Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23809 Chara braunii HOM05D004539 ORTHO05D005482 0.0e+00 1189.9 714 100.0
Mapoly0079s0035 Marchantia polymorpha HOM05D004539 ORTHO05D005482 4.1e-59 233.8 722 32.4
Pp3c26_3100 Physcomitrium patens HOM05D004539 ORTHO05D005482 2.8e-55 221.1 721 31.9
SEGI_17236 Sequoiadendron giganteum HOM05D004539 ORTHO05D005482 9.5e-48 196.1 724 31.8
ATR0691G247 Amborella trichopoda HOM05D004539 ORTHO05D005482 4.3e-40 170.6 715 28.5
COL.COLO4_38586 Corchorus olitorius HOM05D004539 ORTHO05D005482 9.5e-40 169.5 718 27.9
CANSAT54G2989 Cannabis sativa HOM05D004539 ORTHO05D005482 1.6e-39 168.7 720 29.6
Gorai.001G253500 Gossypium raimondii HOM05D004539 ORTHO05D005482 2.1e-39 168.3 725 28.6
COL.COLO4_16338 Corchorus olitorius HOM05D004539 ORTHO05D005482 2.8e-39 167.9 718 28.4
Gohir.D07G219000 Gossypium hirsutum HOM05D004539 ORTHO05D005482 3.6e-39 167.5 725 28.6
Nn6g32243 Nelumbo nucifera HOM05D004539 ORTHO05D005482 1.4e-38 165.6 723 30.0
Cpa.g.sc147.12 Carica papaya HOM05D004539 ORTHO05D005482 2.3e-38 164.9 718 28.8
Prupe.1G370700 Prunus persica HOM05D004539 ORTHO05D005482 3.1e-38 164.5 719 28.8
Gohir.A07G212900 Gossypium hirsutum HOM05D004539 ORTHO05D005482 8.9e-38 162.9 725 28.7
Duzib192G0399 Durio zibethinus HOM05D004539 ORTHO05D005482 1.2e-37 162.5 722 29.1
Lsat_1_v5_gn_4_116341 Lactuca sativa HOM05D004539 ORTHO05D005482 2.2e-36 158.3 721 29.0
TWI60G0405 Tripterygium wilfordii HOM05D004539 ORTHO05D005482 2.2e-36 158.3 724 28.7
Lalb_Chr03g0033831 Lupinus albus HOM05D004539 ORTHO05D005482 1.9e-35 155.2 551 31.6
Sabra05G0181000 Salix brachista HOM05D004539 ORTHO05D005482 1.9e-35 155.2 624 29.3
Hund17219 Selenicereus undatus HOM05D004539 ORTHO05D005482 7.1e-35 153.3 723 29.3
Migut.C00791 Erythranthe guttata HOM05D004539 ORTHO05D005482 2.1e-34 151.8 545 30.5
SalBow6G1219 Salvia bowleyana HOM05D004539 ORTHO05D005482 2.1e-34 151.8 719 27.8
Hund26867 Selenicereus undatus HOM05D004539 ORTHO05D005482 4.6e-34 150.6 725 27.9
Aa31LG4G18400 Aethionema arabicum HOM05D004539 ORTHO05D005482 6.0e-34 150.2 625 28.3
Glyma.05G023000 Glycine max HOM05D004539 ORTHO05D005482 6.0e-34 150.2 715 29.1
TAR629G0090 Trochodendron aralioides HOM05D004539 ORTHO05D005482 1.3e-33 149.1 723 29.2
Phvul.003G186400 Phaseolus vulgaris HOM05D004539 ORTHO05D005482 1.7e-33 148.7 718 28.7
Thecc.04G277100 Theobroma cacao HOM05D004539 ORTHO05D005482 1.7e-33 148.7 724 27.9
CiPaw.08G062700 Carya illinoinensis HOM05D004539 ORTHO05D005482 2.3e-33 148.3 721 30.1
Oeu036929.3 Olea europaea HOM05D004539 ORTHO05D005482 5.1e-33 147.1 548 31.2
HPP92_016110 Vanilla planifolia HOM05D004539 ORTHO05D005482 1.9e-32 145.2 724 27.9
Lj1g0010849 Lotus japonicus HOM05D004539 ORTHO05D005482 2.5e-32 144.8 719 28.5
VMungo1215G0403 Vigna mungo HOM05D004539 ORTHO05D005482 3.3e-32 144.4 646 29.3
Cpa.g.sc140.19 Carica papaya HOM05D004539 ORTHO05D005482 4.3e-32 144.1 717 28.6
ECA232G1826 Erigeron canadensis HOM05D004539 ORTHO05D005482 4.3e-32 144.1 720 27.6
