Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 0.0e+00 1086.6 549 100.0
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 8.0e-196 687.6 428 76.9
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 2.3e-195 686.0 436 75.9
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 8.8e-195 684.1 431 75.6
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 1.2e-194 683.7 430 75.6
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.2e-194 683.7 429 76.5
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 2.0e-194 682.9 430 76.0
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 2.0e-194 682.9 428 76.6
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.6e-194 682.6 429 76.5
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 3.4e-194 682.2 430 76.0
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 4.4e-194 681.8 429 75.1
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 5.7e-194 681.4 429 74.8
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 7.5e-194 681.0 427 75.9
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 9.8e-194 680.6 410 79.0
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 9.8e-194 680.6 429 75.5
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 9.8e-194 680.6 431 75.4
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 9.8e-194 680.6 437 75.3
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 1.3e-193 680.2 420 78.1
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 1.3e-193 680.2 428 76.2
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 1.3e-193 680.2 430 76.0
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 1.3e-193 680.2 433 75.5
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 1.7e-193 679.9 447 73.4
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 2.2e-193 679.5 429 76.0
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 2.2e-193 679.5 430 74.9
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 2.8e-193 679.1 423 76.1
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 2.8e-193 679.1 420 77.1
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 3.7e-193 678.7 434 74.4
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 3.7e-193 678.7 429 74.6
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 4.8e-193 678.3 398 79.6
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 4.8e-193 678.3 430 74.9
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 4.8e-193 678.3 419 77.6
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 6.3e-193 677.9 411 77.9
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 6.3e-193 677.9 426 76.8
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 6.3e-193 677.9 430 75.8
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 8.3e-193 677.6 426 76.8
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 1.1e-192 677.2 399 78.9
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 1.4e-192 676.8 425 76.2
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 1.4e-192 676.8 425 75.8
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 1.4e-192 676.8 427 74.7
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 1.8e-192 676.4 432 74.8
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.8e-192 676.4 425 75.1
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 3.1e-192 675.6 434 74.4
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 3.1e-192 675.6 418 76.6
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 4.1e-192 675.2 410 78.3
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 4.1e-192 675.2 410 78.5
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 4.1e-192 675.2 410 78.5
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 4.1e-192 675.2 429 73.9
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 4.1e-192 675.2 431 74.2
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 5.4e-192 674.9 423 76.4
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 7.0e-192 674.5 430 75.1
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 7.0e-192 674.5 476 69.5
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 7.0e-192 674.5 426 76.3
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 9.1e-192 674.1 431 73.8
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 9.1e-192 674.1 429 75.3
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 1.2e-191 673.7 430 74.4
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 1.2e-191 673.7 398 78.6
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 1.2e-191 673.7 424 75.7
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 1.2e-191 673.7 421 76.2
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 1.2e-191 673.7 406 77.6
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 1.2e-191 673.7 423 77.1
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 1.6e-191 673.3 433 73.0
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 2.7e-191 672.5 415 76.1
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 4.5e-191 671.8 431 73.3
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 7.7e-191 671.0 427 75.6
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.0e-190 670.6 483 67.9
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 1.3e-190 670.2 426 75.1
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 1.3e-190 670.2 429 76.2
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.7e-190 669.8 431 73.8
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 2.9e-190 669.1 418 76.3
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 3.8e-190 668.7 426 75.4
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 3.8e-190 668.7 419 75.9
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 3.8e-190 668.7 421 75.1
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 3.8e-190 668.7 406 77.6
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 5.0e-190 668.3 430 73.7
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 6.6e-190 667.9 417 76.7
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.1e-189 667.2 472 69.1
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 1.9e-189 666.4 422 75.6
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 1.9e-189 666.4 415 76.4
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 1.9e-189 666.4 417 76.7
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 4.2e-189 665.2 420 76.4
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 7.2e-189 664.5 422 74.2
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 1.2e-188 663.7 422 74.9
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 1.2e-188 663.7 422 74.9
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 1.6e-188 663.3 422 74.2
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 2.1e-188 662.9 436 73.4
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 2.8e-188 662.5 422 75.4
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 6.1e-188 661.4 423 74.0
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 1.0e-187 660.6 422 73.7
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 1.8e-187 659.8 386 79.3
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 1.8e-187 659.8 386 79.5
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 1.8e-187 659.8 386 79.3
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 1.8e-187 659.8 422 74.9
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 2.3e-187 659.4 386 79.3
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 3.0e-187 659.1 386 79.3
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 4.0e-187 658.7 423 73.8
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 6.8e-187 657.9 387 79.3
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 6.8e-187 657.9 386 79.0
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 1.5e-186 656.8 428 72.4
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 2.6e-186 656.0 417 74.8
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 4.4e-186 655.2 471 67.9
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 2.7e-183 646.0 455 69.2
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 1.7e-182 643.3 389 77.1
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 1.0e-179 634.0 430 70.5
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 2.3e-174 616.3 390 74.4
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 2.8e-172 609.4 429 69.5
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 6.4e-169 598.2 386 73.8
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 1.4e-168 597.0 403 68.5
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 1.3e-166 590.5 403 66.7
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 6.4e-161 571.6 390 65.9
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 5.1e-150 535.4 428 64.0
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 1.6e-148 530.4 341 74.5
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.0e-147 525.8 433 61.0
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 2.4e-136 490.0 286 81.1
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 7.1e-136 488.4 286 81.1
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 2.6e-130 469.9 290 75.2
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 8.4e-121 438.3 276 72.5
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.8e-94 350.9 237 69.6
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 5.5e-88 329.3 213 70.4
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 3.5e-74 283.5 172 79.1
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.2e-53 215.3 195 55.9
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 5.8e-53 213.0 130 74.6
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.2e-50 205.3 138 72.5
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.6e-49 199.5 129 74.4
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 1.4e-38 165.2 143 61.5
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 4.4e-29 133.7 94 71.3
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 5.1e-25 120.2 107 54.2
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 2.1e-23 114.8 105 58.1
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 1.4e-11 75.5 63 55.6
Pp3c3_1820 Physcomitrium patens HOM05D000776 ORTHO05D001624 1.6e-07 62.0 150 30.7
Lalb_Chr05g0224991 Lupinus albus HOM05D000776 ORTHO05D001624 2.8e-07 61.2 179 29.1
SGA_v2.0_scaffold144G35964 Striga asiatica HOM05D000776 ORTHO05D001624 1.1e-06 59.3 179 26.3
Migut.E01129 Erythranthe guttata HOM05D000776 ORTHO05D001624 1.8e-06 58.5 158 27.2
Haze_27503 Corylus avellana HOM05D000776 ORTHO05D002281 3.1e-06 57.8 172 27.3
SEGI_05924 Sequoiadendron giganteum HOM05D000776 ORTHO05D001624 9.0e-06 56.2 128 29.7


User provided reference genes

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