Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g26161 Chara braunii HOM05D005974 ORTHO05D007201 4.9e-149 532.7 344 100.0
AagrBONN_evm.TU.Sc2ySwM_344.1805 Anthoceros agrestis HOM05D005974 ORTHO05D007201 1.8e-82 311.6 204 73.5
Lj1g0014442 Lotus japonicus HOM05D005974 ORTHO05D007201 5.2e-82 310.1 204 71.1
Glyma.04G086500 Glycine max HOM05D005974 ORTHO05D007201 1.2e-81 308.9 207 70.0
Cc08_g09880 Coffea canephora HOM05D005974 ORTHO05D007201 2.0e-81 308.1 204 72.1
Aqoxy7G01418 Aquilegia oxysepala HOM05D005974 ORTHO05D007201 3.4e-81 307.4 204 72.1
Sc09g0009450 Simmondsia chinensis HOM05D005974 ORTHO05D007201 9.8e-81 305.8 205 70.7
Glyma.06G088000 Glycine max HOM05D005974 ORTHO05D007201 1.3e-80 305.4 204 69.6
HanXRQChr06g0174211 Helianthus annuus HOM05D005974 ORTHO05D007201 2.2e-80 304.7 206 68.9
HanXRQChr06g0174221 Helianthus annuus HOM05D005974 ORTHO05D007201 2.8e-80 304.3 204 70.1
Os01g0743400 Oryza sativa ssp. japonica HOM05D005974 ORTHO05D007201 2.8e-80 304.3 204 71.1
arahy.Tifrunner.gnm1.ann1.CL6SAC Arachis hypogaea HOM05D005974 ORTHO05D007201 4.8e-80 303.5 203 70.4
Dinv23389 Davidia involucrata HOM05D005974 ORTHO05D007201 4.8e-80 303.5 204 70.1
CANSAT80G2257 Cannabis sativa HOM05D005974 ORTHO05D007201 6.3e-80 303.1 204 70.1
Mapoly0137s0001 Marchantia polymorpha HOM05D005974 ORTHO05D007201 6.3e-80 303.1 203 70.9
Manes.03G060100 Manihot esculenta HOM05D005974 ORTHO05D007201 8.3e-80 302.8 204 70.1
Potri.003G158000 Populus trichocarpa HOM05D005974 ORTHO05D007201 8.3e-80 302.8 204 71.1
Sabra03G0114600 Salix brachista HOM05D005974 ORTHO05D007201 8.3e-80 302.8 204 71.1
Lalb_Chr08g0242951 Lupinus albus HOM05D005974 ORTHO05D007201 1.1e-79 302.4 204 69.6
Phvul.009G111700 Phaseolus vulgaris HOM05D005974 ORTHO05D007201 1.1e-79 302.4 204 70.1
HanXRQChr17g0539061 Helianthus annuus HOM05D005974 ORTHO05D007201 1.8e-79 301.6 204 69.1
Lsat_1_v5_gn_3_25800 Lactuca sativa HOM05D005974 ORTHO05D007201 1.8e-79 301.6 204 69.1
Atru.chr7.2057 Acer truncatum HOM05D005974 ORTHO05D007201 2.4e-79 301.2 204 71.1
Lj8C569G5 Lonicera japonica HOM05D000602 ORTHO05D001147 5.4e-79 300.1 204 70.1
RcHm_v2.0_Chr6g0306611 Rosa chinensis HOM05D005974 ORTHO05D007201 5.4e-79 300.1 204 70.1
SalBow1G5620 Salvia bowleyana HOM05D005974 ORTHO05D007201 7.0e-79 299.7 204 68.1
MD15G1090800 Malus domestica HOM05D005974 ORTHO05D007201 9.1e-79 299.3 204 70.1
DCAR_018521 Daucus carota HOM05D005974 ORTHO05D007201 1.2e-78 298.9 204 69.6
Gohir.D06G090920 Gossypium hirsutum HOM05D005974 ORTHO05D007201 1.2e-78 298.9 203 70.4
Gohir.D06G091000 Gossypium hirsutum HOM05D005974 ORTHO05D007201 1.2e-78 298.9 203 70.4
