Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g26142 Chara braunii HOM05D002553 ORTHO05D002767 2.2e-227 792.3 520 100.0
ATR0626G263 Amborella trichopoda HOM05D002553 ORTHO05D002767 1.3e-25 122.1 127 48.8
Ca_10093_v3 Cicer arietinum L. HOM05D002553 ORTHO05D002767 2.8e-25 120.9 108 55.6
Lsat_1_v5_gn_1_25020 Lactuca sativa HOM05D002553 ORTHO05D002767 3.7e-25 120.6 112 55.4
Haze_04233 Corylus avellana HOM05D002553 ORTHO05D002767 4.8e-25 120.2 143 45.5
PSO210G1325 Papaver somniferum HOM05D002553 ORTHO05D002767 4.8e-25 120.2 109 55.0
Zm00001eb017520 Zea mays HOM05D002553 ORTHO05D002767 4.8e-25 120.2 118 52.5
CANSAT54G1986 Cannabis sativa HOM05D002553 ORTHO05D002767 6.3e-25 119.8 151 43.7
Thhalv10003627m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 6.3e-25 119.8 127 51.2
MBI17_g29610_MAGBIO Magnolia biondii HOM05D002553 ORTHO05D002767 6.3e-25 119.8 109 55.0
Rhsim05G0144300 Rhododendron simsii HOM05D002553 ORTHO05D002767 6.3e-25 119.8 117 51.3
Sed0024851 Sechium edule HOM05D002553 ORTHO05D002767 6.3e-25 119.8 109 53.2
TAR636G3134 Trochodendron aralioides HOM05D002553 ORTHO05D002767 6.3e-25 119.8 109 54.1
vmacro19641 Vaccinium macrocarpon HOM05D002553 ORTHO05D002767 8.2e-25 119.4 121 52.1
Aa31LG5G15560 Aethionema arabicum HOM05D002553 ORTHO05D002767 1.1e-24 119.0 121 51.2
Nn4g26152 Nelumbo nucifera HOM05D002553 ORTHO05D002767 1.1e-24 119.0 109 55.0
TPR.G2739 Trifolium pratense HOM05D002553 ORTHO05D002767 1.1e-24 119.0 109 56.0
Glyma.03G240100 Glycine max HOM05D002553 ORTHO05D002767 1.8e-24 118.2 109 53.2
TWI12G0069 Tripterygium wilfordii HOM05D002553 ORTHO05D002767 1.8e-24 118.2 117 53.8
AL6G39600 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 2.4e-24 117.9 117 51.3
AT5G27410 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 2.4e-24 117.9 117 51.3
Carub.0006s2513 Capsella rubella HOM05D002553 ORTHO05D002767 2.4e-24 117.9 127 48.0
Lj9C682T7 Lonicera japonica HOM05D002553 ORTHO05D002767 2.4e-24 117.9 117 50.4
QL03p004498 Quercus lobata HOM05D002553 ORTHO05D002767 2.4e-24 117.9 109 53.2
Lalb_Chr18g0045531 Lupinus albus HOM05D002553 ORTHO05D002767 4.1e-24 117.1 113 52.2
Medtr1g083370 Medicago truncatula HOM05D002553 ORTHO05D002767 4.1e-24 117.1 109 54.1
SGA_v2.0_scaffold43G16279 Striga asiatica HOM05D002553 ORTHO05D002767 4.1e-24 117.1 127 47.2
Atru.chr2.475 Acer truncatum HOM05D002553 ORTHO05D002767 7.0e-24 116.3 109 52.3
Glyma.19G237000 Glycine max HOM05D002553 ORTHO05D002767 7.0e-24 116.3 109 52.3
Phvul.006G093911 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 7.0e-24 116.3 109 53.2
GSVIVG01000009001 Vitis vinifera HOM05D002553 ORTHO05D002767 7.0e-24 116.3 109 54.1
Aqoxy5G00545 Aquilegia oxysepala HOM05D002553 ORTHO05D002767 9.1e-24 115.9 117 50.4
