Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 1.9e-139 499.2 253 100.0
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 1.2e-48 197.6 157 61.8
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 2.0e-45 186.8 141 61.7
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 2.9e-44 183.0 133 65.4
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 1.1e-43 181.0 136 64.0
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 1.5e-43 180.6 136 62.5
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.5e-43 180.6 137 60.6
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 1.9e-43 180.3 129 66.7
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 2.5e-43 179.9 137 60.6
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 2.5e-43 179.9 136 63.2
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 2.5e-43 179.9 122 66.4
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 3.3e-43 179.5 137 62.0
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 4.3e-43 179.1 128 63.3
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 4.3e-43 179.1 136 61.0
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 5.6e-43 178.7 126 66.7
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 9.5e-43 177.9 126 66.7
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.2e-42 177.6 135 61.5
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 1.2e-42 177.6 122 68.0
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 1.6e-42 177.2 136 61.8
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 2.1e-42 176.8 128 62.5
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 2.1e-42 176.8 137 63.5
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 2.1e-42 176.8 122 65.6
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 2.1e-42 176.8 122 65.6
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 2.1e-42 176.8 122 65.6
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 2.1e-42 176.8 123 65.9
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 2.1e-42 176.8 133 61.7
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 2.1e-42 176.8 135 60.7
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 2.1e-42 176.8 126 66.7
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 2.1e-42 176.8 126 66.7
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 2.1e-42 176.8 122 67.2
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 2.8e-42 176.4 125 66.4
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.8e-42 176.4 126 65.1
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 3.6e-42 176.0 115 70.4
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 3.6e-42 176.0 122 67.2
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 3.6e-42 176.0 122 67.2
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 4.7e-42 175.6 128 63.3
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 4.7e-42 175.6 125 64.8
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 4.7e-42 175.6 125 64.8
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 4.7e-42 175.6 129 62.8
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 4.7e-42 175.6 136 62.5
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 6.1e-42 175.3 122 67.2
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 6.1e-42 175.3 133 61.7
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 8.0e-42 174.9 125 64.0
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 8.0e-42 174.9 136 58.8
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 8.0e-42 174.9 228 43.9
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 1.0e-41 174.5 125 65.6
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 1.4e-41 174.1 137 59.1
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 1.4e-41 174.1 133 61.7
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 1.4e-41 174.1 134 63.4
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 1.4e-41 174.1 122 65.6
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 1.4e-41 174.1 136 61.0
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 1.4e-41 174.1 136 61.0
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 1.8e-41 173.7 133 61.7
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 1.8e-41 173.7 136 58.1
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 2.3e-41 173.3 128 61.7
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 2.3e-41 173.3 133 60.9
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 2.3e-41 173.3 122 65.6
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 3.0e-41 172.9 132 62.1
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 3.0e-41 172.9 128 64.1
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 4.0e-41 172.6 126 63.5
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 4.0e-41 172.6 126 63.5
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 4.0e-41 172.6 133 59.4
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 4.0e-41 172.6 127 63.0
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 4.0e-41 172.6 127 63.0
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 4.0e-41 172.6 127 63.0
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 5.2e-41 172.2 128 62.5
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 5.2e-41 172.2 114 67.5
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 5.2e-41 172.2 136 60.3
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 6.8e-41 171.8 126 63.5
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 6.8e-41 171.8 126 62.7
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 6.8e-41 171.8 122 64.8
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 1.2e-40 171.0 129 62.0
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 1.2e-40 171.0 126 62.7
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 1.2e-40 171.0 126 61.9
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 1.2e-40 171.0 122 63.9
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 1.2e-40 171.0 122 63.1
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 1.5e-40 170.6 129 62.8
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 1.5e-40 170.6 133 58.6
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 1.5e-40 170.6 129 59.7
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 2.6e-40 169.9 126 62.7
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 2.6e-40 169.9 122 62.3
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 2.6e-40 169.9 133 60.2
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 3.4e-40 169.5 122 62.3
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 5.8e-40 168.7 126 61.1
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 5.8e-40 168.7 126 61.9
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 5.8e-40 168.7 133 58.6
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 5.8e-40 168.7 122 61.5
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 5.8e-40 168.7 122 61.5
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 5.8e-40 168.7 122 61.5
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 5.8e-40 168.7 122 61.5
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 5.8e-40 168.7 121 64.5
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 5.8e-40 168.7 136 57.4
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 5.8e-40 168.7 149 56.4
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 7.5e-40 168.3 152 55.9
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 1.3e-39 167.5 134 58.2
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 3.7e-39 166.0 122 62.3
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 3.7e-39 166.0 122 62.3
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 6.4e-39 165.2 129 60.5
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 9.2e-38 161.4 138 58.7
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 9.5e-35 151.4 161 50.3
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 9.8e-32 141.4 122 56.6
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.3e-28 131.0 101 59.4
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 5.2e-25 119.0 87 63.2
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 7.5e-24 115.2 86 64.0
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 3.3e-19 99.8 101 45.5
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 1.6e-18 97.4 75 58.7
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 5.2e-17 92.4 132 42.4
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 4.4e-16 89.4 66 65.2
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 6.6e-12 75.5 63 54.0
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 2.2e-07 60.5 34 76.5


User provided reference genes

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