Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g26038 Chara braunii HOM05D005422 ORTHO05D006578 0.0e+00 1552.7 933 100.0
SEGI_15215 Sequoiadendron giganteum HOM05D005422 ORTHO05D006578 6.0e-111 406.4 773 34.4
SEGI_16764 Sequoiadendron giganteum HOM05D005422 ORTHO05D006578 3.0e-110 404.1 771 34.2
SEGI_31313 Sequoiadendron giganteum HOM05D005422 ORTHO05D006578 3.0e-110 404.1 771 34.2
Pp3c10_15960 Physcomitrium patens HOM05D005422 ORTHO05D006578 8.7e-110 402.5 751 35.0
Mapoly0035s0099 Marchantia polymorpha HOM05D005422 ORTHO05D006578 6.3e-108 396.4 762 34.3
SMO164G0100 Selaginella moellendorffii HOM05D005422 ORTHO05D006578 7.7e-98 362.8 718 33.6
AagrBONN_evm.TU.Sc2ySwM_228.1647 Anthoceros agrestis HOM05D005422 ORTHO05D006578 1.1e-96 359.0 562 38.6
ATR0743G050 Amborella trichopoda HOM05D005422 ORTHO05D006578 1.1e-93 349.0 749 30.3
Prupe.1G233700 Prunus persica HOM05D005422 ORTHO05D006578 6.3e-92 343.2 749 32.0
FvH4_4g24380 Fragaria vesca HOM05D005422 ORTHO05D006578 3.4e-90 337.4 760 31.4
Nn3g16548 Nelumbo nucifera HOM05D005422 ORTHO05D006578 3.4e-90 337.4 749 31.2
MD13G1111800 Malus domestica HOM05D005422 ORTHO05D006578 2.5e-88 331.3 752 30.5
RcHm_v2.0_Chr4g0431221 Rosa chinensis HOM05D005422 ORTHO05D006578 2.7e-87 327.8 755 30.7
Sed0011369 Sechium edule HOM05D005422 ORTHO05D006578 3.6e-87 327.4 764 30.6
TAR374G0226 Trochodendron aralioides HOM05D005422 ORTHO05D006578 6.1e-87 326.6 752 30.6
QL03p054803 Quercus lobata HOM05D005422 ORTHO05D006578 1.1e-85 322.4 756 30.0
Ciclev10030973m.g Citrus clementina HOM05D005422 ORTHO05D006578 2.0e-85 321.6 752 30.1
MELO3C002044.2 Cucumis melo HOM05D005422 ORTHO05D006578 2.0e-85 321.6 758 30.7
Thhalv10018287m.g Eutrema salsugineum HOM05D005422 ORTHO05D006578 2.0e-85 321.6 763 29.5
THA.LOC104807895 Tarenaya hassleriana HOM05D005422 ORTHO05D006578 3.3e-85 320.9 754 30.4
Gorai.009G333700 Gossypium raimondii HOM05D005422 ORTHO05D006578 1.7e-84 318.5 757 30.4
Sc11g0000670 Simmondsia chinensis HOM05D005422 ORTHO05D006578 1.7e-84 318.5 754 30.8
Manes.12G015200 Manihot esculenta HOM05D005422 ORTHO05D006578 2.8e-84 317.8 716 32.0
Potri.010G055900 Populus trichocarpa HOM05D005422 ORTHO05D006578 2.8e-84 317.8 757 31.2
Thecc.02G273900 Theobroma cacao HOM05D005422 ORTHO05D006578 2.8e-84 317.8 758 30.6
Gohir.D05G312350 Gossypium hirsutum HOM05D005422 ORTHO05D006578 6.3e-84 316.6 757 30.3
arahy.Tifrunner.gnm1.ann1.3L5TD6 Arachis hypogaea HOM05D005422 ORTHO05D006578 1.4e-83 315.5 754 29.2
Cpa.g.sc43.8 Carica papaya HOM05D005422 ORTHO05D006578 1.8e-83 315.1 753 30.8
COL.COLO4_23617 Corchorus olitorius HOM05D005422 ORTHO05D006578 2.4e-83 314.7 742 30.9
arahy.Tifrunner.gnm1.ann1.FGLE2H Arachis hypogaea HOM05D005422 ORTHO05D006578 3.1e-83 314.3 759 29.5
ClCG04G011650 Citrullus lanatus HOM05D005422 ORTHO05D006578 3.1e-83 314.3 784 30.5
