Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g24397 Chara braunii HOM05D005921 ORTHO05D132278 0.0e+00 1222.2 781 100.0
Cfa018279 Carpinus fangiana HOM05D005921 ORTHO05D007374 2.8e-08 65.1 83 33.7
QL02p037460 Quercus lobata HOM05D005921 ORTHO05D007374 1.1e-07 63.2 78 34.6
SEGI_33860 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 1.4e-07 62.8 83 34.9
QL02p037958 Quercus lobata HOM05D005921 ORTHO05D007374 1.8e-07 62.4 78 34.6
Aa31LG4G8950 Aethionema arabicum HOM05D005921 ORTHO05D007374 2.3e-07 62.0 84 33.3
arahy.Tifrunner.gnm1.ann1.9JVG50 Arachis hypogaea HOM05D005921 ORTHO05D007374 4.0e-07 61.2 83 31.3
arahy.Tifrunner.gnm1.ann1.TV90AE Arachis hypogaea HOM05D005921 ORTHO05D007374 4.0e-07 61.2 83 31.3
Glyma.20G170200 Glycine max HOM05D005921 ORTHO05D007374 4.0e-07 61.2 84 31.0
Lj5g0014499 Lotus japonicus HOM05D005921 ORTHO05D007374 4.0e-07 61.2 84 31.0
PSO675G2388 Papaver somniferum HOM05D005921 ORTHO05D007374 4.0e-07 61.2 83 32.5
VMungo0720G0456 Vigna mungo HOM05D005921 ORTHO05D007374 4.0e-07 61.2 84 32.1
CsaV3_6G004990 Cucumis sativus L. HOM05D005921 ORTHO05D007374 5.2e-07 60.8 83 33.7
Medtr1g097955 Medicago truncatula HOM05D005921 ORTHO05D007374 5.2e-07 60.8 83 31.3
CiPaw.15G012300 Carya illinoinensis HOM05D005921 ORTHO05D007374 6.8e-07 60.5 83 30.1
Hma1.2p1_0358F.1_g134830 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 6.8e-07 60.5 83 31.3
Hma1.2p1_0358F.1_g134840 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 6.8e-07 60.5 83 31.3
Lsat_1_v5_gn_1_5181 Lactuca sativa HOM05D005921 ORTHO05D007374 6.8e-07 60.5 83 32.5
Ca_10662_v3 Cicer arietinum L. HOM05D005921 ORTHO05D007374 8.9e-07 60.1 97 28.9
Psat0s899g0040 Pisum sativum HOM05D005921 ORTHO05D007374 8.9e-07 60.1 83 31.3
TPR.G17011 Trifolium pratense HOM05D005921 ORTHO05D007374 8.9e-07 60.1 83 30.1
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 1.2e-06 59.7 83 32.5
Lalb_Chr02g0141581 Lupinus albus HOM05D005921 ORTHO05D007374 1.2e-06 59.7 83 30.1
Rhsim11G0087800 Rhododendron simsii HOM05D005921 ORTHO05D007374 1.2e-06 59.7 80 32.5
Solyc04g072010.3 Solanum lycopersicum HOM05D005921 ORTHO05D007374 1.2e-06 59.7 83 31.3
Mapoly0096s0032 Marchantia polymorpha HOM05D005921 ORTHO05D007374 1.5e-06 59.3 84 33.3
Sopen04g027990 Solanum pennellii HOM05D005921 ORTHO05D007374 1.5e-06 59.3 83 31.3
TAR381G0629 Trochodendron aralioides HOM05D005921 ORTHO05D007374 1.5e-06 59.3 83 30.1
GSVIVG01001409001 Vitis vinifera HOM05D005921 ORTHO05D007374 1.5e-06 59.3 83 30.1
MD05G1033700 Malus domestica HOM05D005921 ORTHO05D007374 2.0e-06 58.9 83 30.1
MCO15G195 Micromonas commoda HOM05D005921 ORTHO05D007374 2.0e-06 58.9 110 28.2
Eucgr.F04188 Eucalyptus grandis HOM05D005921 ORTHO05D007374 3.4e-06 58.2 83 30.1
MBI01_g34168_MAGBIO Magnolia biondii HOM05D005921 ORTHO05D007374 3.4e-06 58.2 100 36.0
Nn5g28835 Nelumbo nucifera HOM05D005921 ORTHO05D007374 3.4e-06 58.2 110 30.0
Potri.005G197000 Populus trichocarpa HOM05D005921 ORTHO05D007374 3.4e-06 58.2 94 28.7
Prupe.8G040700 Prunus persica HOM05D005921 ORTHO05D007374 3.4e-06 58.2 83 30.1
AT1G71696 Arabidopsis thaliana HOM05D005921 ORTHO05D007374 4.4e-06 57.8 84 31.0
Carub.0002s1845 Capsella rubella HOM05D005921 ORTHO05D007374 4.4e-06 57.8 84 31.0
Lj4A704G63 Lonicera japonica HOM05D005921 ORTHO05D007374 4.4e-06 57.8 80 31.2
Glyma.10G221400 Glycine max HOM05D005921 ORTHO05D007374 5.8e-06 57.4 84 28.6
HanXRQChr02g0042431 Helianthus annuus HOM05D005921 ORTHO05D007374 5.8e-06 57.4 83 31.3
HPP92_000681 Vanilla planifolia HOM05D005921 ORTHO05D007374 5.8e-06 57.4 100 33.0
AL2G31250 Arabidopsis lyrata HOM05D005921 ORTHO05D007374 7.5e-06 57.0 81 32.1
CSS0006668 Camellia sinensis var. sinensis HOM05D005921 ORTHO05D007374 7.5e-06 57.0 83 28.9
ClCG08G007340 Citrullus lanatus HOM05D005921 ORTHO05D007374 7.5e-06 57.0 102 30.4
Lalb_Chr06g0161731 Lupinus albus HOM05D005921 ORTHO05D007374 7.5e-06 57.0 83 28.9
Sp5g26720 Schrenkiella parvula HOM05D005921 ORTHO05D007374 7.5e-06 57.0 81 32.1
Thhalv10018610m.g Eutrema salsugineum HOM05D005921 ORTHO05D007374 9.8e-06 56.6 81 32.1
Hund26678 Selenicereus undatus HOM05D005921 ORTHO05D007374 9.8e-06 56.6 83 30.1


User provided reference genes

Program Settings