Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23992 Chara braunii HOM05D021880 ORTHO05D026584 1.4e-288 995.7 574 100.0
Pp3c6_26950 Physcomitrium patens HOM05D021880 ORTHO05D026584 3.7e-119 433.0 559 53.5
AagrBONN_evm.TU.Sc2ySwM_228.3066 Anthoceros agrestis HOM05D021880 ORTHO05D026584 3.2e-115 419.9 553 47.9
Mapoly0015s0032 Marchantia polymorpha HOM05D021880 ORTHO05D026584 4.0e-97 359.8 560 47.3
Cc09_g10430 Coffea canephora HOM05D002887 ORTHO05D003159 2.6e-16 91.3 462 24.2
AagrBONN_evm.TU.Sc2ySwM_368.912 Anthoceros agrestis HOM05D002887 ORTHO05D003159 1.3e-15 89.0 474 26.2
Nitab4.5_0003679g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 1.4e-12 79.0 468 23.3
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 4.4e-11 73.9 131 35.9
SEGI_36055 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 1.3e-10 72.4 484 24.0
CSS0047715 Camellia sinensis var. sinensis HOM05D002125 ORTHO05D002105 2.2e-10 71.6 163 31.3
Glyma.20G105000 Glycine max HOM05D002887 ORTHO05D003159 2.2e-10 71.6 480 23.5
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 2.2e-10 71.6 130 35.4
MBI19_g11829_MAGBIO Magnolia biondii HOM05D003317 ORTHO05D003696 4.8e-10 70.5 242 30.6
Manes.06G049300 Manihot esculenta HOM05D002887 ORTHO05D003159 4.8e-10 70.5 418 24.6
CSS0044899 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 6.3e-10 70.1 472 21.4
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 6.3e-10 70.1 131 36.6
Manes.11G098300 Manihot esculenta HOM05D002887 ORTHO05D003159 8.2e-10 69.7 470 22.6
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 1.4e-09 68.9 130 35.4
Prupe.8G170700 Prunus persica HOM05D002887 ORTHO05D003159 1.8e-09 68.6 478 22.4
Mapoly0113s0006 Marchantia polymorpha HOM05D003819 ORTHO05D005291 5.3e-09 67.0 160 30.0
VMungo0331G0655 Vigna mungo HOM05D001219 ORTHO05D001017 5.3e-09 67.0 324 25.9
Rhsim06G0127200 Rhododendron simsii HOM05D001219 ORTHO05D001017 7.0e-09 66.6 363 23.4
GSVIVG01023957001 Vitis vinifera HOM05D002887 ORTHO05D003159 7.0e-09 66.6 485 22.7
TAR624G0435 Trochodendron aralioides HOM05D003317 ORTHO05D003696 9.1e-09 66.2 304 28.9
Actinidia14674 Actinidia chinensis HOM05D002813 ORTHO05D003203 1.2e-08 65.9 243 29.2
Glyma.07G026100 Glycine max HOM05D001219 ORTHO05D001017 1.2e-08 65.9 321 26.5
Hma1.2p1_0394F.1_g143320 Hydrangea macrophylla HOM05D001905 ORTHO05D001820 1.6e-08 65.5 187 27.8
SGA_v2.0_scaffold32G13321 Striga asiatica HOM05D002887 ORTHO05D003159 1.6e-08 65.5 498 21.3
COL.COLO4_31487 Corchorus olitorius HOM05D000300 ORTHO05D000383 3.5e-08 64.3 160 27.5
Manes.02G222100 Manihot esculenta HOM05D001905 ORTHO05D001820 3.5e-08 64.3 358 25.1
Phvul.007G016400 Phaseolus vulgaris HOM05D002887 ORTHO05D003159 4.5e-08 63.9 477 23.9
Nitab4.5_0001235g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 7.7e-08 63.2 404 21.8
Rhsim01G0031300 Rhododendron simsii HOM05D001219 ORTHO05D001017 1.3e-07 62.4 372 23.4
Sp1g41210 Schrenkiella parvula HOM05D002887 ORTHO05D003159 1.3e-07 62.4 532 22.9
COL.COLO4_31198 Corchorus olitorius HOM05D001219 ORTHO05D001017 1.7e-07 62.0 155 27.1
Nn2g11037 Nelumbo nucifera HOM05D002125 ORTHO05D002105 1.7e-07 62.0 239 24.7
COL.COLO4_33586 Corchorus olitorius HOM05D003819 ORTHO05D005291 2.2e-07 61.6 163 32.5
