Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g24285 Chara braunii HOM05D002419 ORTHO05D005441 1.2e-103 379.8 183 100.0
PGR119G1746 Punica granatum HOM05D002419 ORTHO05D005441 6.0e-63 244.6 175 64.0
QL01p037218 Quercus lobata HOM05D002419 ORTHO05D005441 1.0e-62 243.8 164 67.7
MSTRG.21143 Avicennia marina HOM05D002419 ORTHO05D005441 3.0e-62 242.3 164 65.9
Lsat_1_v5_gn_6_26220 Lactuca sativa HOM05D002419 ORTHO05D005441 3.0e-62 242.3 175 63.4
BcaB01g04654 Brassica carinata HOM05D002419 ORTHO05D005441 5.0e-62 241.5 171 64.9
Nitab4.5_0002129g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 5.0e-62 241.5 176 64.2
GSVIVG01025135001 Vitis vinifera HOM05D002419 ORTHO05D005441 5.0e-62 241.5 160 68.8
Os07g0412400 Oryza sativa ssp. japonica HOM05D002419 ORTHO05D005441 6.6e-62 241.1 180 63.3
SalBow3G4510 Salvia bowleyana HOM05D002419 ORTHO05D005441 6.6e-62 241.1 160 66.9
Ciclev10029381m.g Citrus clementina HOM05D002419 ORTHO05D005441 8.6e-62 240.7 160 67.5
Migut.D02183 Erythranthe guttata HOM05D002419 ORTHO05D005441 8.6e-62 240.7 160 66.9
CSS0025233 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D005441 1.1e-61 240.4 166 65.7
arahy.Tifrunner.gnm1.ann1.0PI3PU Arachis hypogaea HOM05D002419 ORTHO05D005441 1.9e-61 239.6 166 66.9
arahy.Tifrunner.gnm1.ann1.LS5S44 Arachis hypogaea HOM05D002419 ORTHO05D005441 1.9e-61 239.6 166 66.9
arahy.Tifrunner.gnm1.ann1.P2RDRN Arachis hypogaea HOM05D002419 ORTHO05D005441 1.9e-61 239.6 166 66.9
Thecc.01G220900 Theobroma cacao HOM05D002419 ORTHO05D005441 1.9e-61 239.6 160 68.8
Cfa010014 Carpinus fangiana HOM05D002419 ORTHO05D005441 2.5e-61 239.2 172 65.1
ECA233G1138 Erigeron canadensis HOM05D002419 ORTHO05D005441 2.5e-61 239.2 166 65.1
TAR623G1637 Trochodendron aralioides HOM05D002419 ORTHO05D005441 2.5e-61 239.2 160 68.8
Gohir.A08G047300 Gossypium hirsutum HOM05D002419 ORTHO05D005441 3.3e-61 238.8 160 68.1
AagrBONN_evm.TU.Sc2ySwM_344.3388 Anthoceros agrestis HOM05D002419 ORTHO05D005441 4.3e-61 238.4 160 68.1
ClCG02G020950 Citrullus lanatus HOM05D002419 ORTHO05D005441 4.3e-61 238.4 172 64.0
HanXRQChr13g0401511 Helianthus annuus HOM05D002419 ORTHO05D005441 4.3e-61 238.4 166 66.3
Ca_01433_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 5.6e-61 238.0 170 65.3
Manes.04G024900 Manihot esculenta HOM05D002419 ORTHO05D005441 5.6e-61 238.0 166 64.5
PSO541G3116 Papaver somniferum HOM05D002419 ORTHO05D005441 5.6e-61 238.0 160 67.5
PSO675G4527 Papaver somniferum HOM05D002419 ORTHO05D005441 5.6e-61 238.0 160 67.5
Peaxi162Scf00389g00950 Petunia axillaris HOM05D002419 ORTHO05D005441 5.6e-61 238.0 164 64.0
Pp3c13_9300 Physcomitrium patens HOM05D002419 ORTHO05D005441 5.6e-61 238.0 164 66.5
Atru.chr3.3690 Acer truncatum HOM05D002419 ORTHO05D005441 7.3e-61 237.7 160 67.5
Cpa.g.sc8.318 Carica papaya HOM05D002419 ORTHO05D005441 7.3e-61 237.7 162 65.4
