Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23797 Chara braunii HOM05D003094 ORTHO05D003482 1.5e-150 536.2 272 100.0
Mapoly0002s0206 Marchantia polymorpha HOM05D003094 ORTHO05D003482 1.7e-34 150.6 243 42.8
Pp3c18_10090 Physcomitrium patens HOM05D003094 ORTHO05D003482 1.7e-34 150.6 231 42.9
SEGI_02552 Sequoiadendron giganteum HOM05D003094 ORTHO05D003482 2.1e-27 127.1 107 62.6
Os08g0513300 Oryza sativa ssp. japonica HOM05D003094 ORTHO05D003482 1.9e-25 120.6 153 45.1
HPP92_008864 Vanilla planifolia HOM05D003094 ORTHO05D003482 1.9e-25 120.6 107 58.9
Manes.05G133000 Manihot esculenta HOM05D003094 ORTHO05D003482 3.3e-25 119.8 115 54.8
CDE11G0955 Ceratophyllum demersum HOM05D003094 ORTHO05D003482 4.3e-25 119.4 121 53.7
Dinv12225 Davidia involucrata HOM05D003094 ORTHO05D003482 4.3e-25 119.4 161 46.6
Rhsim10G0183200 Rhododendron simsii HOM05D003094 ORTHO05D003482 4.3e-25 119.4 95 63.2
FvH4_6g26830 Fragaria vesca HOM05D003094 ORTHO05D003482 5.6e-25 119.0 98 61.2
FAN14G2495 Fragaria x ananassa HOM05D003094 ORTHO05D003482 5.6e-25 119.0 98 61.2
RcHm_v2.0_Chr2g0128191 Rosa chinensis HOM05D003094 ORTHO05D003482 5.6e-25 119.0 98 61.2
THA.LOC104820380 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 5.6e-25 119.0 112 52.7
MSTRG.4516 Avicennia marina HOM05D003094 ORTHO05D003482 7.3e-25 118.6 109 58.7
PSO017G6706 Papaver somniferum HOM05D003094 ORTHO05D003482 7.3e-25 118.6 93 63.4
PSO063G0897 Papaver somniferum HOM05D003094 ORTHO05D003482 7.3e-25 118.6 93 63.4
Sp3g16360 Schrenkiella parvula HOM05D003094 ORTHO05D003482 7.3e-25 118.6 98 58.2
HPP92_008848 Vanilla planifolia HOM05D003094 ORTHO05D003482 7.3e-25 118.6 107 57.9
Atru.chr9.905 Acer truncatum HOM05D003094 ORTHO05D003482 9.6e-25 118.2 112 54.5
SGA_v2.0_scaffold29G12062 Striga asiatica HOM05D003094 ORTHO05D003482 1.3e-24 117.9 139 51.1
A05p31440 Brassica napus HOM05D003094 ORTHO05D003482 1.6e-24 117.5 151 44.4
BraA05t21983Z Brassica rapa HOM05D003094 ORTHO05D003482 1.6e-24 117.5 151 44.4
Duzib213G0897 Durio zibethinus HOM05D003094 ORTHO05D003482 1.6e-24 117.5 96 60.4
TWI60G1358 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 1.6e-24 117.5 136 48.5
Aa31LG8G5090 Aethionema arabicum HOM05D003094 ORTHO05D003482 2.1e-24 117.1 104 55.8
AL3G31470 Arabidopsis lyrata HOM05D003094 ORTHO05D003482 2.1e-24 117.1 106 55.7
AT3G18240 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 2.1e-24 117.1 106 55.7
Carub.0003s1800 Capsella rubella HOM05D003094 ORTHO05D003482 2.1e-24 117.1 106 55.7
CiPaw.16G089100 Carya illinoinensis HOM05D003094 ORTHO05D003482 2.1e-24 117.1 164 45.7
FAN05G2182 Fragaria x ananassa HOM05D003094 ORTHO05D003482 2.1e-24 117.1 120 51.7
Prupe.5G224900 Prunus persica HOM05D003094 ORTHO05D003482 2.1e-24 117.1 110 57.3
GSVIVG01008338001 Vitis vinifera HOM05D003094 ORTHO05D003482 2.1e-24 117.1 152 47.4
BcaC05g28647 Brassica carinata HOM05D003094 ORTHO05D003482 2.8e-24 116.7 151 43.7
C05p47760 Brassica napus HOM05D003094 ORTHO05D003482 2.8e-24 116.7 151 43.7
BolC5t33491H Brassica oleracea HOM05D003094 ORTHO05D003482 2.8e-24 116.7 151 43.7
FAN02G1016 Fragaria x ananassa HOM05D003094 ORTHO05D003482 2.8e-24 116.7 120 51.7
Sabra15G0041200 Salix brachista HOM05D003094 ORTHO05D003482 2.8e-24 116.7 113 54.0
MELO3C017325.2 Cucumis melo HOM05D003094 ORTHO05D003482 3.6e-24 116.3 128 51.6
