Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g24147 Chara braunii HOM05D005624 ORTHO05D006896 2.1e-114 415.6 197 100.0
ClCG10G013180 Citrullus lanatus HOM05D005624 ORTHO05D006896 3.1e-41 172.6 153 56.2
PGR119G0553 Punica granatum HOM05D005624 ORTHO05D006896 2.0e-40 169.9 166 53.6
Sed0005404 Sechium edule HOM05D005624 ORTHO05D006896 3.4e-40 169.1 153 55.6
Actinidia33983 Actinidia chinensis HOM05D005624 ORTHO05D006896 5.8e-40 168.3 160 52.5
ATR0582G264 Amborella trichopoda HOM05D005624 ORTHO05D006896 1.0e-39 167.5 166 52.4
CsaV3_3G043430 Cucumis sativus L. HOM05D005624 ORTHO05D006896 1.0e-39 167.5 153 54.9
Gohir.A08G221500 Gossypium hirsutum HOM05D005624 ORTHO05D006896 1.0e-39 167.5 162 51.9
Gohir.D08G238100 Gossypium hirsutum HOM05D005624 ORTHO05D006896 1.0e-39 167.5 162 51.9
Cfa020947 Carpinus fangiana HOM05D005624 ORTHO05D006896 1.3e-39 167.2 162 51.9
Haze_19383 Corylus avellana HOM05D005624 ORTHO05D006896 1.3e-39 167.2 162 51.9
Gorai.004G253600 Gossypium raimondii HOM05D005624 ORTHO05D006896 1.3e-39 167.2 162 51.2
GSVIVG01001144001 Vitis vinifera HOM05D005624 ORTHO05D006896 1.3e-39 167.2 165 52.7
AagrBONN_evm.TU.Sc2ySwM_117.3158 Anthoceros agrestis HOM05D005624 ORTHO05D006896 5.0e-39 165.2 151 53.6
CiPaw.05G096300 Carya illinoinensis HOM05D005624 ORTHO05D006896 5.0e-39 165.2 166 50.6
Rhsim12G0090500 Rhododendron simsii HOM05D005624 ORTHO05D006896 5.0e-39 165.2 160 52.5
Glyma.16G101200 Glycine max HOM05D005624 ORTHO05D006896 8.4e-39 164.5 158 55.1
Sed0018373 Sechium edule HOM05D005624 ORTHO05D006896 8.4e-39 164.5 157 53.5
Nitab4.5_0001089g0030 Nicotiana tabacum HOM05D005624 ORTHO05D006896 1.1e-38 164.1 160 53.1
Nitab4.5_0011777g0020 Nicotiana tabacum HOM05D005624 ORTHO05D006896 1.1e-38 164.1 160 53.1
QL03p047013 Quercus lobata HOM05D005624 ORTHO05D006896 1.1e-38 164.1 160 51.9
Sc17g0003450 Simmondsia chinensis HOM05D005624 ORTHO05D006896 1.9e-38 163.3 160 53.1
Mapoly0097s0090 Marchantia polymorpha HOM05D005624 ORTHO05D006896 2.5e-38 162.9 152 55.9
THA.LOC104811263 Tarenaya hassleriana HOM05D005624 ORTHO05D006896 2.5e-38 162.9 164 50.0
Migut.L00899 Erythranthe guttata HOM05D005624 ORTHO05D006896 3.2e-38 162.5 162 50.6
HPP92_013550 Vanilla planifolia HOM05D005624 ORTHO05D006896 3.2e-38 162.5 159 52.2
Zm00001eb071390 Zea mays HOM05D005624 ORTHO05D006896 3.2e-38 162.5 168 52.4
Glyma.08G266400 Glycine max HOM05D005624 ORTHO05D006896 4.2e-38 162.2 160 53.8
Lsat_1_v5_gn_1_78160 Lactuca sativa HOM05D005624 ORTHO05D006896 4.2e-38 162.2 163 52.1
SMO164G0111 Selaginella moellendorffii HOM05D005624 ORTHO05D006896 4.2e-38 162.2 153 56.2
Ah.03g134040 Amaranthus hybridus HOM05D005624 ORTHO05D006896 7.1e-38 161.4 168 51.8
MSTRG.8074 Avicennia marina HOM05D005624 ORTHO05D006896 7.1e-38 161.4 169 49.1