Sp6g21950 Schrenkiella parvula HOM05D002419 ORTHO05D005441 7.3e-61 237.7 172 65.1
MD10G1078500 Malus domestica HOM05D002419 ORTHO05D005441 9.5e-61 237.3 160 67.5
Ca_11594_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 1.2e-60 236.9 170 64.7
Gorai.004G058900 Gossypium raimondii HOM05D002419 ORTHO05D005441 1.2e-60 236.9 160 66.9
ATR0564G250 Amborella trichopoda HOM05D002419 ORTHO05D005441 1.6e-60 236.5 165 65.5
Aqoxy5G03165 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 1.6e-60 236.5 160 68.1
Carub.0003s2777 Capsella rubella HOM05D002419 ORTHO05D005441 1.6e-60 236.5 175 62.3
CiPaw.13G107100 Carya illinoinensis HOM05D002419 ORTHO05D005441 1.6e-60 236.5 171 66.1
Prupe.1G205700 Prunus persica HOM05D002419 ORTHO05D005441 1.6e-60 236.5 160 68.1
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 1.6e-60 236.5 167 64.7
Solyc11g072410.2 Solanum lycopersicum HOM05D002419 ORTHO05D005441 2.1e-60 236.1 162 64.8
Sopen11g030060 Solanum pennellii HOM05D002419 ORTHO05D005441 2.1e-60 236.1 162 64.8
EL10Ac5g12738 Beta vulgaris HOM05D002419 ORTHO05D005441 2.8e-60 235.7 170 62.4
COL.COLO4_15624 Corchorus olitorius HOM05D002419 ORTHO05D005441 2.8e-60 235.7 166 65.1
MELO3C025747.2 Cucumis melo HOM05D002419 ORTHO05D005441 3.6e-60 235.3 173 62.4
Gohir.D08G057700 Gossypium hirsutum HOM05D002419 ORTHO05D005441 3.6e-60 235.3 160 66.2
Prupe.8G100300 Prunus persica HOM05D002419 ORTHO05D005441 3.6e-60 235.3 160 67.5
PGSC0003DMG400027404 Solanum tuberosum HOM05D002419 ORTHO05D005441 3.6e-60 235.3 162 64.8
CDE02G0876 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 4.7e-60 235.0 170 61.2
Eucgr.J00952 Eucalyptus grandis HOM05D002419 ORTHO05D005441 4.7e-60 235.0 172 62.2
Potri.006G228500 Populus trichocarpa HOM05D002419 ORTHO05D005441 4.7e-60 235.0 163 64.4
Potri.012G109400 Populus trichocarpa HOM05D002419 ORTHO05D005441 4.7e-60 235.0 173 61.3
PSO339G1519 Papaver somniferum HOM05D002419 ORTHO05D005441 6.2e-60 234.6 162 66.7
AL8G36960 Arabidopsis lyrata HOM05D002419 ORTHO05D005441 8.1e-60 234.2 169 63.3
CANSAT54G0974 Cannabis sativa HOM05D002419 ORTHO05D005441 8.1e-60 234.2 172 64.0
CsaV3_6G021640 Cucumis sativus L. HOM05D002419 ORTHO05D005441 8.1e-60 234.2 159 66.0
DCAR_006045 Daucus carota HOM05D002419 ORTHO05D005441 8.1e-60 234.2 176 61.4
Rhsim08G0250900 Rhododendron simsii HOM05D002419 ORTHO05D005441 8.1e-60 234.2 166 62.7
Hma1.2p1_0958F.1_g241480 Hydrangea macrophylla HOM05D002419 ORTHO05D005441 1.1e-59 233.8 172 63.4
Phvul.004G086200 Phaseolus vulgaris HOM05D002419 ORTHO05D005441 1.1e-59 233.8 165 64.2
AUR62019559 Chenopodium quinoa HOM05D002419 ORTHO05D005441 1.4e-59 233.4 170 58.8
Glyma.02G076000 Glycine max HOM05D002419 ORTHO05D005441 1.4e-59 233.4 165 65.5
LjContig00564g0008442 Lotus japonicus HOM05D002419 ORTHO05D005441 1.4e-59 233.4 166 65.1