CsaV3_1G006150 Cucumis sativus L. HOM05D005422 ORTHO05D006578 3.1e-83 314.3 758 30.3
Eucgr.B03458 Eucalyptus grandis HOM05D005422 ORTHO05D006578 3.1e-83 314.3 717 30.7
GSVIVG01010354001 Vitis vinifera HOM05D005422 ORTHO05D006578 5.3e-83 313.5 752 30.7
Cfa009312 Carpinus fangiana HOM05D005422 ORTHO05D006578 1.6e-82 312.0 761 30.6
Aqoxy5G03525 Aquilegia oxysepala HOM05D005422 ORTHO05D006578 4.5e-82 310.5 753 30.7
PGR102G2427 Punica granatum HOM05D005422 ORTHO05D006578 1.0e-81 309.3 755 29.3
Carub.0002s1397 Capsella rubella HOM05D005422 ORTHO05D006578 1.3e-81 308.9 755 30.5
Ca_16485_v3 Cicer arietinum L. HOM05D005422 ORTHO05D006578 1.7e-81 308.5 757 30.4
Medtr3g085750 Medicago truncatula HOM05D005422 ORTHO05D006578 1.7e-81 308.5 749 29.8
Lalb_Chr04g0262801 Lupinus albus HOM05D005422 ORTHO05D006578 2.2e-81 308.1 749 29.9
Phvul.001G259300 Phaseolus vulgaris HOM05D005422 ORTHO05D006578 2.9e-81 307.8 756 29.1
PSO063G3748 Papaver somniferum HOM05D005422 ORTHO05D006578 1.1e-80 305.8 762 29.9
AT1G67630 Arabidopsis thaliana HOM05D005422 ORTHO05D006578 2.5e-80 304.7 755 30.1
C02p23270 Brassica napus HOM05D005422 ORTHO05D006578 2.5e-80 304.7 763 29.2
BraA02t06501Z Brassica rapa HOM05D005422 ORTHO05D006578 3.2e-80 304.3 763 29.1
CiPaw.06G099500 Carya illinoinensis HOM05D005422 ORTHO05D006578 7.2e-80 303.1 752 29.1
Glyma.18G009300 Glycine max HOM05D005422 ORTHO05D006578 1.2e-79 302.4 752 30.2
VMungo1383G2526 Vigna mungo HOM05D005422 ORTHO05D006578 1.2e-79 302.4 752 29.7
Duzib251G0558 Durio zibethinus HOM05D005422 ORTHO05D006578 1.6e-79 302.0 479 37.0
Sabra10G0049200 Salix brachista HOM05D005422 ORTHO05D006578 1.6e-79 302.0 750 30.4
AL2G26300 Arabidopsis lyrata HOM05D005422 ORTHO05D006578 2.1e-79 301.6 762 30.4
Duzib268G1013 Durio zibethinus HOM05D005422 ORTHO05D006578 2.1e-79 301.6 484 37.0
BcaC03g14856 Brassica carinata HOM05D005422 ORTHO05D006578 2.7e-79 301.2 765 29.0
BolC2t08466H Brassica oleracea HOM05D005422 ORTHO05D006578 4.7e-79 300.4 763 29.1
TPR.G22445 Trifolium pratense HOM05D005422 ORTHO05D006578 4.7e-79 300.4 754 29.8
BcaB05g24303 Brassica carinata HOM05D005422 ORTHO05D006578 6.1e-79 300.1 757 28.5
A02p14390 Brassica napus HOM05D005422 ORTHO05D006578 6.1e-79 300.1 758 29.9
Psat5g094440 Pisum sativum HOM05D005422 ORTHO05D006578 3.0e-78 297.7 755 29.5
CARHR060210 Cardamine hirsuta HOM05D005422 ORTHO05D006578 6.7e-78 296.6 498 35.5
Atru.chr11.2241 Acer truncatum HOM05D005422 ORTHO05D006578 1.2e-77 295.8 760 29.7
MSTRG.7977 Avicennia marina HOM05D005422 ORTHO05D006578 2.0e-77 295.0 753 28.7
Hund25438 Selenicereus undatus HOM05D005422 ORTHO05D006578 4.4e-77 293.9 786 30.0
CSS0029300 Camellia sinensis var. sinensis HOM05D005422 ORTHO05D006578 5.7e-77 293.5 494 37.0
MBI18_g30536_MAGBIO Magnolia biondii HOM05D005422 ORTHO05D006578 5.7e-77 293.5 519 35.6