MD08G1018100 Malus domestica HOM05D004539 ORTHO05D005482 4.3e-32 144.1 718 27.4
Manes.05G152500 Manihot esculenta HOM05D004539 ORTHO05D005482 9.5e-32 142.9 720 28.9
Cfa013903 Carpinus fangiana HOM05D004539 ORTHO05D005482 1.6e-31 142.1 624 28.7
BraA03t13876Z Brassica rapa HOM05D004539 ORTHO05D005482 2.1e-31 141.7 651 27.8
Lj2g0012026 Lotus japonicus HOM05D004539 ORTHO05D005482 2.1e-31 141.7 617 28.4
Potri.005G234800 Populus trichocarpa HOM05D004539 ORTHO05D005482 2.8e-31 141.4 642 28.7
SGA_v2.0_scaffold92G28288 Striga asiatica HOM05D004539 ORTHO05D005482 3.6e-31 141.0 722 28.1
Sabra02G0022100 Salix brachista HOM05D004539 ORTHO05D005482 6.2e-31 140.2 642 27.3
A03p47640 Brassica napus HOM05D004539 ORTHO05D005482 1.8e-30 138.7 651 27.6
BolC7t45082H Brassica oleracea HOM05D004539 ORTHO05D005482 2.3e-30 138.3 648 27.6
RcHm_v2.0_Chr6g0302141 Rosa chinensis HOM05D004539 ORTHO05D005482 2.3e-30 138.3 470 29.8
SGA_v2.0_scaffold4G01895 Striga asiatica HOM05D004539 ORTHO05D005482 2.3e-30 138.3 722 28.0
Cc10_g02110 Coffea canephora HOM05D004539 ORTHO05D005482 3.1e-30 137.9 723 28.6
Hma1.2p1_0773F.1_g216150 Hydrangea macrophylla HOM05D004539 ORTHO05D005482 3.1e-30 137.9 735 27.5
unitig_578.g16661 Utricularia gibba HOM05D004539 ORTHO05D005482 4.0e-30 137.5 719 27.4
DCAR_013849 Daucus carota HOM05D004539 ORTHO05D005482 6.8e-30 136.7 723 27.9
MD15G1017400 Malus domestica HOM05D004539 ORTHO05D005482 8.9e-30 136.3 722 28.0
Dinv31810 Davidia involucrata HOM05D004539 ORTHO05D005482 2.6e-29 134.8 719 27.8
Haze_22584 Corylus avellana HOM05D004539 ORTHO05D005482 3.4e-29 134.4 624 28.2
BcaC06g33116 Brassica carinata HOM05D004539 ORTHO05D005482 4.4e-29 134.0 651 26.6
THA.LOC104813189 Tarenaya hassleriana HOM05D004539 ORTHO05D005482 5.8e-29 133.7 722 28.1
vmacro21700 Vaccinium macrocarpon HOM05D004539 ORTHO05D005482 5.8e-29 133.7 723 27.2
FvH4_2g39030 Fragaria vesca HOM05D004539 ORTHO05D005482 9.9e-29 132.9 645 27.0
BcaC06g33276 Brassica carinata HOM05D004539 ORTHO05D005482 1.7e-28 132.1 656 26.7
C07p45610 Brassica napus HOM05D004539 ORTHO05D005482 1.7e-28 132.1 656 26.7
CDE12G0120 Ceratophyllum demersum HOM05D004539 ORTHO05D005482 2.9e-28 131.3 718 27.9
Ca_11952_v3 Cicer arietinum L. HOM05D004539 ORTHO05D005482 2.9e-28 131.3 728 27.3
GSVIVG01009825001 Vitis vinifera HOM05D004539 ORTHO05D005482 2.9e-28 131.3 716 28.2
AT3G49990 Arabidopsis thaliana HOM05D004539 ORTHO05D005482 1.9e-27 128.6 711 27.3
arahy.Tifrunner.gnm1.ann1.ME0SR7 Arachis hypogaea HOM05D004539 ORTHO05D005482 1.9e-27 128.6 727 27.5
Peaxi162Scf00287g00122 Petunia axillaris HOM05D004539 ORTHO05D005482 1.9e-27 128.6 651 27.6
MSTRG.25219 Avicennia marina HOM05D004539 ORTHO05D005482 3.2e-27 127.9 722 27.1
Solyc04g081030.3 Solanum lycopersicum HOM05D004539 ORTHO05D005482 3.2e-27 127.9 649 27.9
Medtr4g022890 Medicago truncatula HOM05D004539 ORTHO05D005482 4.1e-27 127.5 633 27.2
