Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23678 Chara braunii HOM05D004023 ORTHO05D004681 5.5e-113 411.0 209 100.0
Mapoly0023s0080 Marchantia polymorpha HOM05D004023 ORTHO05D004681 3.5e-19 99.4 207 36.2
MSTRG.18474 Avicennia marina HOM05D004023 ORTHO05D004681 4.5e-14 82.4 209 30.1
unitig_0.g313 Utricularia gibba HOM05D004023 ORTHO05D004681 4.5e-14 82.4 186 33.9
Hma1.2p1_1711F.1_g298750 Hydrangea macrophylla HOM05D004023 ORTHO05D004681 5.8e-14 82.0 208 30.8
GSVIVG01037415001 Vitis vinifera HOM05D004023 ORTHO05D004681 5.8e-14 82.0 209 29.2
Aqoxy1G00042 Aquilegia oxysepala HOM05D004023 ORTHO05D004681 1.0e-13 81.3 181 33.1
Rhsim13G0202100 Rhododendron simsii HOM05D004023 ORTHO05D004681 1.0e-13 81.3 211 29.9
TAR369G0443 Trochodendron aralioides HOM05D004023 ORTHO05D004681 1.0e-13 81.3 206 30.1
MBI13_g41748_MAGBIO Magnolia biondii HOM05D004023 ORTHO05D004681 1.3e-13 80.9 181 32.6
SEGI_14760 Sequoiadendron giganteum HOM05D004023 ORTHO05D004681 1.7e-13 80.5 210 28.6
Cc01_g06740 Coffea canephora HOM05D004023 ORTHO05D004681 2.2e-13 80.1 211 30.3
SGA_v2.0_scaffold29G12111 Striga asiatica HOM05D004023 ORTHO05D004681 6.5e-13 78.6 221 31.2
AUR62003487 Chenopodium quinoa HOM05D004023 ORTHO05D004681 8.4e-13 78.2 204 29.9
AUR62017796 Chenopodium quinoa HOM05D004023 ORTHO05D004681 8.4e-13 78.2 206 30.1
PSO384G4677 Papaver somniferum HOM05D004023 ORTHO05D004681 1.4e-12 77.4 181 32.0
Hund12723 Selenicereus undatus HOM05D004023 ORTHO05D004681 1.4e-12 77.4 206 30.6
AagrBONN_evm.TU.Sc2ySwM_117.2238 Anthoceros agrestis HOM05D004023 ORTHO05D004681 1.9e-12 77.0 185 32.4
vmacro04098 Vaccinium macrocarpon HOM05D004023 ORTHO05D004681 1.9e-12 77.0 211 29.4
AL3G43670 Arabidopsis lyrata HOM05D004023 ORTHO05D004681 2.5e-12 76.6 188 30.9
CDE05G3056 Ceratophyllum demersum HOM05D004023 ORTHO05D004681 3.2e-12 76.3 179 32.4
Carub.0003s2716 Capsella rubella HOM05D004023 ORTHO05D004681 5.5e-12 75.5 191 29.3
Actinidia24483 Actinidia chinensis HOM05D004023 ORTHO05D004681 7.1e-12 75.1 210 29.0
Ah.03g147260 Amaranthus hybridus HOM05D004023 ORTHO05D004681 7.1e-12 75.1 202 28.7
ATR1096G005 Amborella trichopoda HOM05D004023 ORTHO05D004681 7.1e-12 75.1 196 29.6
PGSC0003DMG400004653 Solanum tuberosum HOM05D004023 ORTHO05D004681 9.3e-12 74.7 209 29.2
CDE05G0867 Ceratophyllum demersum HOM05D004023 ORTHO05D004681 1.2e-11 74.3 180 32.2
Eucgr.J00649 Eucalyptus grandis HOM05D004023 ORTHO05D004681 1.2e-11 74.3 192 31.2