CARHR186010 Cardamine hirsuta HOM05D002553 ORTHO05D002767 9.1e-24 115.9 117 50.4
ClCG02G016020 Citrullus lanatus HOM05D002553 ORTHO05D002767 9.1e-24 115.9 109 52.3
Dinv22901 Davidia involucrata HOM05D002553 ORTHO05D002767 9.1e-24 115.9 109 53.2
Dinv23976 Davidia involucrata HOM05D002553 ORTHO05D002767 9.1e-24 115.9 109 53.2
Lj5g0009152 Lotus japonicus HOM05D002553 ORTHO05D002767 9.1e-24 115.9 109 54.1
Psat6g149240 Pisum sativum HOM05D002553 ORTHO05D002767 1.6e-23 115.2 109 53.2
Sp3g04040 Schrenkiella parvula HOM05D002553 ORTHO05D002767 1.6e-23 115.2 121 48.8
MSTRG.16977 Avicennia marina HOM05D002553 ORTHO05D002767 2.0e-23 114.8 117 48.7
Eucgr.B02001 Eucalyptus grandis HOM05D002553 ORTHO05D002767 2.0e-23 114.8 121 47.9
Medtr1g082470 Medicago truncatula HOM05D002553 ORTHO05D002767 2.0e-23 114.8 109 53.2
CsaV3_2G004990 Cucumis sativus L. HOM05D002553 ORTHO05D002767 2.6e-23 114.4 109 51.4
Glyma.10G156850 Glycine max HOM05D002553 ORTHO05D002767 2.6e-23 114.4 117 50.4
Hma1.2p1_0666F.1_g199470 Hydrangea macrophylla HOM05D002553 ORTHO05D002767 2.6e-23 114.4 109 54.1
THA.LOC104802808 Tarenaya hassleriana HOM05D002553 ORTHO05D002767 2.6e-23 114.4 113 52.2
BcaNung04368 Brassica carinata HOM05D002553 ORTHO05D002767 3.5e-23 114.0 117 50.4
Cc02_g32710 Coffea canephora HOM05D002553 ORTHO05D002767 3.5e-23 114.0 112 51.8
ECA247G0575 Erigeron canadensis HOM05D002553 ORTHO05D002767 3.5e-23 114.0 109 51.4
Thhalv10020427m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 3.5e-23 114.0 121 48.8
TAR362G0623 Trochodendron aralioides HOM05D002553 ORTHO05D002767 3.5e-23 114.0 109 54.1
AL3G15610 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 4.5e-23 113.6 121 49.6
AUR62000869 Chenopodium quinoa HOM05D002553 ORTHO05D002767 4.5e-23 113.6 109 51.4
BcaNung02463 Brassica carinata HOM05D002553 ORTHO05D002767 5.9e-23 113.2 117 49.6
C07p40730 Brassica napus HOM05D002553 ORTHO05D002767 5.9e-23 113.2 117 49.6
BolC7t44601H Brassica oleracea HOM05D002553 ORTHO05D002767 5.9e-23 113.2 117 49.6
MELO3C004297.2 Cucumis melo HOM05D002553 ORTHO05D002767 5.9e-23 113.2 117 49.6
A06p37580 Brassica napus HOM05D002553 ORTHO05D002767 7.7e-23 112.8 117 49.6
A09p05260 Brassica napus HOM05D002553 ORTHO05D002767 7.7e-23 112.8 109 53.2
BraA06t26677Z Brassica rapa HOM05D002553 ORTHO05D002767 7.7e-23 112.8 117 49.6
BraA09t36165Z Brassica rapa HOM05D002553 ORTHO05D002767 7.7e-23 112.8 109 53.2
Cfa006549 Carpinus fangiana HOM05D002553 ORTHO05D002767 7.7e-23 112.8 109 51.4
HanXRQChr02g0037091 Helianthus annuus HOM05D002553 ORTHO05D002767 1.0e-22 112.5 109 52.3
RcHm_v2.0_Chr3g0454121 Rosa chinensis HOM05D002553 ORTHO05D002767 1.0e-22 112.5 122 49.2