Atru.chr11.2256 Acer truncatum HOM05D005422 ORTHO05D006578 7.5e-77 293.1 758 29.4
CSS0043806 Camellia sinensis var. sinensis HOM05D005422 ORTHO05D006578 7.5e-77 293.1 494 37.0
Solyc05g014540.3 Solanum lycopersicum HOM05D005422 ORTHO05D006578 1.7e-76 292.0 560 32.5
Sp5g22630 Schrenkiella parvula HOM05D005422 ORTHO05D006578 2.2e-76 291.6 499 35.7
HPP92_024298 Vanilla planifolia HOM05D005422 ORTHO05D006578 3.7e-76 290.8 476 33.8
Sopen05g009590 Solanum pennellii HOM05D005422 ORTHO05D006578 4.8e-76 290.4 559 32.0
PGSC0003DMG400017439 Solanum tuberosum HOM05D005422 ORTHO05D006578 8.2e-76 289.7 560 31.8
Lj6g0021706 Lotus japonicus HOM05D005422 ORTHO05D006578 1.1e-75 289.3 762 28.3
Zm00001eb409930 Zea mays HOM05D005422 ORTHO05D006578 1.4e-75 288.9 479 35.1
FAN22G2139 Fragaria x ananassa HOM05D005422 ORTHO05D000550 1.8e-75 288.5 760 29.3
EL10Ac6g13434 Beta vulgaris HOM05D005422 ORTHO05D006578 2.4e-75 288.1 766 29.0
PSO782G4908 Papaver somniferum HOM05D005422 ORTHO05D006578 2.7e-74 284.6 503 34.0
FAN07G0746 Fragaria x ananassa HOM05D005422 ORTHO05D000550 1.7e-73 282.0 755 29.0
Lj6g0001538 Lotus japonicus HOM05D005422 ORTHO05D006578 5.0e-73 280.4 768 28.5
MD16G1111400 Malus domestica HOM05D005422 ORTHO05D006578 2.5e-72 278.1 496 34.7
Os12g0242900 Oryza sativa ssp. japonica HOM05D005422 ORTHO05D006578 2.5e-72 278.1 466 35.2
Aa31LG4G12020 Aethionema arabicum HOM05D005422 ORTHO05D006578 3.2e-72 277.7 531 33.7
AUR62005568 Chenopodium quinoa HOM05D005422 ORTHO05D006578 4.2e-72 277.3 779 28.9
FAN12G3101 Fragaria x ananassa HOM05D005422 ORTHO05D006578 7.2e-72 276.6 891 27.3
Haze_12366 Corylus avellana HOM05D005422 ORTHO05D006578 1.6e-71 275.4 757 28.1
Oeu056686.1 Olea europaea HOM05D005422 ORTHO05D006578 3.6e-71 274.2 560 33.2
HanXRQChr06g0174981 Helianthus annuus HOM05D005422 ORTHO05D006578 8.0e-71 273.1 565 30.3
Peaxi162Scf00128g00843 Petunia axillaris HOM05D005422 ORTHO05D006578 1.8e-70 271.9 561 31.4
Migut.K00694 Erythranthe guttata HOM05D005422 ORTHO05D006578 4.0e-70 270.8 478 34.5
AUR62024162 Chenopodium quinoa HOM05D005422 ORTHO05D006578 6.8e-70 270.0 762 28.5
CAN.G163.4 Capsicum annuum HOM05D005422 ORTHO05D006578 1.5e-69 268.9 561 31.2
ECA246G0814 Erigeron canadensis HOM05D005422 ORTHO05D006578 3.4e-69 267.7 494 33.2
FAN17G0355 Fragaria x ananassa HOM05D005422 ORTHO05D006578 1.3e-68 265.8 758 27.8
vmacro16136 Vaccinium macrocarpon HOM05D005422 ORTHO05D006578 1.7e-68 265.4 706 29.7
SGA_v2.0_scaffold46G17410 Striga asiatica HOM05D005422 ORTHO05D006578 2.8e-68 264.6 478 33.7
Actinidia33261 Actinidia chinensis HOM05D005422 ORTHO05D006578 4.1e-67 260.8 572 32.3
DCAR_024084 Daucus carota HOM05D005422 ORTHO05D006578 1.6e-66 258.8 511 33.9
CDE09G1061 Ceratophyllum demersum HOM05D005422 ORTHO05D006578 2.7e-66 258.1 495 33.5
Dinv14796 Davidia involucrata HOM05D005422 ORTHO05D006578 1.3e-65 255.8 453 35.3
