Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23450 Chara braunii HOM05D000246 ORTHO05D005907 1.6e-189 666.0 355 100.0
Pp3c6_17230 Physcomitrium patens HOM05D000246 ORTHO05D005907 2.6e-147 525.8 321 78.5
Mapoly0149s0014 Marchantia polymorpha HOM05D000246 ORTHO05D005907 6.4e-146 521.2 320 76.2
SMO201G0006 Selaginella moellendorffii HOM05D000246 ORTHO05D005907 1.2e-144 516.9 320 76.2
Pp3c25_2440 Physcomitrium patens HOM05D000246 ORTHO05D005907 4.6e-144 515.0 322 75.2
SEGI_02915 Sequoiadendron giganteum HOM05D000246 ORTHO05D005907 5.3e-140 501.5 320 74.7
Prupe.1G177100 Prunus persica HOM05D000246 ORTHO05D005907 6.4e-138 494.6 320 74.4
Haze_11715 Corylus avellana HOM05D000246 ORTHO05D005907 1.1e-137 493.8 320 74.1
Dinv22710 Davidia involucrata HOM05D000246 ORTHO05D005907 1.1e-137 493.8 320 74.4
MBI07_g06132_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D005907 1.1e-137 493.8 320 74.4
Lj3C235G1 Lonicera japonica HOM05D000246 ORTHO05D005907 1.4e-137 493.4 316 74.7
Hma1.2p1_3184F.1_g333720 Hydrangea macrophylla HOM05D000246 ORTHO05D005907 2.4e-137 492.7 323 73.7
Cfa008706 Carpinus fangiana HOM05D000246 ORTHO05D005907 3.2e-137 492.3 320 74.1
PGR142G3194 Punica granatum HOM05D000246 ORTHO05D005907 4.2e-137 491.9 320 73.8
TWI53G1869 Tripterygium wilfordii HOM05D000246 ORTHO05D005907 4.2e-137 491.9 316 74.4
RcHm_v2.0_Chr4g0410381 Rosa chinensis HOM05D000246 ORTHO05D005907 5.4e-137 491.5 316 75.3
MD04G1027700 Malus domestica HOM05D000246 ORTHO05D005907 7.1e-137 491.1 320 73.4
Thecc.04G186400 Theobroma cacao HOM05D000246 ORTHO05D005907 9.3e-137 490.7 320 73.4
TWI09G0257 Tripterygium wilfordii HOM05D000246 ORTHO05D005907 9.3e-137 490.7 316 74.7
Eucgr.H00462 Eucalyptus grandis HOM05D000246 ORTHO05D005907 1.6e-136 490.0 317 74.1
Manes.01G119800 Manihot esculenta HOM05D000246 ORTHO05D005907 1.6e-136 490.0 317 73.5
Peaxi162Scf00378g00062 Petunia axillaris HOM05D000246 ORTHO05D005907 1.6e-136 490.0 316 74.4
GSVIVG01031659001 Vitis vinifera HOM05D000246 ORTHO05D005907 1.6e-136 490.0 320 73.8
ClCG07G015740 Citrullus lanatus HOM05D000246 ORTHO05D005907 2.1e-136 489.6 320 73.1
CiPaw.01G109200 Carya illinoinensis HOM05D000246 ORTHO05D005907 2.7e-136 489.2 320 73.4
CsaV3_4G003350 Cucumis sativus L. HOM05D000246 ORTHO05D005907 2.7e-136 489.2 320 72.8
Sc19g0007630 Simmondsia chinensis HOM05D000246 ORTHO05D005907 2.7e-136 489.2 320 73.8
Sopen12g033430 Solanum pennellii HOM05D000246 ORTHO05D005907 3.5e-136 488.8 321 73.2
PGSC0003DMG400004583 Solanum tuberosum HOM05D000246 ORTHO05D005907 3.5e-136 488.8 321 73.2
DCAR_004354 Daucus carota HOM05D000246 ORTHO05D005907 4.6e-136 488.4 320 73.1