BraA03t09846Z Brassica rapa HOM05D005624 ORTHO05D006896 7.1e-38 161.4 164 50.6
Lj4g0021292 Lotus japonicus HOM05D005624 ORTHO05D006896 7.1e-38 161.4 167 53.3
Hund05398 Selenicereus undatus HOM05D005624 ORTHO05D006896 7.1e-38 161.4 170 51.2
Aqoxy3G01649 Aquilegia oxysepala HOM05D005624 ORTHO05D006896 1.2e-37 160.6 160 50.0
AL6G22400 Arabidopsis lyrata HOM05D005624 ORTHO05D006896 1.2e-37 160.6 164 50.6
Sp6g31930 Schrenkiella parvula HOM05D005624 ORTHO05D006896 1.2e-37 160.6 164 50.0
Zm00001eb318180 Zea mays HOM05D005624 ORTHO05D006896 1.2e-37 160.6 165 52.7
DCAR_028131 Daucus carota HOM05D005624 ORTHO05D006896 1.6e-37 160.2 162 52.5
MD13G1135700 Malus domestica HOM05D005624 ORTHO05D006896 1.6e-37 160.2 164 49.4
Prupe.1G209600 Prunus persica HOM05D005624 ORTHO05D006896 2.1e-37 159.8 164 49.4
Aa31LG3G15530 Aethionema arabicum HOM05D000602 ORTHO05D001147 2.7e-37 159.5 164 49.4
BcaB01g05468 Brassica carinata HOM05D005624 ORTHO05D006896 2.7e-37 159.5 158 51.3
CARHR201540 Cardamine hirsuta HOM05D005624 ORTHO05D006896 2.7e-37 159.5 164 49.4
Peaxi162Scf00681g00118 Petunia axillaris HOM05D005624 ORTHO05D006896 2.7e-37 159.5 160 51.9
Psat4g111480 Pisum sativum HOM05D005624 ORTHO05D006896 2.7e-37 159.5 158 51.9
VMungo0251G1277 Vigna mungo HOM05D005624 ORTHO05D006896 2.7e-37 159.5 158 53.2
Peaxi162Scf00334g00119 Petunia axillaris HOM05D005624 ORTHO05D006896 3.5e-37 159.1 151 51.7
AT5G11680 Arabidopsis thaliana HOM05D005624 ORTHO05D006896 4.6e-37 158.7 164 49.4
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 4.6e-37 158.7 158 50.6
BolC3t13101H Brassica oleracea HOM05D005624 ORTHO05D006896 4.6e-37 158.7 158 50.6
CSS0016097 Camellia sinensis var. sinensis HOM05D005624 ORTHO05D006896 4.6e-37 158.7 160 51.2
Ciclev10005917m.g Citrus clementina HOM05D005624 ORTHO05D006896 4.6e-37 158.7 153 52.3
Duzib128G1380 Durio zibethinus HOM05D005624 ORTHO05D006896 4.6e-37 158.7 166 49.4
arahy.Tifrunner.gnm1.ann1.CA7SJ1 Arachis hypogaea HOM05D005624 ORTHO05D006896 6.1e-37 158.3 172 49.4
arahy.Tifrunner.gnm1.ann1.YB0CZG Arachis hypogaea HOM05D005624 ORTHO05D006896 6.1e-37 158.3 172 49.4
Sopen04g004320 Solanum pennellii HOM05D005624 ORTHO05D006896 6.1e-37 158.3 161 51.6
BcaC03g13386 Brassica carinata HOM05D005624 ORTHO05D006896 7.9e-37 157.9 164 49.4
Eucgr.J01702 Eucalyptus grandis HOM05D005624 ORTHO05D006896 7.9e-37 157.9 164 50.6
Hma1.2p1_0562F.1_g179050 Hydrangea macrophylla HOM05D005624 ORTHO05D006896 7.9e-37 157.9 164 50.6
MD16G1131300 Malus domestica HOM05D005624 ORTHO05D006896 7.9e-37 157.9 164 48.2
Oeu032685.1 Olea europaea HOM05D005624 ORTHO05D006896 7.9e-37 157.9 151 51.7
TAR622G0071 Trochodendron aralioides HOM05D005624 ORTHO05D006896 7.9e-37 157.9 160 50.6
RcHm_v2.0_Chr4g0428141 Rosa chinensis HOM05D005624 ORTHO05D006896 1.0e-36 157.5 161 49.7