Glyma.16G158000 Glycine max HOM05D002419 ORTHO05D005441 1.8e-59 233.0 165 65.5
SMO367G1131 Selaginella moellendorffii HOM05D002419 ORTHO05D005441 1.8e-59 233.0 174 62.6
Hund28200 Selenicereus undatus HOM05D002419 ORTHO05D005441 1.8e-59 233.0 168 61.3
Hund28212 Selenicereus undatus HOM05D002419 ORTHO05D005441 1.8e-59 233.0 168 61.3
Duzib211G0640 Durio zibethinus HOM05D002419 ORTHO05D005441 2.3e-59 232.6 166 63.3
Thhalv10014819m.g Eutrema salsugineum HOM05D002419 ORTHO05D005441 2.3e-59 232.6 172 63.4
SEGI_39229 Sequoiadendron giganteum HOM05D002419 ORTHO05D005441 2.3e-59 232.6 164 66.5
CARHR274010 Cardamine hirsuta HOM05D002419 ORTHO05D005441 3.1e-59 232.3 166 63.9
Cc04_g16270 Coffea canephora HOM05D002419 ORTHO05D005441 3.1e-59 232.3 160 63.1
Medtr5g087910 Medicago truncatula HOM05D002419 ORTHO05D005441 3.1e-59 232.3 162 66.7
THA.LOC104799485 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 3.1e-59 232.3 173 63.6
Aqoxy5G00056 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 4.0e-59 231.9 160 66.9
CDE06G2731 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 4.0e-59 231.9 170 61.2
BcaC02g12517 Brassica carinata HOM05D002419 ORTHO05D005441 5.2e-59 231.5 168 63.1
MBI18_g31602_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D005441 5.2e-59 231.5 159 66.7
THA.LOC104814839 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 5.2e-59 231.5 173 63.0
Zm00001eb305840 Zea mays HOM05D002419 ORTHO05D005441 5.2e-59 231.5 161 64.0
BcaC04g19694 Brassica carinata HOM05D002419 ORTHO05D005441 6.8e-59 231.1 178 61.2
Dinv32788 Davidia involucrata HOM05D002419 ORTHO05D005441 6.8e-59 231.1 160 65.6
Duzib138G1011 Durio zibethinus HOM05D002419 ORTHO05D005441 6.8e-59 231.1 166 63.9
RcHm_v2.0_Chr7g0223211 Rosa chinensis HOM05D002419 ORTHO05D005441 1.2e-58 230.3 160 65.6
TPR.G1260 Trifolium pratense HOM05D002419 ORTHO05D005441 1.2e-58 230.3 166 64.5
BcaB08g36334 Brassica carinata HOM05D002419 ORTHO05D005441 1.5e-58 229.9 173 62.4
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 1.5e-58 229.9 178 61.8
VMungo0245G0001 Vigna mungo HOM05D002419 ORTHO05D005441 1.5e-58 229.9 165 63.0
C03p12900 Brassica napus HOM05D002419 ORTHO05D005441 2.0e-58 229.6 176 61.9
HPP92_005091 Vanilla planifolia HOM05D002419 ORTHO05D005441 2.0e-58 229.6 166 65.1
TWI31G0524 Tripterygium wilfordii HOM05D002419 ORTHO05D005441 2.6e-58 229.2 160 65.6
Ah.13g070120 Amaranthus hybridus HOM05D002419 ORTHO05D005441 3.4e-58 228.8 160 63.8
FvH4_5g29720 Fragaria vesca HOM05D002419 ORTHO05D005441 3.4e-58 228.8 160 64.4
FAN18G2638 Fragaria x ananassa HOM05D002419 ORTHO05D005441 3.4e-58 228.8 160 64.4
Lalb_Chr10g0105941 Lupinus albus HOM05D002419 ORTHO05D005441 3.4e-58 228.8 160 65.0
Psat2g022600 Pisum sativum HOM05D002419 ORTHO05D005441 3.4e-58 228.8 160 66.2
