Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g26165 Chara braunii HOM05D005974 ORTHO05D007201 1.3e-108 396.4 197 100.0
Atru.chr7.2057 Acer truncatum HOM05D005974 ORTHO05D007201 8.2e-10 68.2 52 67.3
MCO14G391 Micromonas commoda HOM05D005974 ORTHO05D007201 8.2e-10 68.2 47 63.8
Nn7g37050 Nelumbo nucifera HOM05D005974 ORTHO05D007201 8.2e-10 68.2 51 64.7
Zm00001eb153590 Zea mays HOM05D005974 ORTHO05D007201 8.2e-10 68.2 38 81.6
vmacro11047 Vaccinium macrocarpon HOM05D005974 ORTHO05D007201 1.1e-09 67.8 58 60.3
CANSAT80G2257 Cannabis sativa HOM05D005974 ORTHO05D007201 1.4e-09 67.4 66 56.1
FvH4_2g35300 Fragaria vesca HOM05D005974 ORTHO05D007201 1.8e-09 67.0 59 62.7
FAN27G3236 Fragaria x ananassa HOM05D005974 ORTHO05D007201 1.8e-09 67.0 59 62.7
GSVIVG01035293001 Vitis vinifera HOM05D005974 ORTHO05D007201 2.4e-09 66.6 58 63.8
Dinv27921 Davidia involucrata HOM05D005974 ORTHO05D007201 3.1e-09 66.2 59 61.0
Glyma.06G088000 Glycine max HOM05D005974 ORTHO05D007201 3.1e-09 66.2 83 49.4
Mapoly0137s0001 Marchantia polymorpha HOM05D005974 ORTHO05D007201 3.1e-09 66.2 50 70.0
AagrBONN_evm.TU.Sc2ySwM_344.1805 Anthoceros agrestis HOM05D005974 ORTHO05D007201 4.1e-09 65.9 53 69.8
HanXRQChr17g0539061 Helianthus annuus HOM05D005974 ORTHO05D007201 4.1e-09 65.9 51 64.7
Thhalv10002006m.g Eutrema salsugineum HOM05D005974 ORTHO05D007201 5.3e-09 65.5 46 69.6
QL12p041028 Quercus lobata HOM05D005974 ORTHO05D007201 5.3e-09 65.5 87 46.0
BcaB01g04210 Brassica carinata HOM05D005974 ORTHO05D007201 7.0e-09 65.1 30 96.7
BcaC01g06194 Brassica carinata HOM05D005974 ORTHO05D007201 7.0e-09 65.1 30 96.7
A03p15570 Brassica napus HOM05D005974 ORTHO05D007201 7.0e-09 65.1 38 81.6
BolC3t14221H Brassica oleracea HOM05D005974 ORTHO05D007201 7.0e-09 65.1 30 96.7
Cc08_g09880 Coffea canephora HOM05D005974 ORTHO05D007201 7.0e-09 65.1 102 45.1
Os01g0743400 Oryza sativa ssp. japonica HOM05D005974 ORTHO05D007201 7.0e-09 65.1 44 70.5
SalBow1G5620 Salvia bowleyana HOM05D005974 ORTHO05D007201 7.0e-09 65.1 66 48.5
SMO116G0397 Selaginella moellendorffii HOM05D005974 ORTHO05D007201 7.0e-09 65.1 44 65.9
Thecc.09G047600 Theobroma cacao HOM05D005974 ORTHO05D007201 7.0e-09 65.1 105 47.6
Ca_15573_v3 Cicer arietinum L. HOM05D005974 ORTHO05D007201 9.1e-09 64.7 47 68.1
COL.COLO4_20996 Corchorus olitorius HOM05D005974 ORTHO05D007201 9.1e-09 64.7 73 56.2
Dinv23389 Davidia involucrata HOM05D005974 ORTHO05D007201 9.1e-09 64.7 38 78.9
Duzib187G1338 Durio zibethinus HOM05D005974 ORTHO05D007201 9.1e-09 64.7 102 47.1
FAN15G0062 Fragaria x ananassa HOM05D005974 ORTHO05D007201 9.1e-09 64.7 59 61.0
FAN20G0082 Fragaria x ananassa HOM05D005974 ORTHO05D007201 9.1e-09 64.7 59 61.0
Prupe.1G445200 Prunus persica HOM05D005974 ORTHO05D007201 9.1e-09 64.7 70 52.9
PGR044G1757 Punica granatum HOM05D005974 ORTHO05D007201 9.1e-09 64.7 51 62.7
CARHR115390 Cardamine hirsuta HOM05D005974 ORTHO05D007201 1.2e-08 64.3 37 78.4
Ciclev10010686m.g Citrus clementina HOM05D005974 ORTHO05D007201 1.2e-08 64.3 46 69.6
Manes.03G060100 Manihot esculenta HOM05D005974 ORTHO05D007201 1.2e-08 64.3 51 62.7
PGR044G0481 Punica granatum HOM05D005974 ORTHO05D007201 1.2e-08 64.3 58 55.2
