6.1e-83 313.2 783 33.7
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 1.0e-82 312.4 805 33.9
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 3.0e-82 310.8 784 33.4
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 5.1e-82 310.1 777 33.2
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 6.7e-82 309.7 794 32.5
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 3.3e-81 307.4 795 32.8
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 9.7e-81 305.8 788 32.7
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 1.7e-80 305.1 798 32.6
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 1.7e-80 305.1 701 34.7
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 3.1e-79 300.8 720 32.2
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 4.1e-79 300.4 772 31.9
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 9.1e-79 299.3 805 32.7
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 2.6e-78 297.7 772 33.2
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 3.5e-78 297.4 724 32.6
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 2.2e-77 294.7 806 32.4
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 3.8e-77 293.9 812 31.4
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 5.0e-77 293.5 793 32.5
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 3.2e-76 290.8 867 32.5
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 1.6e-75 288.5 812 31.3
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 4.7e-75 287.0 733 32.6
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 6.1e-75 286.6 802 32.8
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 2.3e-74 284.6 800 32.1
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 6.7e-74 283.1 780 31.3
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 6.7e-74 283.1 623 35.2
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 6.7e-74 283.1 697 33.6
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 9.7e-73 279.3 574 35.5
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 1.3e-72 278.9 830 30.7
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.7e-72 277.3 790 31.0
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 2.4e-71 274.6 783 31.2
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.2e-70 272.3 800 32.1
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 2.0e-70 271.6 799 31.0
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 7.7e-70 269.6 712 35.0
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 1.0e-69 269.2 783 31.2
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 8.5e-69 266.2 786 31.9
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.5e-68 265.4 706 31.7
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 3.6e-67 260.8 724 30.4
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 8.0e-67 259.6 709 32.2
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 6.8e-66 256.5 557 33.4
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 2.0e-65 255.0 564 34.9
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 2.8e-64 251.1 572 34.8
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 1.1e-63 249.2 760 30.7
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 7.0e-63 246.5 757 30.4
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 8.0e-59 233.0 582 33.7
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 2.0e-57 228.4 337 43.0
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 6.3e-56 223.4 329 43.5
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 3.1e-55 221.1 478 35.4
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 7.0e-55 219.9 648 30.7
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 9.2e-55 219.5 262 48.5
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 3.5e-54 217.6 249 50.6
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 4.5e-54 217.2 708 29.7
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.3e-53 215.7 312 42.6
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 2.8e-51 208.0 633 29.4
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 1.2e-49 202.6 346 40.8
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 7.5e-41 173.3 506 30.8
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 5.4e-39 167.2 490 31.4
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 5.0e-37 160.6 849 24.6
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 5.6e-36 157.1 280 40.7
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 6.2e-35 153.7 560 30.2
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 2.7e-30 138.3 341 30.8
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 9.5e-28 129.8 158 49.4
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 1.2e-27 129.4 378 28.8
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 3.7e-24 117.9 479 25.9
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 6.4e-24 117.1 388 30.2
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.6e-22 112.5 343 26.5
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 5.2e-18 97.4 272 27.9
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 4.9e-16 90.9 61 73.8
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 7.8e-14 83.6 248 27.4
SEGI_16706 Sequoiadendron giganteum HOM05D003691 ORTHO05D017750 1.7e-13 82.4 128 39.1
C04p62090 Brassica napus HOM05D003691 ORTHO05D004288 6.6e-13 80.5 134 38.1
SEGI_15855 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 2.5e-12 78.6 127 39.4
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 5.6e-12 77.4 162 36.4
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 3.6e-11 74.7 176 30.1
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 8.1e-11 73.6 69 52.2
Cre13.g589300 Chlamydomonas reinhardtii HOM05D003691 ORTHO05D004288 1.1e-10 73.2 296 26.4
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 2.4e-10 72.0 52 61.5
EL10Ac4g08622 Beta vulgaris HOM05D003691 ORTHO05D019836 9.0e-10 70.1 56 51.8
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 2.9e-08 65.1 56 50.0
Glyma.13G310451 Glycine max HOM05D003691 ORTHO05D004288 1.9e-07 62.4 50 46.0
TPR.G2961 Trifolium pratense HOM05D001978 ORTHO05D003036 3.2e-07 61.6 58 44.8
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 6.0e-06 57.4 46 60.9


User provided reference genes

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