PSO339G3635 Papaver somniferum HOM05D004023 ORTHO05D004681 1.2e-11 74.3 210 31.4
AT2G06025 Arabidopsis thaliana HOM05D004023 ORTHO05D004681 1.6e-11 73.9 188 29.8
CARHR103710 Cardamine hirsuta HOM05D004023 ORTHO05D004681 1.6e-11 73.9 192 30.7
TAR383G0448 Trochodendron aralioides HOM05D004023 ORTHO05D004681 1.6e-11 73.9 178 33.1
PGR119G0815 Punica granatum HOM05D004023 ORTHO05D004681 2.1e-11 73.6 191 28.3
Migut.D00690 Erythranthe guttata HOM05D004023 ORTHO05D004681 2.7e-11 73.2 226 29.2
MBI13_g42818_MAGBIO Magnolia biondii HOM05D004023 ORTHO05D004681 2.7e-11 73.2 183 30.6
Solyc12g099940.2 Solanum lycopersicum HOM05D004023 ORTHO05D004681 2.7e-11 73.2 209 29.2
Sopen12g034560 Solanum pennellii HOM05D004023 ORTHO05D004681 2.7e-11 73.2 209 29.2
EL10Ac6g15385 Beta vulgaris HOM05D004023 ORTHO05D004681 4.6e-11 72.4 203 30.5
CAN.G484.8 Capsicum annuum HOM05D004023 ORTHO05D004681 4.6e-11 72.4 207 29.5
BcaB06g26883 Brassica carinata HOM05D004023 ORTHO05D004681 6.1e-11 72.0 178 30.3
BolC7t41351H Brassica oleracea HOM05D004023 ORTHO05D004681 7.9e-11 71.6 178 30.3
DCAR_006328 Daucus carota HOM05D004023 ORTHO05D004681 7.9e-11 71.6 183 30.1
Nitab4.5_0001925g0260 Nicotiana tabacum HOM05D004023 ORTHO05D004681 7.9e-11 71.6 179 30.7
BcaC06g35952 Brassica carinata HOM05D004023 ORTHO05D004681 1.0e-10 71.2 178 30.3
A07p06280 Brassica napus HOM05D004023 ORTHO05D004681 3.0e-10 69.7 185 30.8
Sp3g24610 Schrenkiella parvula HOM05D004023 ORTHO05D004681 3.0e-10 69.7 191 29.3
Aa31sc133G50 Aethionema arabicum HOM05D004023 ORTHO05D004681 3.9e-10 69.3 178 30.9
Glyma.15G177500 Glycine max HOM05D004023 ORTHO05D004681 3.9e-10 69.3 196 29.1
Peaxi162Scf00554g00920 Petunia axillaris HOM05D004023 ORTHO05D004681 3.9e-10 69.3 193 27.5
BraA07t28423Z Brassica rapa HOM05D004023 ORTHO05D004681 5.1e-10 68.9 179 30.2
CSS0012197 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 5.1e-10 68.9 178 30.3
HanXRQChr14g0431991 Helianthus annuus HOM05D004023 ORTHO05D004681 5.1e-10 68.9 209 29.2
THA.LOC104826588 Tarenaya hassleriana HOM05D004023 ORTHO05D004681 5.1e-10 68.9 187 30.5
Psat1g134240 Pisum sativum HOM05D004023 ORTHO05D004681 6.7e-10 68.6 199 28.6
Aqoxy7G01044 Aquilegia oxysepala HOM05D004023 ORTHO05D004681 8.7e-10 68.2 178 29.8
CiPaw.03G206900 Carya illinoinensis HOM05D004023 ORTHO05D004681 1.1e-09 67.8 178 30.3
arahy.Tifrunner.gnm1.ann1.KW18SN Arachis hypogaea HOM05D004023 ORTHO05D004681 1.5e-09 67.4 178 30.3
Gorai.010G088100 Gossypium raimondii HOM05D004023 ORTHO05D004681 1.5e-09 67.4 177 31.6