Rhsim06G0026400 Rhododendron simsii HOM05D004539 ORTHO05D005482 4.1e-27 127.5 717 27.1
AUR62014430 Chenopodium quinoa HOM05D004539 ORTHO05D005482 5.4e-27 127.1 633 26.5
AL5G30050 Arabidopsis lyrata HOM05D004539 ORTHO05D005482 7.1e-27 126.7 716 27.4
PSO675G8916 Papaver somniferum HOM05D004539 ORTHO05D005482 7.1e-27 126.7 721 26.2
AUR62042221 Chenopodium quinoa HOM05D004539 ORTHO05D005482 1.2e-26 125.9 719 25.5
FAN15G3183 Fragaria x ananassa HOM05D004539 ORTHO05D005482 1.2e-26 125.9 651 27.0
Atru.chr13.359 Acer truncatum HOM05D004539 ORTHO05D005482 2.1e-26 125.2 641 27.3
Os03g0372700 Oryza sativa ssp. japonica HOM05D004539 ORTHO05D005482 2.7e-26 124.8 565 29.0
Sed0017053 Sechium edule HOM05D004539 ORTHO05D005482 2.7e-26 124.8 719 27.7
arahy.Tifrunner.gnm1.ann1.D3BLAG Arachis hypogaea HOM05D004539 ORTHO05D005482 3.5e-26 124.4 723 27.5
Thhalv10010315m.g Eutrema salsugineum HOM05D004539 ORTHO05D005482 3.5e-26 124.4 716 26.5
SEGI_09517 Sequoiadendron giganteum HOM05D004539 ORTHO05D005482 3.5e-26 124.4 487 32.6
Zm00001eb394100 Zea mays HOM05D004539 ORTHO05D005482 3.5e-26 124.4 487 28.7
Zm00001eb394110 Zea mays HOM05D004539 ORTHO05D005482 3.5e-26 124.4 487 28.7
FAN27G2077 Fragaria x ananassa HOM05D004539 ORTHO05D005482 6.0e-26 123.6 649 26.8
Glyma.17G076700 Glycine max HOM05D004539 ORTHO05D005482 6.0e-26 123.6 717 28.3
Sc02g0002900 Simmondsia chinensis HOM05D004539 ORTHO05D005482 6.0e-26 123.6 720 26.8
AUR62034567 Chenopodium quinoa HOM05D004539 ORTHO05D005482 7.8e-26 123.2 719 25.5
PSO541G3108 Papaver somniferum HOM05D004539 ORTHO05D005482 1.0e-25 122.9 550 28.7
PGR031G2058 Punica granatum HOM05D004539 ORTHO05D005482 1.0e-25 122.9 718 26.7
Aqoxy7G01402 Aquilegia oxysepala HOM05D004539 ORTHO05D005482 1.7e-25 122.1 648 27.3
Zm00001eb018110 Zea mays HOM05D004539 ORTHO05D005482 5.1e-25 120.6 486 28.8
Ah.02g124950 Amaranthus hybridus HOM05D004539 ORTHO05D005482 1.5e-24 119.0 625 26.9
CAN.G851.13 Capsicum annuum HOM05D004539 ORTHO05D005482 1.9e-24 118.6 723 26.6
Psat7g263720 Pisum sativum HOM05D004539 ORTHO05D005482 1.9e-24 118.6 723 25.7
Sopen04g034650 Solanum pennellii HOM05D004539 ORTHO05D005482 1.9e-24 118.6 652 27.1
MELO3C013810.2 Cucumis melo HOM05D004539 ORTHO05D005482 2.5e-24 118.2 714 27.9
AagrBONN_evm.TU.Sc2ySwM_344.1857 Anthoceros agrestis HOM05D004539 ORTHO05D005482 3.3e-24 117.9 718 27.6
CsaV3_3G001200 Cucumis sativus L. HOM05D004539 ORTHO05D005482 3.3e-24 117.9 655 27.8
Sp5g12110 Schrenkiella parvula HOM05D004539 ORTHO05D005482 3.3e-24 117.9 719 27.5
Carub.0005s1635 Capsella rubella HOM05D004539 ORTHO05D005482 4.3e-24 117.5 661 26.9
Lj4A486G10 Lonicera japonica HOM05D004539 ORTHO05D005482 4.3e-24 117.5 741 27.3
TPR.G5561 Trifolium pratense HOM05D004539 ORTHO05D005482 4.3e-24 117.5 712 26.1
Dinv39486 Davidia involucrata HOM05D004539 ORTHO05D005482 5.6e-24 117.1 719 26.3
TAR628G0025 Trochodendron aralioides HOM05D004539 ORTHO05D005482 5.6e-24 117.1 546 28.9
Ciclev10004791m.g Citrus clementina HOM05D004539 ORTHO05D005482 7.3e-24 116.7 722 26.3