BolC4t26562H Brassica oleracea HOM05D002419 ORTHO05D005441 5.8e-58 228.0 176 60.8
Lj1g0007529 Lotus japonicus HOM05D002419 ORTHO05D005441 5.8e-58 228.0 168 63.7
Haze_23372 Corylus avellana HOM05D002419 ORTHO05D005441 7.5e-58 227.6 183 60.1
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 9.9e-58 227.3 154 66.2
Oeu037230.1 Olea europaea HOM05D002419 ORTHO05D005441 9.9e-58 227.3 161 63.4
Duzib211G0283 Durio zibethinus HOM05D002419 ORTHO05D005441 1.3e-57 226.9 166 62.7
FAN13G2429 Fragaria x ananassa HOM05D002419 ORTHO05D005441 1.3e-57 226.9 160 63.8
VMungo1080G0265 Vigna mungo HOM05D002419 ORTHO05D005441 1.3e-57 226.9 165 62.4
BraA03t10433Z Brassica rapa HOM05D002419 ORTHO05D005441 1.7e-57 226.5 172 62.2
SGA_v2.0_scaffold61G21167 Striga asiatica HOM05D002419 ORTHO05D005441 1.7e-57 226.5 160 63.1
TPR.G11323 Trifolium pratense HOM05D002419 ORTHO05D005441 1.7e-57 226.5 165 63.0
Sc06g0010580 Simmondsia chinensis HOM05D002419 ORTHO05D005441 2.2e-57 226.1 160 63.1
A03p11170 Brassica napus HOM05D002419 ORTHO05D005441 3.7e-57 225.3 173 61.3
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 4.9e-57 224.9 163 64.4
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 4.9e-57 224.9 163 64.4
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 6.4e-57 224.6 163 64.4
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 8.3e-57 224.2 163 64.4
FAN08G2817 Fragaria x ananassa HOM05D002419 ORTHO05D005441 1.4e-56 223.4 159 63.5
Mapoly0012s0053 Marchantia polymorpha HOM05D002419 ORTHO05D005441 1.9e-56 223.0 162 62.3
AT5G60340 Arabidopsis thaliana HOM05D002419 ORTHO05D005441 2.4e-56 222.6 172 58.7
FAN04G1346 Fragaria x ananassa HOM05D002419 ORTHO05D005441 3.2e-56 222.2 160 62.5
Rhsim01G0220200 Rhododendron simsii HOM05D002419 ORTHO05D005441 2.1e-55 219.5 201 52.2
AUR62037871 Chenopodium quinoa HOM05D002419 ORTHO05D005441 2.7e-55 219.2 151 62.3
CAN.G1839.8 Capsicum annuum HOM05D002419 ORTHO05D005441 3.5e-55 218.8 160 61.2
BcaC08g46529 Brassica carinata HOM05D002419 ORTHO05D005441 1.3e-54 216.9 176 59.1
Cre02.g081550 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D005441 6.6e-54 214.5 160 58.8
Oeu005909.2 Olea europaea HOM05D002419 ORTHO05D005441 8.6e-54 214.2 153 63.4
Peaxi162Scf00101g01011 Petunia axillaris HOM05D002419 ORTHO05D005441 1.9e-53 213.0 172 57.0
PRCOL_00000283 Prasinoderma coloniale HOM05D002419 ORTHO05D005441 9.5e-53 210.7 159 60.4
Nitab4.5_0000106g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 2.1e-52 209.5 160 58.8
vmacro14463 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 2.8e-52 209.1 233 47.2
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 3.6e-52 208.8 159 61.6
Sopen06g031710 Solanum pennellii HOM05D002419 ORTHO05D005441 2.0e-50 203.0 166 57.2
TAR369G1020 Trochodendron aralioides HOM05D002419 ORTHO05D005441 6.4e-49 198.0 163 62.0