SMO200G0269 Selaginella moellendorffii HOM05D004023 ORTHO05D004681 1.5e-09 67.4 169 29.6
CSS0007502 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 2.5e-09 66.6 190 28.4
Glyma.09G069500 Glycine max HOM05D004023 ORTHO05D004681 2.5e-09 66.6 181 29.3
HanXRQChr09g0237831 Helianthus annuus HOM05D004023 ORTHO05D004681 2.5e-09 66.6 179 31.8
QL11p000695 Quercus lobata HOM05D004023 ORTHO05D004681 2.5e-09 66.6 178 28.7
ATR0598G151 Amborella trichopoda HOM05D004023 ORTHO05D004681 3.3e-09 66.2 205 27.3
Eucgr.C00816 Eucalyptus grandis HOM05D004023 ORTHO05D004681 3.3e-09 66.2 191 28.8
Gohir.A06G076200 Gossypium hirsutum HOM05D004023 ORTHO05D004681 3.3e-09 66.2 188 30.3
Lsat_1_v5_gn_7_35101 Lactuca sativa HOM05D004023 ORTHO05D004681 3.3e-09 66.2 179 31.3
Medtr2g041620 Medicago truncatula HOM05D004023 ORTHO05D004681 3.3e-09 66.2 178 29.8
Prupe.7G199400 Prunus persica HOM05D004023 ORTHO05D004681 3.3e-09 66.2 185 29.2
Potri.006G142100 Populus trichocarpa HOM05D004023 ORTHO05D004681 5.7e-09 65.5 179 29.6
unitig_60.g25636 Utricularia gibba HOM05D004023 ORTHO05D004681 5.7e-09 65.5 177 29.9
Thhalv10002632m.g Eutrema salsugineum HOM05D004023 ORTHO05D004681 7.4e-09 65.1 192 28.1
Actinidia29930 Actinidia chinensis HOM05D004023 ORTHO05D004681 9.7e-09 64.7 198 30.3
CSS0006992 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 1.3e-08 64.3 191 28.3
CSS0019806 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 1.6e-08 63.9 190 27.9
EL10Ac8g19063 Beta vulgaris HOM05D004023 ORTHO05D004681 2.2e-08 63.5 165 26.1
TPR.G28584 Trifolium pratense HOM05D004023 ORTHO05D004681 2.2e-08 63.5 179 29.1
VMungo1309G2832 Vigna mungo HOM05D004023 ORTHO05D004681 2.8e-08 63.2 186 30.1
Lalb_Chr08g0232581 Lupinus albus HOM05D004023 ORTHO05D004681 3.7e-08 62.8 178 29.2
Sabra06G0111200 Salix brachista HOM05D004023 ORTHO05D004681 3.7e-08 62.8 178 30.3
Nn8g38657 Nelumbo nucifera HOM05D004023 ORTHO05D004681 4.8e-08 62.4 183 27.9
PGSC0003DMG400027761 Solanum tuberosum HOM05D004023 ORTHO05D004681 4.8e-08 62.4 178 29.2
CsaV3_1G041000 Cucumis sativus L. HOM05D004023 ORTHO05D004681 6.3e-08 62.0 180 30.0
Pp3c12_9920 Physcomitrium patens HOM05D004023 ORTHO05D004681 6.3e-08 62.0 165 32.1
Cc06_g12120 Coffea canephora HOM05D004023 ORTHO05D004681 1.1e-07 61.2 178 29.2
ECA240G3187 Erigeron canadensis HOM05D004023 ORTHO05D004681 1.4e-07 60.8 179 31.3
Nitab4.5_0005767g0010 Nicotiana tabacum HOM05D004023 ORTHO05D004681 1.4e-07 60.8 193 25.9