Gohir.D05G327500 Gossypium hirsutum HOM05D000246 ORTHO05D005907 4.6e-136 488.4 320 72.8
Glyma.02G097300 Glycine max HOM05D000246 ORTHO05D005907 7.8e-136 487.6 320 73.8
PSO675G5278 Papaver somniferum HOM05D000246 ORTHO05D005907 7.8e-136 487.6 321 72.9
Phvul.008G017300 Phaseolus vulgaris HOM05D000246 ORTHO05D005907 1.0e-135 487.3 320 73.4
Gorai.009G351400 Gossypium raimondii HOM05D000246 ORTHO05D005907 1.3e-135 486.9 320 72.5
Nn1g09763 Nelumbo nucifera HOM05D000246 ORTHO05D005907 1.3e-135 486.9 320 73.1
Nitab4.5_0000978g0210 Nicotiana tabacum HOM05D000246 ORTHO05D005907 1.3e-135 486.9 316 73.4
PSO017G6996 Papaver somniferum HOM05D000246 ORTHO05D005907 1.3e-135 486.9 321 72.9
VMungo1383G1353 Vigna mungo HOM05D000246 ORTHO05D005907 1.3e-135 486.9 320 73.4
Hund24461 Selenicereus undatus HOM05D000246 ORTHO05D005907 1.7e-135 486.5 320 72.8
FvH4_4g12310 Fragaria vesca HOM05D000246 ORTHO05D005907 2.3e-135 486.1 320 72.8
FAN12G0598 Fragaria x ananassa HOM05D000246 ORTHO05D005907 2.3e-135 486.1 320 72.8
Glyma.18G284200 Glycine max HOM05D000246 ORTHO05D005907 2.3e-135 486.1 320 73.4
Cc03_g10680 Coffea canephora HOM05D000246 ORTHO05D005907 3.0e-135 485.7 316 73.4
Lalb_Chr10g0092081 Lupinus albus HOM05D000246 ORTHO05D005907 3.0e-135 485.7 320 73.1
Nitab4.5_0006519g0040 Nicotiana tabacum HOM05D000246 ORTHO05D005907 3.0e-135 485.7 320 72.2
Nitab4.5_0012487g0010 Nicotiana tabacum HOM05D000246 ORTHO05D005907 3.0e-135 485.7 316 73.4
EL10Ac3g07395 Beta vulgaris HOM05D000246 ORTHO05D005907 3.9e-135 485.3 320 72.2
FAN17G0846 Fragaria x ananassa HOM05D000246 ORTHO05D005907 3.9e-135 485.3 316 73.4
Manes.02G078000 Manihot esculenta HOM05D000246 ORTHO05D005907 3.9e-135 485.3 317 72.6
Gohir.D09G203200 Gossypium hirsutum HOM05D000246 ORTHO05D005907 5.1e-135 485.0 316 73.1
arahy.Tifrunner.gnm1.ann1.13067A Arachis hypogaea HOM05D000246 ORTHO05D005907 6.6e-135 484.6 323 72.1
arahy.Tifrunner.gnm1.ann1.N8MPD0 Arachis hypogaea HOM05D000246 ORTHO05D005907 6.6e-135 484.6 323 72.1
arahy.Tifrunner.gnm1.ann1.P7X33L Arachis hypogaea HOM05D000246 ORTHO05D005907 6.6e-135 484.6 323 72.1
Gorai.006G227100 Gossypium raimondii HOM05D000246 ORTHO05D005907 6.6e-135 484.6 316 73.1
AUR62020934 Chenopodium quinoa HOM05D000246 ORTHO05D005907 8.7e-135 484.2 320 71.6
Ca_07120_v3 Cicer arietinum L. HOM05D000246 ORTHO05D005907 1.5e-134 483.4 320 72.8
Migut.N00444 Erythranthe guttata HOM05D000246 ORTHO05D005907 1.5e-134 483.4 320 73.1
Lsat_1_v5_gn_6_71461 Lactuca sativa HOM05D000246 ORTHO05D005907 1.5e-134 483.4 316 73.4
Psat3g188360 Pisum sativum HOM05D000246 ORTHO05D005907 1.5e-134 483.4 323 72.4
CANSAT78G0915 Cannabis sativa HOM05D000246 ORTHO05D005907 1.9e-134 483.0 323 72.1