VMungo0540G1597 Vigna mungo HOM05D002553 ORTHO05D002767 1.0e-22 112.5 108 50.9
MSTRG.5079 Avicennia marina HOM05D002553 ORTHO05D002767 1.3e-22 112.1 117 47.9
Sc09g0003340 Simmondsia chinensis HOM05D002553 ORTHO05D002767 1.3e-22 112.1 109 51.4
Thecc.05G308000 Theobroma cacao HOM05D002553 ORTHO05D002767 1.3e-22 112.1 127 47.2
Carub.0003s0444 Capsella rubella HOM05D002553 ORTHO05D002767 1.7e-22 111.7 121 48.8
Potri.005G039100 Populus trichocarpa HOM05D002553 ORTHO05D002767 1.7e-22 111.7 109 51.4
PGR083G1620 Punica granatum HOM05D002553 ORTHO05D002767 1.7e-22 111.7 118 50.8
Hund07047 Selenicereus undatus HOM05D002553 ORTHO05D002767 1.7e-22 111.7 126 45.2
BcaC04g23681 Brassica carinata HOM05D002553 ORTHO05D002767 2.2e-22 111.3 112 51.8
BcaC04g23682 Brassica carinata HOM05D002553 ORTHO05D002767 2.2e-22 111.3 112 51.8
BNapus_Darmor_BZH_scaffold_114p00250 Brassica napus HOM05D002553 ORTHO05D002767 2.2e-22 111.3 121 47.9
BolC1t05708H Brassica oleracea HOM05D002553 ORTHO05D002767 2.2e-22 111.3 121 47.1
CARHR079530 Cardamine hirsuta HOM05D002553 ORTHO05D002767 2.2e-22 111.3 121 47.1
CiPaw.07G014800 Carya illinoinensis HOM05D002553 ORTHO05D002767 2.2e-22 111.3 109 51.4
Migut.B01190 Erythranthe guttata HOM05D002553 ORTHO05D002767 2.2e-22 111.3 117 47.0
Prupe.6G330000 Prunus persica HOM05D002553 ORTHO05D002767 2.9e-22 110.9 109 51.4
SMO356G0084 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 2.9e-22 110.9 116 50.9
MD04G1209000 Malus domestica HOM05D002553 ORTHO05D002767 3.8e-22 110.5 134 44.8
Duzib177G0165 Durio zibethinus HOM05D002553 ORTHO05D002767 5.0e-22 110.2 109 52.3
FAN14G5684 Fragaria x ananassa HOM05D002553 ORTHO05D002767 5.0e-22 110.2 115 48.7
FvH4_6g05350 Fragaria vesca HOM05D002553 ORTHO05D002767 8.5e-22 109.4 109 49.5
FAN09G0499 Fragaria x ananassa HOM05D002553 ORTHO05D002767 8.5e-22 109.4 109 49.5
FAN14G0929 Fragaria x ananassa HOM05D002553 ORTHO05D002767 8.5e-22 109.4 109 49.5
C09p05740 Brassica napus HOM05D002553 ORTHO05D002767 1.1e-21 109.0 109 52.3
BolC9t53501H Brassica oleracea HOM05D002553 ORTHO05D002767 1.1e-21 109.0 109 52.3
SalBow5G4087 Salvia bowleyana HOM05D002553 ORTHO05D002767 1.1e-21 109.0 132 43.9
PGSC0003DMG401028577 Solanum tuberosum HOM05D002553 ORTHO05D002767 1.1e-21 109.0 117 47.9
Sopen01g042240 Solanum pennellii HOM05D002553 ORTHO05D002767 1.5e-21 108.6 117 47.0
Manes.09G163850 Manihot esculenta HOM05D002553 ORTHO05D002767 1.9e-21 108.2 109 50.5
Cpa.g.sc48.14 Carica papaya HOM05D002553 ORTHO05D002767 2.5e-21 107.8 109 50.5
Ah.06g190110 Amaranthus hybridus HOM05D002553 ORTHO05D002767 3.2e-21 107.5 116 45.7
Solyc01g098700.4 Solanum lycopersicum HOM05D002553 ORTHO05D002767 3.2e-21 107.5 109 48.6