CANSAT01G0865 Cannabis sativa HOM05D005422 ORTHO05D006578 1.7e-65 255.4 672 28.9
MCO02G188 Micromonas commoda HOM05D005422 ORTHO05D006578 3.6e-63 247.7 798 28.6
Lsat_1_v5_gn_3_29520 Lactuca sativa HOM05D005422 ORTHO05D006578 1.8e-62 245.4 493 31.6
Hma1.2p1_1340F.1_g276720 Hydrangea macrophylla HOM05D005422 ORTHO05D006578 1.5e-61 242.3 564 30.7
Cc11_g16560 Coffea canephora HOM05D005422 ORTHO05D006578 3.4e-61 241.1 558 30.1
Nitab4.5_0000240g0030 Nicotiana tabacum HOM05D005422 ORTHO05D006578 7.5e-61 240.0 561 29.4
SHI17936 Sapria himalayana HOM05D005422 ORTHO05D006578 2.8e-60 238.0 591 32.3
Rhsim12G0105700 Rhododendron simsii HOM05D005422 ORTHO05D006578 1.1e-59 236.1 764 27.5
Lj6C821T7 Lonicera japonica HOM05D005422 ORTHO05D006578 1.8e-59 235.3 571 29.8
SMO076G0002 Selaginella moellendorffii HOM05D005422 ORTHO05D006578 1.3e-57 229.2 214 53.7
HPP92_024300 Vanilla planifolia HOM05D005422 ORTHO05D006578 4.9e-52 210.7 750 23.7
CSS0043308 Camellia sinensis var. sinensis HOM05D005422 ORTHO05D006578 6.4e-52 210.3 214 50.0
Glyma.11G247900 Glycine max HOM05D005422 ORTHO05D006578 1.1e-51 209.5 658 27.4
unitig_749.g13303 Utricularia gibba HOM05D005422 ORTHO05D006578 4.1e-51 207.6 480 30.4
PRCOL_00001924 Prasinoderma coloniale HOM05D005422 ORTHO05D006578 1.6e-50 205.7 493 30.0
CSS0016009 Camellia sinensis var. sinensis HOM05D005422 ORTHO05D006578 2.7e-50 204.9 245 44.9
Gohir.A05G311350 Gossypium hirsutum HOM05D005422 ORTHO05D006578 2.7e-50 204.9 757 25.2
DCAR_013710 Daucus carota HOM05D005422 ORTHO05D006578 3.3e-40 171.4 179 48.6
Nitab4.5_0000581g0110 Nicotiana tabacum HOM05D005422 ORTHO05D006578 1.6e-39 169.1 517 25.7
Cre01.g017450 Chlamydomonas reinhardtii HOM05D005422 ORTHO05D006578 4.9e-36 157.5 221 38.9
CSS0044941 Camellia sinensis var. sinensis HOM05D005422 ORTHO05D006578 2.9e-28 131.7 127 50.4
arahy.Tifrunner.gnm1.ann1.PQ2R0I Arachis hypogaea HOM05D005422 ORTHO05D006578 2.1e-23 115.5 124 46.0
unitig_35.g30205 Utricularia gibba HOM05D005422 ORTHO05D006578 2.1e-23 115.5 383 25.8
CARHR058070 Cardamine hirsuta HOM05D005422 ORTHO05D006578 2.6e-21 108.6 273 29.3
Lsat_1_v5_gn_5_63620 Lactuca sativa HOM05D005422 ORTHO05D006040 2.9e-20 105.1 94 50.0
Cfa024010 Carpinus fangiana HOM05D003649 ORTHO05D004498 9.3e-19 100.1 262 27.5
Lsat_1_v5_gn_5_146881 Lactuca sativa HOM05D005422 ORTHO05D019256 2.7e-10 72.0 60 48.3
Lsat_1_v5_gn_8_120961 Lactuca sativa HOM05D005422 ORTHO05D006578 3.3e-08 65.1 101 38.6
Lsat_1_v5_gn_2_95100 Lactuca sativa HOM05D005290 ORTHO05D006040 2.1e-07 62.4 95 37.9
arahy.Tifrunner.gnm1.ann1.L1WA2E Arachis hypogaea HOM05D001562 ORTHO05D001437 1.8e-06 59.3 42 57.1
FvH4_4g24360 Fragaria vesca HOM05D005422 ORTHO05D006578 2.4e-06 58.9 54 50.0


User provided reference genes

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