RcHm_v2.0_Chr6g0306611 Rosa chinensis HOM05D005974 ORTHO05D007201 1.2e-08 64.3 59 57.6
HPP92_024453 Vanilla planifolia HOM05D005974 ORTHO05D007201 1.2e-08 64.3 82 42.7
CSS0034694 Camellia sinensis var. sinensis HOM05D005974 ORTHO05D007201 1.6e-08 63.9 59 57.6
Glyma.04G086500 Glycine max HOM05D005974 ORTHO05D007201 1.6e-08 63.9 38 81.6
Medtr3g110360 Medicago truncatula HOM05D005974 ORTHO05D007201 1.6e-08 63.9 38 81.6
BcaB06g29640 Brassica carinata HOM05D005974 ORTHO05D007201 2.0e-08 63.5 32 84.4
AUR62007372 Chenopodium quinoa HOM05D005974 ORTHO05D007201 2.0e-08 63.5 37 75.7
AUR62018617 Chenopodium quinoa HOM05D005974 ORTHO05D007201 2.0e-08 63.5 41 65.9
ClCG11G015070 Citrullus lanatus HOM05D005974 ORTHO05D007201 2.0e-08 63.5 34 76.5
Migut.E01538 Erythranthe guttata HOM05D005974 ORTHO05D007201 2.0e-08 63.5 60 53.3
Lj8C569G5 Lonicera japonica HOM05D000602 ORTHO05D001147 2.0e-08 63.5 58 53.4
MD15G1090800 Malus domestica HOM05D005974 ORTHO05D007201 2.0e-08 63.5 71 53.5
PSO832G2350 Papaver somniferum HOM05D005974 ORTHO05D007201 2.0e-08 63.5 48 62.5
Potri.003G158000 Populus trichocarpa HOM05D005974 ORTHO05D007201 2.0e-08 63.5 37 75.7
Rhsim02G0175300 Rhododendron simsii HOM05D005974 ORTHO05D007201 2.0e-08 63.5 46 67.4
Sabra03G0114600 Salix brachista HOM05D005974 ORTHO05D007201 2.0e-08 63.5 37 75.7
C03p18200 Brassica napus HOM05D005974 ORTHO05D007201 2.6e-08 63.2 29 96.6
BraA03t10849Z Brassica rapa HOM05D005974 ORTHO05D007201 2.6e-08 63.2 29 96.6
Carub.0004s0567 Capsella rubella HOM05D005974 ORTHO05D007201 2.6e-08 63.2 30 93.3
CAN.G208.66 Capsicum annuum HOM05D005974 ORTHO05D007201 2.6e-08 63.2 37 73.0
Lsat_1_v5_gn_3_25800 Lactuca sativa HOM05D005974 ORTHO05D007201 2.6e-08 63.2 37 81.1
Hund30885 Selenicereus undatus HOM05D005974 ORTHO05D007201 2.6e-08 63.2 52 57.7
Aqoxy7G01418 Aquilegia oxysepala HOM05D005974 ORTHO05D007201 3.5e-08 62.8 30 86.7
MSTRG.14030 Avicennia marina HOM05D005974 ORTHO05D007201 3.5e-08 62.8 60 53.3
Eucgr.C02982 Eucalyptus grandis HOM05D005974 ORTHO05D007201 3.5e-08 62.8 38 76.3
Lj1g0014442 Lotus japonicus HOM05D005974 ORTHO05D007201 3.5e-08 62.8 30 90.0
PSO063G5342 Papaver somniferum HOM05D005974 ORTHO05D007201 3.5e-08 62.8 43 60.5
Sp4g05700 Schrenkiella parvula HOM05D005974 ORTHO05D007201 3.5e-08 62.8 38 76.3
Sc09g0009450 Simmondsia chinensis HOM05D005974 ORTHO05D007201 3.5e-08 62.8 73 49.3
Solyc12g095850.2 Solanum lycopersicum HOM05D005974 ORTHO05D007201 3.5e-08 62.8 58 53.4
Sopen12g031750 Solanum pennellii HOM05D005974 ORTHO05D007201 3.5e-08 62.8 58 53.4
arahy.Tifrunner.gnm1.ann1.CL6SAC Arachis hypogaea HOM05D005974 ORTHO05D007201 4.5e-08 62.4 38 78.9
arahy.Tifrunner.gnm1.ann1.I5HST9 Arachis hypogaea HOM05D005974 ORTHO05D007201 4.5e-08 62.4 38 78.9
Nitab4.5_0001737g0060 Nicotiana tabacum HOM05D005974 ORTHO05D007201 4.5e-08 62.4 94 41.5
Phvul.009G111700 Phaseolus vulgaris HOM05D005974 ORTHO05D007201 4.5e-08 62.4 38 78.9
Actinidia30286 Actinidia chinensis HOM05D005974 ORTHO05D007201 5.9e-08 62.0 47 70.2
ATR0705G128 Amborella trichopoda HOM05D005974 ORTHO05D007201 5.9e-08 62.0 30 93.3
AT2G25840 Arabidopsis thaliana HOM05D005974 ORTHO05D007201 5.9e-08 62.0 39 74.4