Oeu052057.1 Olea europaea HOM05D003094 ORTHO05D003482 3.6e-24 116.3 129 52.7
Sed0020442 Sechium edule HOM05D003094 ORTHO05D003482 3.6e-24 116.3 124 51.6
Cpa.g.sc51.5 Carica papaya HOM05D003094 ORTHO05D003482 4.8e-24 115.9 126 50.0
VMungo0251G1973 Vigna mungo HOM05D003094 ORTHO05D003482 4.8e-24 115.9 137 48.2
Actinidia19943 Actinidia chinensis HOM05D003094 ORTHO05D003482 6.2e-24 115.5 152 44.7
ATR0757G079 Amborella trichopoda HOM05D003094 ORTHO05D003482 6.2e-24 115.5 152 44.7
AT4G21460 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 6.2e-24 115.5 106 54.7
CSS0029576 Camellia sinensis var. sinensis HOM05D003094 ORTHO05D003482 6.2e-24 115.5 107 57.0
Cfa019732 Carpinus fangiana HOM05D003094 ORTHO05D003482 6.2e-24 115.5 113 54.0
CsaV3_1G004020 Cucumis sativus L. HOM05D003094 ORTHO05D003482 6.2e-24 115.5 120 52.5
MD14G1229900 Malus domestica HOM05D003094 ORTHO05D003482 6.2e-24 115.5 109 56.0
vmacro07219 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 6.2e-24 115.5 181 43.6
Zm00001eb143930 Zea mays HOM05D003094 ORTHO05D003482 6.2e-24 115.5 153 44.4
Actinidia36579 Actinidia chinensis HOM05D003094 ORTHO05D003482 8.1e-24 115.2 98 58.2
Lsat_1_v5_gn_2_64400 Lactuca sativa HOM05D003094 ORTHO05D003482 8.1e-24 115.2 137 47.4
Phvul.002G182800 Phaseolus vulgaris HOM05D003094 ORTHO05D003482 8.1e-24 115.2 137 48.2
Psat7g083520 Pisum sativum HOM05D003094 ORTHO05D003482 8.1e-24 115.2 133 48.9
ClCG06G014600 Citrullus lanatus HOM05D003094 ORTHO05D003482 1.1e-23 114.8 126 51.6
Gohir.D13G152004 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.1e-23 114.8 106 56.6
Gorai.013G169300 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.1e-23 114.8 106 56.6
Lj9A424T34 Lonicera japonica HOM05D003094 ORTHO05D003482 1.1e-23 114.8 179 40.2
QL10p026547 Quercus lobata HOM05D003094 ORTHO05D003482 1.1e-23 114.8 152 46.1
Lalb_Chr08g0242311 Lupinus albus HOM05D003094 ORTHO05D003482 1.4e-23 114.4 137 47.4
MBI16_g44830_MAGBIO Magnolia biondii HOM05D003094 ORTHO05D003482 1.4e-23 114.4 151 44.4
PGR044G0078 Punica granatum HOM05D003094 ORTHO05D003482 1.4e-23 114.4 118 51.7
TAR374G0309 Trochodendron aralioides HOM05D003094 ORTHO05D003482 1.4e-23 114.4 95 58.9
Haze_18734 Corylus avellana HOM05D003094 ORTHO05D003482 1.8e-23 114.0 146 46.6
Migut.D00778 Erythranthe guttata HOM05D003094 ORTHO05D003482 1.8e-23 114.0 138 47.8
Gohir.D13G151300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.8e-23 114.0 106 56.6
Gorai.013G170500 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.8e-23 114.0 106 56.6
Nitab4.5_0001986g0070 Nicotiana tabacum HOM05D003094 ORTHO05D003482 1.8e-23 114.0 115 53.0
Nitab4.5_0004955g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 1.8e-23 114.0 115 52.2
Thhalv10020806m.g Eutrema salsugineum HOM05D003094 ORTHO05D003482 2.4e-23 113.6 98 56.1
Sopen03g038060 Solanum pennellii HOM05D003094 ORTHO05D003482 2.4e-23 113.6 131 48.1
PGSC0003DMG402005733 Solanum tuberosum HOM05D003094 ORTHO05D003482 2.4e-23 113.6 131 48.1
CARHR093590 Cardamine hirsuta HOM05D003094 ORTHO05D003482 3.1e-23 113.2 155 44.5
Cc04_g06860 Coffea canephora HOM05D003094 ORTHO05D003482 3.1e-23 113.2 98 59.2
Eucgr.K02236 Eucalyptus grandis HOM05D003094 ORTHO05D003482 3.1e-23 113.2 123 51.2
Peaxi162Scf00683g00159 Petunia axillaris HOM05D003094 ORTHO05D003482 3.1e-23 113.2 115 53.0