PGSC0003DMG400007496 Solanum tuberosum HOM05D002419 ORTHO05D005441 3.2e-48 195.7 166 56.0
Haze_23913 Corylus avellana HOM05D002419 ORTHO05D005441 2.5e-45 186.0 167 54.5
SHI24546 Sapria himalayana HOM05D002419 ORTHO05D005441 7.3e-45 184.5 170 50.0
Nn1g08940 Nelumbo nucifera HOM05D002419 ORTHO05D005441 6.4e-41 171.4 115 68.7
Aqoxy6G01924 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 6.6e-38 161.4 106 70.8
Glyma.10G187200 Glycine max HOM05D002419 ORTHO05D005441 3.6e-36 155.6 119 61.3
AagrBONN_evm.TU.Sc2ySwM_228.4581 Anthoceros agrestis HOM05D002419 ORTHO05D005441 6.2e-36 154.8 104 69.2
MCO01G137 Micromonas commoda HOM05D002419 ORTHO05D005441 6.2e-36 154.8 169 45.0
Nitab4.5_0001802g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.1e-35 152.5 110 60.0
Solyc06g075310.4 Solanum lycopersicum HOM05D002419 ORTHO05D005441 2.6e-34 149.4 117 61.5
Nn5g28456 Nelumbo nucifera HOM05D002419 ORTHO05D005441 6.4e-33 144.8 103 66.0
CAN.G1001.14 Capsicum annuum HOM05D002419 ORTHO05D005441 2.7e-31 139.4 104 59.6
CAN.G1001.18 Capsicum annuum HOM05D002419 ORTHO05D005441 2.7e-31 139.4 104 59.6
CAN.G553.11 Capsicum annuum HOM05D002419 ORTHO05D005441 3.9e-30 135.6 92 65.2
Aa31LG4G12680 Aethionema arabicum HOM05D002419 ORTHO05D005441 2.5e-29 132.9 85 71.8
unitig_736.g22419 Utricularia gibba HOM05D002419 ORTHO05D005441 3.3e-29 132.5 164 42.7
CAN.G6400.1 Capsicum annuum HOM05D002419 ORTHO05D005441 7.4e-29 131.3 92 64.1
Dinv24670 Davidia involucrata HOM05D002419 ORTHO05D005441 1.4e-27 127.1 95 60.0
QL08p054546 Quercus lobata HOM05D002419 ORTHO05D005441 1.7e-25 120.2 172 43.0
Haze_26704 Corylus avellana HOM05D002419 ORTHO05D164840 1.3e-22 110.5 166 31.9
CAN.G352.38 Capsicum annuum HOM05D002419 ORTHO05D005441 1.8e-22 110.2 168 42.9
arahy.Tifrunner.gnm1.ann1.VN8392 Arachis hypogaea HOM05D002419 ORTHO05D005441 2.5e-21 106.3 75 64.0
Peaxi162Scf00101g00114 Petunia axillaris HOM05D002419 ORTHO05D005441 2.8e-20 102.8 123 43.1
arahy.Tifrunner.gnm1.ann1.9EY0GB Arachis hypogaea HOM05D002419 ORTHO05D005441 2.9e-17 92.8 139 43.2
Cfa024491 Carpinus fangiana HOM05D002419 ORTHO05D126234 4.6e-15 85.5 182 29.7
vmacro14073 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 1.3e-14 84.0 62 59.7
HPP92_005089 Vanilla planifolia HOM05D002419 ORTHO05D005441 3.9e-14 82.4 63 63.5
PGSC0003DMG400008253 Solanum tuberosum HOM05D002419 ORTHO05D030681 2.0e-10 70.1 56 53.6
PGSC0003DMG400035128 Solanum tuberosum HOM05D002419 ORTHO05D030681 4.5e-10 68.9 68 48.5
SHI24547 Sapria himalayana HOM05D002419 ORTHO05D005441 4.2e-08 62.4 79 35.4
Actinidia21172 Actinidia chinensis HOM05D002419 ORTHO05D055483 5.5e-08 62.0 35 77.1
PGSC0003DMG400039134 Solanum tuberosum HOM05D002419 ORTHO05D030681 9.4e-08 61.2 56 51.8


User provided reference genes

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