COL.COLO4_20996 Corchorus olitorius HOM05D005974 ORTHO05D007201 1.6e-78 298.5 204 70.6
PGR044G0481 Punica granatum HOM05D005974 ORTHO05D007201 1.6e-78 298.5 204 69.1
Hund14385 Selenicereus undatus HOM05D005974 ORTHO05D007201 1.6e-78 298.5 204 69.6
Gorai.010G105000 Gossypium raimondii HOM05D005974 ORTHO05D007201 2.0e-78 298.1 203 70.4
Pp3c13_12220 Physcomitrium patens HOM05D005974 ORTHO05D007201 2.0e-78 298.1 203 70.4
Ciclev10010686m.g Citrus clementina HOM05D005974 ORTHO05D007201 2.7e-78 297.7 204 70.1
SGA_v2.0_scaffold169G38660 Striga asiatica HOM05D005974 ORTHO05D007201 2.7e-78 297.7 204 69.6
FvH4_2g35300 Fragaria vesca HOM05D005974 ORTHO05D007201 3.5e-78 297.4 204 69.1
FAN27G3236 Fragaria x ananassa HOM05D005974 ORTHO05D007201 3.5e-78 297.4 204 69.1
ECA246G2549 Erigeron canadensis HOM05D005974 ORTHO05D007201 4.5e-78 297.0 204 69.1
Eucgr.C02982 Eucalyptus grandis HOM05D005974 ORTHO05D007201 4.5e-78 297.0 204 69.1
TPR.G12488 Trifolium pratense HOM05D005974 ORTHO05D007201 4.5e-78 297.0 204 68.1
Ca_15573_v3 Cicer arietinum L. HOM05D005974 ORTHO05D007201 5.9e-78 296.6 204 68.1
CSS0034694 Camellia sinensis var. sinensis HOM05D005974 ORTHO05D007201 7.7e-78 296.2 204 70.6
FAN20G0082 Fragaria x ananassa HOM05D005974 ORTHO05D007201 7.7e-78 296.2 204 69.1
Gohir.A06G091700 Gossypium hirsutum HOM05D005974 ORTHO05D007201 7.7e-78 296.2 203 70.0
PGR044G1757 Punica granatum HOM05D005974 ORTHO05D007201 1.0e-77 295.8 204 68.6
Cpa.g.sc7.214 Carica papaya HOM05D005974 ORTHO05D007201 1.3e-77 295.4 204 69.1
CAN.G208.66 Capsicum annuum HOM05D005974 ORTHO05D007201 1.7e-77 295.0 204 68.6
AUR62018617 Chenopodium quinoa HOM05D005974 ORTHO05D007201 1.7e-77 295.0 204 68.6
Migut.E01538 Erythranthe guttata HOM05D005974 ORTHO05D007201 1.7e-77 295.0 204 68.1
ATR0705G128 Amborella trichopoda HOM05D005974 ORTHO05D007201 2.3e-77 294.7 205 67.3
Nitab4.5_0001309g0090 Nicotiana tabacum HOM05D005974 ORTHO05D007201 2.3e-77 294.7 204 68.1
Oeu006965.1 Olea europaea HOM05D005974 ORTHO05D007201 2.3e-77 294.7 204 68.6
THA.LOC104803747 Tarenaya hassleriana HOM05D005974 ORTHO05D007201 2.9e-77 294.3 207 68.6
Medtr3g110360 Medicago truncatula HOM05D005974 ORTHO05D007201 3.8e-77 293.9 204 68.1
GSVIVG01035293001 Vitis vinifera HOM05D005974 ORTHO05D007201 5.0e-77 293.5 204 67.6
MSTRG.14030 Avicennia marina HOM05D005974 ORTHO05D007201 6.6e-77 293.1 204 67.6
CsaV3_3G048470 Cucumis sativus L. HOM05D005974 ORTHO05D007201 8.6e-77 292.7 204 69.1
CiPaw.08G027100 Carya illinoinensis HOM05D005974 ORTHO05D007201 1.1e-76 292.4 204 68.1
AUR62007372 Chenopodium quinoa HOM05D005974 ORTHO05D007201 1.5e-76 292.0 204 67.6
