Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 5.2e-254 880.6 443 100.0
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 2.3e-113 413.3 444 50.0
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 4.0e-113 412.5 445 49.9
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 3.3e-107 392.9 441 48.5
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.8e-97 360.5 443 45.6
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 1.3e-95 354.4 452 44.9
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 1.1e-94 351.3 449 43.7
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 1.6e-93 347.4 451 43.2
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 2.7e-93 346.7 445 44.3
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 4.6e-93 345.9 450 44.2
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 6.0e-93 345.5 455 42.2
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 2.3e-92 343.6 454 43.6
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 3.0e-92 343.2 455 42.2
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 8.7e-92 341.7 445 44.3
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 8.7e-92 341.7 444 43.5
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 8.7e-92 341.7 446 43.7
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 2.5e-91 340.1 452 42.7
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 5.6e-91 339.0 448 42.6
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 7.3e-91 338.6 446 42.8
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 7.3e-91 338.6 443 43.8
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 1.6e-90 337.4 448 43.5
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 1.6e-90 337.4 458 42.1
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 1.6e-90 337.4 448 42.4
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 1.6e-90 337.4 454 43.4
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 2.1e-90 337.0 446 42.8
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 2.1e-90 337.0 456 42.5
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 2.8e-90 336.7 453 42.6
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 2.8e-90 336.7 452 42.7
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 2.8e-90 336.7 444 43.0
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 4.8e-90 335.9 443 43.1
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 6.2e-90 335.5 456 42.3
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 1.1e-89 334.7 450 43.3
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 1.4e-89 334.3 453 43.5
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 1.8e-89 334.0 451 41.9
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 1.8e-89 334.0 453 43.3
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 1.8e-89 334.0 458 42.6
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 2.4e-89 333.6 448 42.6
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 2.4e-89 333.6 448 41.7
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 3.1e-89 333.2 453 42.2
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 4.0e-89 332.8 448 43.5
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 5.3e-89 332.4 447 42.3
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 5.3e-89 332.4 448 42.9
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 5.3e-89 332.4 451 42.4
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 6.9e-89 332.0 450 42.7
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 6.9e-89 332.0 450 42.7
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 6.9e-89 332.0 461 41.9
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 9.0e-89 331.6 450 42.9
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.5e-88 330.9 452 41.8
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 2.0e-88 330.5 454 41.9
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 2.0e-88 330.5 456 42.8
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 2.6e-88 330.1 443 42.4
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 5.8e-88 328.9 452 41.8
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 9.9e-88 328.2 451 43.0
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 9.9e-88 328.2 453 42.8
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 9.9e-88 328.2 453 42.8
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.3e-87 327.8 453 42.6
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 2.2e-87 327.0 451 43.0
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 2.9e-87 326.6 439 41.0
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 3.8e-87 326.2 449 42.5
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 3.8e-87 326.2 454 41.0
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 4.9e-87 325.9 476 40.5
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 6.4e-87 325.5 447 40.9
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 1.4e-86 324.3 443 42.0
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 1.4e-86 324.3 443 42.0
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 1.4e-86 324.3 440 43.2
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 1.9e-86 323.9 456 42.1
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 1.9e-86 323.9 451 41.2
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 1.9e-86 323.9 452 42.5
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 1.9e-86 323.9 448 41.7
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 1.9e-86 323.9 459 42.0
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 3.2e-86 323.2 452 42.3
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 1.6e-85 320.9 436 41.7
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 2.1e-85 320.5 451 41.5
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 3.5e-85 319.7 436 42.9
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 3.5e-85 319.7 455 40.2
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 4.6e-85 319.3 443 42.0
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 4.6e-85 319.3 443 42.0
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.6e-85 319.3 447 41.8
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 3.0e-84 316.6 459 40.5
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 3.9e-84 316.2 449 41.9
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 5.1e-84 315.8 454 41.6
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 9.6e-83 311.6 453 40.8
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 1.3e-82 311.2 450 40.2
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 1.6e-82 310.8 450 42.7
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.6e-82 310.8 462 41.3
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 2.1e-82 310.5 459 40.7
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 2.8e-82 310.1 457 42.2
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 1.4e-81 307.8 448 40.0
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.8e-81 307.4 456 40.1
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 4.0e-81 306.2 460 40.7
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 1.3e-79 301.2 471 37.4
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 2.2e-79 300.4 391 43.7
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 1.2e-77 294.7 447 39.8
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.2e-77 294.7 458 39.7
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 2.1e-77 293.9 504 38.3
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.8e-76 290.8 382 44.0
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 3.9e-76 289.7 460 39.3
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 2.8e-74 283.5 434 40.3
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 5.3e-73 279.3 443 38.6
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 3.4e-72 276.6 363 43.5
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 2.2e-71 273.9 357 43.7
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 3.8e-71 273.1 449 38.5
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 3.2e-70 270.0 453 38.2
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 1.3e-68 264.6 453 37.5
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 4.3e-67 259.6 358 40.2
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 4.3e-67 259.6 452 37.4
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.8e-65 254.2 328 43.3
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 4.2e-62 243.0 459 37.3
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.1e-61 240.7 375 39.7
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 2.8e-58 230.3 313 43.5
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 2.2e-55 220.7 369 38.8
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 3.8e-55 219.9 318 41.2
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 1.8e-52 211.1 318 39.6
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 5.2e-44 183.0 211 46.9
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 1.2e-40 171.8 251 41.4
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 3.2e-38 163.7 440 30.9
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.7e-29 134.0 228 37.3
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 8.8e-28 129.0 224 36.2
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.1e-21 107.8 144 38.9
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-10 70.9 188 31.4
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 6.4e-10 69.7 111 34.2
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 1.1e-09 68.9 122 33.6
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 1.7e-07 61.6 95 34.7
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.9e-06 58.2 111 32.4


User provided reference genes

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