COL.COLO4_13515 Corchorus olitorius HOM05D002553 ORTHO05D002767 4.2e-21 107.1 117 46.2
Gorai.013G123700 Gossypium raimondii HOM05D002553 ORTHO05D002767 4.2e-21 107.1 117 47.0
AT3G05190 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 5.5e-21 106.7 121 47.1
AUR62005107 Chenopodium quinoa HOM05D002553 ORTHO05D002767 5.5e-21 106.7 109 49.5
Ciclev10003913m.g Citrus clementina HOM05D002553 ORTHO05D002767 5.5e-21 106.7 109 48.6
Pp3c16_17790 Physcomitrium patens HOM05D002553 ORTHO05D002767 5.5e-21 106.7 112 50.9
Nitab4.5_0004271g0010 Nicotiana tabacum HOM05D002553 ORTHO05D002767 7.2e-21 106.3 109 47.7
Nitab4.5_0006809g0010 Nicotiana tabacum HOM05D002553 ORTHO05D002767 7.2e-21 106.3 109 48.6
Gohir.D13G110400 Gossypium hirsutum HOM05D002553 ORTHO05D002767 9.4e-21 105.9 117 47.0
CAN.G1134.23 Capsicum annuum HOM05D002553 ORTHO05D002767 1.2e-20 105.5 117 47.0
Pp3c6_5420 Physcomitrium patens HOM05D002553 ORTHO05D002767 2.1e-20 104.8 112 50.0
Peaxi162Scf00434g00216 Petunia axillaris HOM05D002553 ORTHO05D002767 2.7e-20 104.4 130 45.4
Sabra05G0037500 Salix brachista HOM05D002553 ORTHO05D002767 1.4e-19 102.1 123 43.9
AagrBONN_evm.TU.Sc2ySwM_344.2814 Anthoceros agrestis HOM05D002553 ORTHO05D002767 4.0e-19 100.5 103 51.5
HPP92_001339 Vanilla planifolia HOM05D002553 ORTHO05D002767 6.7e-19 99.8 77 61.0
Migut.N01859 Erythranthe guttata HOM05D002553 ORTHO05D002767 2.0e-18 98.2 77 58.4
arahy.Tifrunner.gnm1.ann1.0VD1AP Arachis hypogaea HOM05D002553 ORTHO05D002767 2.6e-18 97.8 109 48.6
FAN02G2444 Fragaria x ananassa HOM05D002553 ORTHO05D002767 4.4e-18 97.1 77 57.1
Cre10.g458050 Chlamydomonas reinhardtii HOM05D002553 ORTHO05D002767 6.3e-17 93.2 97 47.4
BcaB04g21368 Brassica carinata HOM05D002553 ORTHO05D002767 5.3e-16 90.1 103 46.6
arahy.Tifrunner.gnm1.ann1.7PL8A0 Arachis hypogaea HOM05D002553 ORTHO05D002767 1.3e-14 85.5 109 43.1
MD12G1223700 Malus domestica HOM05D002553 ORTHO05D002767 5.0e-14 83.6 147 33.3
DCAR_003314 Daucus carota HOM05D002553 ORTHO05D002767 6.5e-14 83.2 83 50.6
VMungo0251G1212 Vigna mungo HOM05D002553 ORTHO05D011906 6.5e-14 83.2 118 39.8
CDE05G0789 Ceratophyllum demersum HOM05D002553 ORTHO05D002767 8.5e-14 82.8 89 50.6
FAN05G4192 Fragaria x ananassa HOM05D002553 ORTHO05D002767 2.5e-13 81.3 98 43.9
FAN05G5165 Fragaria x ananassa HOM05D002553 ORTHO05D002767 2.5e-13 81.3 98 43.9
Os03g0359100 Oryza sativa ssp. japonica HOM05D002553 ORTHO05D002767 2.5e-13 81.3 53 69.8
TPR.G3085 Trifolium pratense HOM05D002553 ORTHO05D002767 4.2e-13 80.5 53 67.9
EL10Ac4g09309 Beta vulgaris HOM05D002553 ORTHO05D002767 1.2e-12 79.0 108 42.6
Oeu013073.1 Olea europaea HOM05D002553 ORTHO05D002767 8.3e-09 66.2 53 56.6


User provided reference genes

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