arahy.Tifrunner.gnm1.ann1.2IG2A1 Arachis hypogaea HOM05D003094 ORTHO05D003482 4.0e-23 112.8 133 48.1
arahy.Tifrunner.gnm1.ann1.D1K70W Arachis hypogaea HOM05D003094 ORTHO05D003482 4.0e-23 112.8 133 48.1
CAN.G1129.13 Capsicum annuum HOM05D003094 ORTHO05D003482 4.0e-23 112.8 131 48.1
Glyma.08G094700 Glycine max HOM05D003094 ORTHO05D003482 4.0e-23 112.8 98 58.2
Thecc.07G091700 Theobroma cacao HOM05D003094 ORTHO05D003482 4.0e-23 112.8 115 52.2
Ciclev10020325m.g Citrus clementina HOM05D003094 ORTHO05D003482 5.3e-23 112.5 98 58.2
SalBow7G3604 Salvia bowleyana HOM05D003094 ORTHO05D003482 5.3e-23 112.5 100 60.0
Ca_11586_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 6.9e-23 112.1 152 44.1
MD06G1220500 Malus domestica HOM05D003094 ORTHO05D003482 6.9e-23 112.1 140 47.9
TPR.G5116 Trifolium pratense HOM05D003094 ORTHO05D003482 9.0e-23 111.7 133 48.1
CANSAT80G1577 Cannabis sativa HOM05D003094 ORTHO05D003482 1.2e-22 111.3 151 43.7
ECA238G4750 Erigeron canadensis HOM05D003094 ORTHO05D003482 1.2e-22 111.3 214 37.4
Lj4g0013095 Lotus japonicus HOM05D003094 ORTHO05D003482 1.2e-22 111.3 115 53.0
Hund11930 Selenicereus undatus HOM05D003094 ORTHO05D003482 1.2e-22 111.3 140 46.4
Solyc03g119170.3 Solanum lycopersicum HOM05D003094 ORTHO05D003482 1.2e-22 111.3 131 47.3
Potri.015G044100 Populus trichocarpa HOM05D003094 ORTHO05D003482 1.5e-22 110.9 149 44.3
COL.COLO4_27184 Corchorus olitorius HOM05D003094 ORTHO05D003482 2.0e-22 110.5 150 43.3
HanXRQChr14g0446571 Helianthus annuus HOM05D003094 ORTHO05D003482 2.0e-22 110.5 227 36.6
Nitab4.5_0008639g0020 Nicotiana tabacum HOM05D003094 ORTHO05D003482 2.0e-22 110.5 115 51.3
Glyma.05G139400 Glycine max HOM05D003094 ORTHO05D003482 3.4e-22 109.8 120 50.0
Gohir.A13G146300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 3.4e-22 109.8 106 54.7
Gohir.A13G146900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 3.4e-22 109.8 149 45.6
Nitab4.5_0004028g0060 Nicotiana tabacum HOM05D003094 ORTHO05D003482 4.5e-22 109.4 115 50.4
unitig_21.g20424 Utricularia gibba HOM05D003094 ORTHO05D003482 9.9e-22 108.2 142 46.5
AUR62040348 Chenopodium quinoa HOM05D003094 ORTHO05D003482 1.7e-21 107.5 136 45.6
Sc04g0003380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 1.7e-21 107.5 128 46.9
AUR62042498 Chenopodium quinoa HOM05D003094 ORTHO05D003482 2.2e-21 107.1 136 45.6
Nitab4.5_0008678g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 3.8e-21 106.3 118 48.3
EL10Ac7g16627 Beta vulgaris HOM05D003094 ORTHO05D003482 1.1e-20 104.8 113 48.7
EL10Ac4g10181 Beta vulgaris HOM05D003094 ORTHO05D003482 1.4e-20 104.4 113 48.7
SMO367G0461 Selaginella moellendorffii HOM05D003094 ORTHO05D003482 2.1e-19 100.5 136 41.9
TAR374G0733 Trochodendron aralioides HOM05D003094 ORTHO05D003482 6.2e-16 89.0 67 62.7
Prupe.4G184600 Prunus persica HOM05D003094 ORTHO05D003482 5.3e-15 85.9 79 57.0
Oeu010081.1 Olea europaea HOM05D003094 ORTHO05D003482 1.9e-12 77.4 99 46.5
TAR622G0867 Trochodendron aralioides HOM05D003094 ORTHO05D009164 1.9e-09 67.4 130 34.6
Gohir.A06G136104 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.1e-07 61.6 98 41.8
Oeu010083.1 Olea europaea HOM05D003094 ORTHO05D003482 3.4e-06 56.6 54 57.4


User provided reference genes

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