SEGI_24003 Sequoiadendron giganteum HOM05D002325 ORTHO05D000336 2.2e-07 61.6 164 28.7
SEGI_38686 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 2.2e-07 61.6 192 28.1
TWI75G1235 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 2.2e-07 61.6 397 23.4
Migut.K01481 Erythranthe guttata HOM05D000530 ORTHO05D000621 3.8e-07 60.8 398 24.6
CsaV3_7G005710 Cucumis sativus L. HOM05D003819 ORTHO05D005291 5.0e-07 60.5 162 30.9
Rhsim06G0054900 Rhododendron simsii HOM05D001905 ORTHO05D001820 5.0e-07 60.5 231 27.7
ATR1133G039 Amborella trichopoda HOM05D002325 ORTHO05D000336 8.5e-07 59.7 145 29.0
COL.COLO4_31329 Corchorus olitorius HOM05D001219 ORTHO05D001017 8.5e-07 59.7 114 31.6
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 8.5e-07 59.7 148 31.1
Cpa.g.sc52.168 Carica papaya HOM05D003819 ORTHO05D005291 1.1e-06 59.3 167 29.9
Ciclev10004705m.g Citrus clementina HOM05D002762 ORTHO05D004643 1.1e-06 59.3 209 25.8
ECA248G2216 Erigeron canadensis HOM05D002325 ORTHO05D000336 1.1e-06 59.3 174 27.6
Phvul.010G159200 Phaseolus vulgaris HOM05D001219 ORTHO05D001017 1.1e-06 59.3 335 25.1
CSS0022259 Camellia sinensis var. sinensis HOM05D002813 ORTHO05D003203 1.5e-06 58.9 204 27.5
COL.COLO4_31467 Corchorus olitorius HOM05D001219 ORTHO05D001017 1.5e-06 58.9 322 23.9
Glyma.14G200300 Glycine max HOM05D002125 ORTHO05D002105 1.5e-06 58.9 237 22.8
TPR.G9694 Trifolium pratense HOM05D001219 ORTHO05D001017 1.5e-06 58.9 193 25.9
SMO139G0037 Selaginella moellendorffii HOM05D002325 ORTHO05D000336 2.5e-06 58.2 149 28.9
SEGI_37199 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 2.5e-06 58.2 128 31.2
SEGI_41336 Sequoiadendron giganteum HOM05D002325 ORTHO05D000336 2.5e-06 58.2 168 26.2
AUR62013441 Chenopodium quinoa HOM05D001219 ORTHO05D001017 3.2e-06 57.8 357 24.4
Potri.011G066700 Populus trichocarpa HOM05D003819 ORTHO05D005291 3.2e-06 57.8 203 28.1
SEGI_40276 Sequoiadendron giganteum HOM05D018674 ORTHO05D020861 3.2e-06 57.8 180 26.1
RhsimUnG0244400 Rhododendron simsii HOM05D001219 ORTHO05D001017 4.2e-06 57.4 116 30.2
Actinidia40216 Actinidia chinensis HOM05D002762 ORTHO05D004643 5.5e-06 57.0 137 29.9
MELO3C018720.2 Cucumis melo HOM05D003819 ORTHO05D005291 5.5e-06 57.0 162 30.2
Eucgr.K02937 Eucalyptus grandis HOM05D002125 ORTHO05D002105 5.5e-06 57.0 199 27.6
QL11p052640 Quercus lobata HOM05D002887 ORTHO05D003159 5.5e-06 57.0 475 21.9
SEGI_20328 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 5.5e-06 57.0 133 31.6
TPR.G29730 Trifolium pratense HOM05D001219 ORTHO05D001017 5.5e-06 57.0 175 25.7
VMungo0720G3147 Vigna mungo HOM05D002887 ORTHO05D003159 5.5e-06 57.0 476 22.7
HanXRQChr08g0226481 Helianthus annuus HOM05D002762 ORTHO05D004643 7.2e-06 56.6 263 25.9
Medtr5g088250 Medicago truncatula HOM05D001219 ORTHO05D001017 7.2e-06 56.6 206 26.2
Peaxi162Scf00232g00091 Petunia axillaris HOM05D002887 ORTHO05D003159 7.2e-06 56.6 241 25.3
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 7.2e-06 56.6 239 24.7
Gohir.D12G091900 Gossypium hirsutum HOM05D003819 ORTHO05D005291 9.4e-06 56.2 161 30.4
Nn2g13283 Nelumbo nucifera HOM05D002125 ORTHO05D002105 9.4e-06 56.2 201 27.4
SGA_v2.0_scaffold85G26673 Striga asiatica HOM05D002125 ORTHO05D002105 9.4e-06 56.2 69 39.1


User provided reference genes

Program Settings