Atru.chr7.1700 Acer truncatum HOM05D004023 ORTHO05D004681 1.8e-07 60.5 178 29.2
Migut.L01563 Erythranthe guttata HOM05D004023 ORTHO05D004681 1.8e-07 60.5 204 27.0
TWI63G1612 Tripterygium wilfordii HOM05D004023 ORTHO05D004681 1.8e-07 60.5 178 28.1
Cfa002993 Carpinus fangiana HOM05D004023 ORTHO05D004681 2.4e-07 60.1 180 28.9
Phvul.009G227400 Phaseolus vulgaris HOM05D004023 ORTHO05D004681 2.4e-07 60.1 179 27.9
Ciclev10009135m.g Citrus clementina HOM05D004023 ORTHO05D004681 3.1e-07 59.7 178 30.9
Haze_26009 Corylus avellana HOM05D004023 ORTHO05D004681 4.1e-07 59.3 180 28.9
Sc18g0002510 Simmondsia chinensis HOM05D004023 ORTHO05D004681 4.1e-07 59.3 186 25.3
TWI34G0375 Tripterygium wilfordii HOM05D004023 ORTHO05D004681 4.1e-07 59.3 177 26.0
Dinv42390 Davidia involucrata HOM05D004023 ORTHO05D004681 5.3e-07 58.9 187 28.9
MD02G1091000 Malus domestica HOM05D004023 ORTHO05D004681 6.9e-07 58.5 190 26.8
Nn7g37124 Nelumbo nucifera HOM05D004023 ORTHO05D004681 9.0e-07 58.2 114 34.2
CBR_g2838 Chara braunii HOM05D018292 ORTHO05D022305 1.2e-06 57.8 40 67.5
Lj6g0013866 Lotus japonicus HOM05D004023 ORTHO05D004681 1.2e-06 57.8 180 27.2
EL10Ac8g18867 Beta vulgaris HOM05D005733 ORTHO05D007442 1.5e-06 57.4 174 31.6
AUR62028938 Chenopodium quinoa HOM05D004023 ORTHO05D004681 1.5e-06 57.4 178 26.4
MD15G1217100 Malus domestica HOM05D004023 ORTHO05D004681 1.5e-06 57.4 190 27.4
Solyc05g025890.3 Solanum lycopersicum HOM05D004023 ORTHO05D004681 1.5e-06 57.4 179 26.8
Ca_23416_v3 Cicer arietinum L. HOM05D004023 ORTHO05D004681 2.0e-06 57.0 181 26.5
Nitab4.5_0000024g0190 Nicotiana tabacum HOM05D004023 ORTHO05D004681 2.0e-06 57.0 201 27.4
Thecc.09G077600 Theobroma cacao HOM05D004023 ORTHO05D004681 2.0e-06 57.0 177 28.8
Gohir.D06G075200 Gossypium hirsutum HOM05D004023 ORTHO05D004681 2.6e-06 56.6 105 36.2
AUR62025247 Chenopodium quinoa HOM05D004023 ORTHO05D004681 3.4e-06 56.2 178 25.8
GSVIVG01015086001 Vitis vinifera HOM05D004023 ORTHO05D004681 3.4e-06 56.2 178 28.1
Peaxi162Scf00062g00920 Petunia axillaris HOM05D004023 ORTHO05D004681 4.5e-06 55.8 145 31.0
arahy.Tifrunner.gnm1.ann1.XHC94G Arachis hypogaea HOM05D004023 ORTHO05D004681 5.9e-06 55.5 178 25.3
Nitab4.5_0011805g0030 Nicotiana tabacum HOM05D004023 ORTHO05D004681 5.9e-06 55.5 100 33.0
Sopen05g021320 Solanum pennellii HOM05D004023 ORTHO05D004681 7.7e-06 55.1 181 27.1
C07p09330 Brassica napus HOM05D004023 ORTHO05D004681 1.0e-05 54.7 100 34.0


User provided reference genes

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