Thecc.05G235200 Theobroma cacao HOM05D005624 ORTHO05D006896 1.0e-36 157.5 165 50.3
TPR.G6115 Trifolium pratense HOM05D005624 ORTHO05D006896 1.0e-36 157.5 167 50.9
CAN.G39.18 Capsicum annuum HOM05D005624 ORTHO05D006896 1.3e-36 157.1 151 50.3
AUR62008562 Chenopodium quinoa HOM05D005624 ORTHO05D006896 1.3e-36 157.1 168 50.0
AUR62033199 Chenopodium quinoa HOM05D005624 ORTHO05D006896 1.3e-36 157.1 168 50.0
TWI75G1298 Tripterygium wilfordii HOM05D005624 ORTHO05D006896 1.3e-36 157.1 168 50.6
Atru.chr12.1491 Acer truncatum HOM05D005624 ORTHO05D006896 1.8e-36 156.8 160 51.2
Manes.08G097600 Manihot esculenta HOM05D005624 ORTHO05D006896 1.8e-36 156.8 158 52.5
PGSC0003DMG400029983 Solanum tuberosum HOM05D005624 ORTHO05D006896 1.8e-36 156.8 151 51.0
EL10Ac7g17520 Beta vulgaris HOM05D005624 ORTHO05D006896 2.3e-36 156.4 167 50.9
Carub.0006s1018 Capsella rubella HOM05D005624 ORTHO05D006896 2.3e-36 156.4 164 48.8
FAN17G0486 Fragaria x ananassa HOM05D005624 ORTHO05D006896 2.3e-36 156.4 161 47.8
PGSC0003DMG402032565 Solanum tuberosum HOM05D005624 ORTHO05D006896 2.3e-36 156.4 161 51.6
BolC2t06481H Brassica oleracea HOM05D005624 ORTHO05D006896 3.0e-36 156.0 164 48.8
Lj3A918T40 Lonicera japonica HOM05D005624 ORTHO05D006896 3.0e-36 156.0 158 50.0
Medtr8g070860 Medicago truncatula HOM05D005624 ORTHO05D006896 3.0e-36 156.0 163 50.9
Pp3c7_9270 Physcomitrium patens HOM05D005624 ORTHO05D006896 3.0e-36 156.0 155 53.5
vmacro16032 Vaccinium macrocarpon HOM05D005624 ORTHO05D006896 3.0e-36 156.0 160 49.4
Zm00001eb102600 Zea mays HOM05D005624 ORTHO05D006896 3.0e-36 156.0 169 50.3
COL.COLO4_32213 Corchorus olitorius HOM05D005624 ORTHO05D006896 3.9e-36 155.6 166 48.8
ECA236G4393 Erigeron canadensis HOM05D000127 ORTHO05D000243 3.9e-36 155.6 155 52.3
FvH4_4g21930 Fragaria vesca HOM05D005624 ORTHO05D006896 3.9e-36 155.6 159 47.8
Phvul.003G274200 Phaseolus vulgaris HOM05D005624 ORTHO05D006896 3.9e-36 155.6 161 50.9
Potri.003G158200 Populus trichocarpa HOM05D005624 ORTHO05D006896 3.9e-36 155.6 168 49.4
SalBow2G1530 Salvia bowleyana HOM05D005624 ORTHO05D006896 3.9e-36 155.6 168 47.0
CANSAT25G1757 Cannabis sativa HOM05D005624 ORTHO05D006896 8.7e-36 154.5 163 49.1
Cc11_g14800 Coffea canephora HOM05D005624 ORTHO05D006896 1.1e-35 154.1 162 50.0
PSO478G3843 Papaver somniferum HOM05D005624 ORTHO05D006896 1.1e-35 154.1 162 48.8
Sopen02g002020 Solanum pennellii HOM05D005624 ORTHO05D006896 1.1e-35 154.1 151 49.7
unitig_22.g6367 Utricularia gibba HOM05D005624 ORTHO05D006896 1.1e-35 154.1 175 47.4
HanXRQChr10g0312121 Helianthus annuus HOM05D005624 ORTHO05D006896 1.5e-35 153.7 164 48.2
Solyc04g009190.3 Solanum lycopersicum HOM05D005624 ORTHO05D006896 1.5e-35 153.7 161 50.9
Solyc02g005603.1 Solanum lycopersicum HOM05D005624 ORTHO05D006896 2.5e-35 152.9 151 49.7