Nitab4.5_0012730g0010 Nicotiana tabacum HOM05D004539 ORTHO05D005482 9.6e-24 116.3 720 25.3
Sed0008828 Sechium edule HOM05D004539 ORTHO05D005482 1.2e-23 115.9 722 26.6
EL10Ac1g00555 Beta vulgaris HOM05D004539 ORTHO05D005482 4.7e-23 114.0 728 25.7
Ca_22519_v3 Cicer arietinum L. HOM05D004539 ORTHO05D005482 6.2e-23 113.6 549 29.7
Oeu030391.1 Olea europaea HOM05D004539 ORTHO05D005482 1.1e-22 112.8 550 29.1
FAN20G1687 Fragaria x ananassa HOM05D004539 ORTHO05D005482 1.8e-22 112.1 726 25.2
CARHR159060 Cardamine hirsuta HOM05D004539 ORTHO05D005482 5.2e-22 110.5 650 25.7
HanXRQChr09g0269371 Helianthus annuus HOM05D004539 ORTHO05D005482 6.8e-22 110.2 586 28.0
Ciclev10011488m.g Citrus clementina HOM05D004539 ORTHO05D005482 8.9e-22 109.8 547 28.5
Lj4C484T3 Lonicera japonica HOM05D004539 ORTHO05D005482 1.5e-21 109.0 680 27.4
Cpa.g.sc1191.1 Carica papaya HOM05D004539 ORTHO05D005482 3.2e-19 101.3 425 28.7
PGSC0003DMG400003712 Solanum tuberosum HOM05D004539 ORTHO05D005482 1.2e-18 99.4 664 27.4
SMO367G1003 Selaginella moellendorffii HOM05D004539 ORTHO05D005482 6.0e-18 97.1 166 45.2
Actinidia29798 Actinidia chinensis HOM05D004539 ORTHO05D005482 2.3e-17 95.1 504 29.0
MBI05_g04844_MAGBIO Magnolia biondii HOM05D004539 ORTHO05D005482 3.9e-17 94.4 762 26.8
ClCG05G018590 Citrullus lanatus HOM05D004539 ORTHO05D005482 8.7e-17 93.2 761 25.4
Eucgr.E04075 Eucalyptus grandis HOM05D004539 ORTHO05D005482 1.3e-15 89.4 279 31.2
QL02p010726 Quercus lobata HOM05D004539 ORTHO05D005482 1.6e-15 89.0 425 27.8
FvH4_7g07450 Fragaria vesca HOM05D004539 ORTHO05D005482 1.8e-14 85.5 311 31.5
Lj4C792T1 Lonicera japonica HOM05D004539 ORTHO05D005482 4.0e-14 84.3 330 28.5
CAN.G851.15 Capsicum annuum HOM05D004539 ORTHO05D005482 6.9e-14 83.6 454 27.1
FAN01G2597 Fragaria x ananassa HOM05D004539 ORTHO05D005482 2.0e-13 82.0 165 35.8
Os07g0634300 Oryza sativa ssp. japonica HOM05D004539 ORTHO05D005482 5.8e-13 80.5 166 39.2
Zm00001eb328540 Zea mays HOM05D004539 ORTHO05D005482 5.8e-13 80.5 187 36.9
MCO13G429 Micromonas commoda HOM05D004539 ORTHO05D005482 3.5e-10 71.2 657 26.3
TAR628G0156 Trochodendron aralioides HOM05D004539 ORTHO05D005482 4.6e-10 70.9 139 36.7
FAN06G2453 Fragaria x ananassa HOM05D004539 ORTHO05D005482 1.0e-09 69.7 295 29.5
PRCOL_00001157 Prasinoderma coloniale HOM05D004539 ORTHO05D005482 1.3e-09 69.3 540 26.9
SHI27908 Sapria himalayana HOM05D004539 ORTHO05D005482 1.3e-09 69.3 331 24.2
Cre02.g146000 Chlamydomonas reinhardtii HOM05D004539 ORTHO05D005482 1.9e-08 65.5 280 27.1
AagrBONN_evm.TU.Sc2ySwM_344.3799 Anthoceros agrestis HOM05D004539 ORTHO05D005482 2.5e-08 65.1 163 36.2
Nitab4.5_0006718g0010 Nicotiana tabacum HOM05D004539 ORTHO05D005482 2.5e-08 65.1 147 32.0
FAN10G3704 Fragaria x ananassa HOM05D004539 ORTHO05D005482 3.6e-07 61.2 389 27.5
QL02p010735 Quercus lobata HOM05D004539 ORTHO05D005482 6.2e-07 60.5 164 31.7


User provided reference genes

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