FAN15G0062 Fragaria x ananassa HOM05D005974 ORTHO05D007201 1.5e-76 292.0 204 68.1
TWI63G1635 Tripterygium wilfordii HOM05D005974 ORTHO05D007201 1.5e-76 292.0 203 68.5
PSO063G5342 Papaver somniferum HOM05D005974 ORTHO05D007201 1.9e-76 291.6 204 67.6
Solyc12g095850.2 Solanum lycopersicum HOM05D005974 ORTHO05D007201 1.9e-76 291.6 204 67.6
BcaB01g04210 Brassica carinata HOM05D005974 ORTHO05D007201 2.5e-76 291.2 202 69.8
A03p15570 Brassica napus HOM05D005974 ORTHO05D007201 3.3e-76 290.8 202 69.8
Thhalv10002006m.g Eutrema salsugineum HOM05D005974 ORTHO05D007201 3.3e-76 290.8 202 68.8
PSO832G2350 Papaver somniferum HOM05D005974 ORTHO05D007201 4.2e-76 290.4 204 67.6
Actinidia30286 Actinidia chinensis HOM05D005974 ORTHO05D007201 5.5e-76 290.0 204 67.6
Sopen12g031750 Solanum pennellii HOM05D005974 ORTHO05D007201 5.5e-76 290.0 204 67.2
AL4G17680 Arabidopsis lyrata HOM05D005974 ORTHO05D007201 7.2e-76 289.7 202 68.3
BcaC01g06194 Brassica carinata HOM05D005974 ORTHO05D007201 7.2e-76 289.7 202 69.3
C03p18200 Brassica napus HOM05D005974 ORTHO05D007201 7.2e-76 289.7 202 69.3
BolC3t14221H Brassica oleracea HOM05D005974 ORTHO05D007201 7.2e-76 289.7 202 69.3
ClCG11G015070 Citrullus lanatus HOM05D005974 ORTHO05D007201 7.2e-76 289.7 204 67.6
Nn7g37050 Nelumbo nucifera HOM05D005974 ORTHO05D007201 7.2e-76 289.7 204 67.6
EL10Ac5g11988 Beta vulgaris HOM05D005974 ORTHO05D007201 9.5e-76 289.3 204 67.2
Thhalv10002003m.g Eutrema salsugineum HOM05D005974 ORTHO05D007201 9.5e-76 289.3 203 68.0
CARHR115390 Cardamine hirsuta HOM05D005974 ORTHO05D007201 1.6e-75 288.5 202 66.8
Rhsim02G0175300 Rhododendron simsii HOM05D005974 ORTHO05D007201 1.6e-75 288.5 204 67.2
Sp4g05700 Schrenkiella parvula HOM05D005974 ORTHO05D007201 1.6e-75 288.5 202 68.8
Thecc.09G047600 Theobroma cacao HOM05D005974 ORTHO05D007201 1.8e-74 285.0 202 66.8
BraA03t10849Z Brassica rapa HOM05D005974 ORTHO05D007201 2.3e-74 284.6 207 68.1
BcaB06g29640 Brassica carinata HOM05D005974 ORTHO05D007201 3.0e-74 284.3 202 66.8
C04p55740 Brassica napus HOM05D005974 ORTHO05D007201 3.0e-74 284.3 202 66.8
AT2G25840 Arabidopsis thaliana HOM05D005974 ORTHO05D007201 4.0e-74 283.9 202 66.8
A04p20060 Brassica napus HOM05D005974 ORTHO05D007201 5.2e-74 283.5 202 66.8
BraA04t17588Z Brassica rapa HOM05D005974 ORTHO05D007201 5.2e-74 283.5 202 66.8
MELO3C003472.2 Cucumis melo HOM05D005974 ORTHO05D007201 6.8e-74 283.1 213 65.7
BolC4t27100H Brassica oleracea HOM05D005974 ORTHO05D007201 2.6e-73 281.2 202 66.3
Carub.0004s0567 Capsella rubella HOM05D005974 ORTHO05D007201 5.7e-73 280.0 202 66.3
Cre05.g238322 Chlamydomonas reinhardtii HOM05D005974 ORTHO05D007201 3.5e-70 270.8 205 61.5