PSO017G6046 Papaver somniferum HOM05D005624 ORTHO05D006896 4.3e-35 152.1 162 48.1
Lsat_1_v5_gn_5_173840 Lactuca sativa HOM05D005624 ORTHO05D006896 5.7e-35 151.8 168 44.0
Potri.001G072600 Populus trichocarpa HOM05D005624 ORTHO05D006896 5.7e-35 151.8 168 48.2
Sabra01G0051200 Salix brachista HOM05D005624 ORTHO05D006896 5.7e-35 151.8 166 49.4
Thhalv10014678m.g Eutrema salsugineum HOM05D005624 ORTHO05D006896 9.7e-35 151.0 153 49.7
TWI18G0768 Tripterygium wilfordii HOM05D005624 ORTHO05D006896 2.2e-34 149.8 169 48.5
Dinv02966 Davidia involucrata HOM05D005624 ORTHO05D006896 4.5e-32 142.1 142 51.4
CAN.G619.7 Capsicum annuum HOM05D005624 ORTHO05D006896 3.8e-31 139.0 128 52.3
MELO3C026760.2 Cucumis melo HOM05D005624 ORTHO05D006896 6.5e-31 138.3 129 54.3
CiPaw.06G112400 Carya illinoinensis HOM05D005624 ORTHO05D006896 8.5e-31 137.9 176 45.5
MBI11_g04265_MAGBIO Magnolia biondii HOM05D005624 ORTHO05D006896 1.1e-30 137.5 159 45.3
HanXRQChr01g0012261 Helianthus annuus HOM05D005624 ORTHO05D006896 2.5e-30 136.3 160 43.8
unitig_8.g3112 Utricularia gibba HOM05D005624 ORTHO05D006896 4.2e-30 135.6 188 41.5
Nitab4.5_0004301g0080 Nicotiana tabacum HOM05D005624 ORTHO05D006896 7.9e-29 131.3 145 47.6
MBI07_g41258_MAGBIO Magnolia biondii HOM05D005624 ORTHO05D006896 1.8e-28 130.2 123 51.2
Nitab4.5_0000069g0230 Nicotiana tabacum HOM05D005624 ORTHO05D006896 3.9e-28 129.0 145 46.9
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 8.8e-28 127.9 147 46.3
Gohir.A13G159151 Gossypium hirsutum HOM05D005624 ORTHO05D006896 5.7e-27 125.2 139 46.8
Peaxi162Scf00021g02113 Petunia axillaris HOM05D005624 ORTHO05D006896 1.7e-26 123.6 145 44.8
Gorai.013G198700 Gossypium raimondii HOM05D005624 ORTHO05D006896 2.8e-26 122.9 146 44.5
Cre03.g189100 Chlamydomonas reinhardtii HOM05D005624 ORTHO05D006896 8.5e-23 111.3 161 37.3
Solyc01g008220.3 Solanum lycopersicum HOM05D005624 ORTHO05D006896 1.1e-22 110.9 158 41.1
Zm00001eb052330 Zea mays HOM05D005624 ORTHO05D006896 1.4e-22 110.5 120 49.2
PGSC0003DMG400016363 Solanum tuberosum HOM05D005624 ORTHO05D006896 1.9e-22 110.2 155 42.6
Zm00001eb036000 Zea mays HOM05D005624 ORTHO05D006896 3.2e-22 109.4 120 49.2
Duzib177G0503 Durio zibethinus HOM05D005624 ORTHO05D006896 6.1e-21 105.1 161 38.5
Lalb_Chr05g0228971 Lupinus albus HOM05D005624 ORTHO05D006896 4.4e-19 99.0 78 60.3
C02p05330 Brassica napus HOM05D005624 ORTHO05D006896 1.1e-14 84.3 95 44.2
SEGI_14660 Sequoiadendron giganteum HOM05D005624 ORTHO05D006896 2.1e-13 80.1 65 63.1
CSS0031660 Camellia sinensis var. sinensis HOM05D005624 ORTHO05D006896 8.0e-13 78.2 62 56.5
Migut.L00595 Erythranthe guttata HOM05D005624 ORTHO05D006896 2.6e-11 73.2 58 60.3


User provided reference genes

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