EL10Ac5g11988 Beta vulgaris HOM05D005974 ORTHO05D007201 5.9e-08 62.0 30 86.7
BcaB06g29641 Brassica carinata HOM05D005974 ORTHO05D007201 5.9e-08 62.0 30 90.0
A04p20060 Brassica napus HOM05D005974 ORTHO05D007201 5.9e-08 62.0 30 90.0
C04p55740 Brassica napus HOM05D005974 ORTHO05D007201 5.9e-08 62.0 30 90.0
BolC4t27100H Brassica oleracea HOM05D005974 ORTHO05D007201 5.9e-08 62.0 30 90.0
BraA04t17588Z Brassica rapa HOM05D005974 ORTHO05D007201 5.9e-08 62.0 30 90.0
Cpa.g.sc7.214 Carica papaya HOM05D005974 ORTHO05D007201 5.9e-08 62.0 107 43.9
CiPaw.08G027100 Carya illinoinensis HOM05D005974 ORTHO05D007201 5.9e-08 62.0 108 42.6
ECA246G2549 Erigeron canadensis HOM05D005974 ORTHO05D007201 5.9e-08 62.0 51 60.8
Gohir.D06G090940 Gossypium hirsutum HOM05D005974 ORTHO05D007201 5.9e-08 62.0 39 74.4
Nitab4.5_0001309g0090 Nicotiana tabacum HOM05D005974 ORTHO05D007201 5.9e-08 62.0 94 40.4
Sed0012339 Sechium edule HOM05D005974 ORTHO05D007201 5.9e-08 62.0 50 62.0
Hund30611 Selenicereus undatus HOM05D005974 ORTHO05D007201 5.9e-08 62.0 52 55.8
VMungo1309G1913 Vigna mungo HOM05D005974 ORTHO05D007201 5.9e-08 62.0 38 78.9
AL4G17680 Arabidopsis lyrata HOM05D005974 ORTHO05D007201 7.7e-08 61.6 59 57.6
Gohir.A06G091700 Gossypium hirsutum HOM05D005974 ORTHO05D007201 7.7e-08 61.6 94 47.9
THA.LOC104803747 Tarenaya hassleriana HOM05D005974 ORTHO05D007201 7.7e-08 61.6 30 86.7
TWI63G1635 Tripterygium wilfordii HOM05D005974 ORTHO05D007201 7.7e-08 61.6 39 69.2
HanXRQChr06g0174221 Helianthus annuus HOM05D005974 ORTHO05D007201 1.0e-07 61.2 45 66.7
Lalb_Chr08g0242951 Lupinus albus HOM05D005974 ORTHO05D007201 1.0e-07 61.2 38 76.3
MBI04_g20303_MAGBIO Magnolia biondii HOM05D005974 ORTHO05D007201 1.0e-07 61.2 30 90.0
Pp3c13_12220 Physcomitrium patens HOM05D005974 ORTHO05D007201 1.0e-07 61.2 54 61.1
Psat5g020640 Pisum sativum HOM05D005974 ORTHO05D007201 1.0e-07 61.2 38 76.3
Aa31LG5G9820 Aethionema arabicum HOM05D005974 ORTHO05D007201 1.3e-07 60.8 60 53.3
CDE02G2857 Ceratophyllum demersum HOM05D005974 ORTHO05D007201 1.3e-07 60.8 46 67.4
Oeu006965.1 Olea europaea HOM05D005974 ORTHO05D007201 1.3e-07 60.8 60 53.3
Gohir.D06G091000 Gossypium hirsutum HOM05D005974 ORTHO05D007201 1.7e-07 60.5 92 47.8
Gorai.010G105000 Gossypium raimondii HOM05D005974 ORTHO05D007201 1.7e-07 60.5 92 47.8
CsaV3_3G048470 Cucumis sativus L. HOM05D005974 ORTHO05D007201 2.2e-07 60.1 71 49.3
Thhalv10002003m.g Eutrema salsugineum HOM05D005974 ORTHO05D007201 2.2e-07 60.1 38 78.9
PRCOL_00006768 Prasinoderma coloniale HOM05D005974 ORTHO05D007201 2.2e-07 60.1 39 69.2
TPR.G12488 Trifolium pratense HOM05D005974 ORTHO05D007201 2.2e-07 60.1 30 86.7
MELO3C003472.2 Cucumis melo HOM05D005974 ORTHO05D007201 2.9e-07 59.7 71 49.3
SGA_v2.0_scaffold169G38660 Striga asiatica HOM05D005974 ORTHO05D007201 2.9e-07 59.7 58 55.2
TAR624G1429 Trochodendron aralioides HOM05D005974 ORTHO05D007201 2.9e-07 59.7 59 54.2
Cre05.g238322 Chlamydomonas reinhardtii HOM05D005974 ORTHO05D007201 6.5e-07 58.5 75 44.0
FvH4_5g31180 Fragaria vesca HOM05D000076 ORTHO05D005802 4.2e-06 55.8 30 76.7


User provided reference genes

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