SMO116G0397 Selaginella moellendorffii HOM05D005974 ORTHO05D007201 7.8e-70 269.6 205 64.4
PRCOL_00006768 Prasinoderma coloniale HOM05D005974 ORTHO05D007201 6.6e-69 266.5 206 63.1
TAR624G1429 Trochodendron aralioides HOM05D005974 ORTHO05D007201 8.6e-69 266.2 172 72.1
HPP92_024453 Vanilla planifolia HOM05D005974 ORTHO05D007201 4.3e-68 263.8 203 63.5
Aa31LG5G9820 Aethionema arabicum HOM05D005974 ORTHO05D007201 2.1e-67 261.5 241 56.0
Peaxi162Scf00064g01533 Petunia axillaris HOM05D005974 ORTHO05D007201 2.0e-65 255.0 204 60.8
MCO14G391 Micromonas commoda HOM05D005974 ORTHO05D007201 7.5e-65 253.1 213 58.2
Dinv27921 Davidia involucrata HOM05D005974 ORTHO05D007201 3.7e-64 250.8 204 61.3
arahy.Tifrunner.gnm1.ann1.I5HST9 Arachis hypogaea HOM05D005974 ORTHO05D007201 4.1e-63 247.3 203 61.6
MBI04_g20303_MAGBIO Magnolia biondii HOM05D005974 ORTHO05D007201 1.6e-62 245.4 204 61.8
QL12p041028 Quercus lobata HOM05D005974 ORTHO05D007201 2.7e-62 244.6 168 70.2
Psat5g020640 Pisum sativum HOM05D005974 ORTHO05D007201 3.5e-62 244.2 161 69.6
CDE02G2857 Ceratophyllum demersum HOM05D005974 ORTHO05D007201 6.0e-62 243.4 161 70.2
SGA_v2.0_scaffold163G38058 Striga asiatica HOM05D005974 ORTHO05D007201 2.5e-60 238.0 206 59.2
Nitab4.5_0001737g0060 Nicotiana tabacum HOM05D005974 ORTHO05D007201 5.6e-60 236.9 208 59.6
vmacro11047 Vaccinium macrocarpon HOM05D005974 ORTHO05D007201 3.5e-54 217.6 203 56.2
VMungo1309G1913 Vigna mungo HOM05D005974 ORTHO05D007201 6.2e-51 206.8 131 74.8
Sed0012339 Sechium edule HOM05D005974 ORTHO05D007201 1.2e-49 202.6 133 73.7
Duzib187G1338 Durio zibethinus HOM05D005974 ORTHO05D007201 2.7e-46 191.4 204 52.5
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 4.0e-34 151.0 149 50.3
Ah.07g201090 Amaranthus hybridus HOM05D005974 ORTHO05D007201 8.4e-32 143.3 92 71.7
Prupe.1G445200 Prunus persica HOM05D005974 ORTHO05D007201 2.7e-30 138.3 88 76.1
SEGI_31887 Sequoiadendron giganteum HOM05D005974 ORTHO05D007201 7.8e-30 136.7 104 60.6
Haze_21915 Corylus avellana HOM05D005974 ORTHO05D007201 4.3e-28 131.0 87 77.0
VMungo1309G1904 Vigna mungo HOM05D005974 ORTHO05D007201 1.6e-19 102.4 73 63.0
Haze_27433 Corylus avellana HOM05D005974 ORTHO05D007201 4.8e-19 100.9 139 44.6
Cfa024571 Carpinus fangiana HOM05D005974 ORTHO05D007201 5.8e-17 94.0 210 32.9
Lsat_1_v5_gn_9_95260 Lactuca sativa HOM05D005974 ORTHO05D007201 7.6e-17 93.6 163 35.6
BcaB06g29641 Brassica carinata HOM05D005974 ORTHO05D007201 3.0e-13 81.6 47 76.6
Zm00001eb153590 Zea mays HOM05D005974 ORTHO05D007201 6.7e-13 80.5 47 78.7
arahy.Tifrunner.gnm1.ann1.05PEK3 Arachis hypogaea HOM05D005974 ORTHO05D038942 1.2e-09 69.7 100 37.0


User provided reference genes

Program Settings