Cpa.g.sc53.167 Carica papaya HOM05D000246 ORTHO05D005907 1.9e-134 483.0 316 73.1
FAN07G2572 Fragaria x ananassa HOM05D000246 ORTHO05D005907 1.9e-134 483.0 316 72.8
Aqoxy2G04069 Aquilegia oxysepala HOM05D000246 ORTHO05D005907 2.5e-134 482.6 316 73.1
MSTRG.21977 Avicennia marina HOM05D000246 ORTHO05D005907 2.5e-134 482.6 320 72.8
FAN22G2422 Fragaria x ananassa HOM05D000246 ORTHO05D005907 2.5e-134 482.6 317 73.5
Gohir.A09G209800 Gossypium hirsutum HOM05D000246 ORTHO05D005907 2.5e-134 482.6 316 72.8
Lsat_1_v5_gn_6_32061 Lactuca sativa HOM05D000246 ORTHO05D005907 2.5e-134 482.6 316 73.1
Lalb_Chr25g0284231 Lupinus albus HOM05D000246 ORTHO05D005907 2.5e-134 482.6 320 73.1
Sed0019749 Sechium edule HOM05D000246 ORTHO05D005907 2.5e-134 482.6 320 72.5
ATR1147G030 Amborella trichopoda HOM05D000246 ORTHO05D005907 3.3e-134 482.3 306 75.5
Solyc09g098280.3 Solanum lycopersicum HOM05D000246 ORTHO05D005907 3.3e-134 482.3 316 73.1
PGSC0003DMG400021629 Solanum tuberosum HOM05D000246 ORTHO05D005907 3.3e-134 482.3 316 73.1
Lj1g0023209 Lotus japonicus HOM05D000246 ORTHO05D005907 4.3e-134 481.9 316 73.4
Sed0019335 Sechium edule HOM05D000246 ORTHO05D005907 7.3e-134 481.1 320 71.6
Sopen09g036210 Solanum pennellii HOM05D000246 ORTHO05D005907 7.3e-134 481.1 316 72.8
Medtr7g021870 Medicago truncatula HOM05D000246 ORTHO05D005907 9.6e-134 480.7 324 71.6
Actinidia35924 Actinidia chinensis HOM05D000246 ORTHO05D005907 1.6e-133 479.9 316 73.7
unitig_578.g16351 Utricularia gibba HOM05D000246 ORTHO05D005907 2.8e-133 479.2 320 72.5
Os04g0376500 Oryza sativa ssp. japonica HOM05D000246 ORTHO05D005907 3.6e-133 478.8 323 71.5
Potri.014G147100 Populus trichocarpa HOM05D000246 ORTHO05D005907 3.6e-133 478.8 316 72.5
Potri.002G233500 Populus trichocarpa HOM05D000246 ORTHO05D005907 6.2e-133 478.0 320 71.6
BraA09t41822Z Brassica rapa HOM05D000246 ORTHO05D005907 8.1e-133 477.6 316 72.8
Lj3C238T3 Lonicera japonica HOM05D000246 ORTHO05D005907 1.1e-132 477.2 306 74.5
BcaC07g38630 Brassica carinata HOM05D000246 ORTHO05D005396 1.4e-132 476.9 316 72.5
Sp1g09540 Schrenkiella parvula HOM05D000246 ORTHO05D005907 1.4e-132 476.9 316 72.8
Aa31LG1G4010 Aethionema arabicum HOM05D000246 ORTHO05D005907 1.8e-132 476.5 316 72.5
BcaNung06200 Brassica carinata HOM05D000246 ORTHO05D005907 1.8e-132 476.5 316 72.5
C08p48480 Brassica napus HOM05D000246 ORTHO05D005907 1.8e-132 476.5 316 72.5
BolC8t52387H Brassica oleracea HOM05D000246 ORTHO05D005907 1.8e-132 476.5 316 72.5
BcaC05g24965 Brassica carinata HOM05D000246 ORTHO05D005907 2.4e-132 476.1 316 72.5
A06p07620 Brassica napus HOM05D000246 ORTHO05D005907 2.4e-132 476.1 316 72.5
C05p09210 Brassica napus HOM05D000246 ORTHO05D005907 2.4e-132 476.1 316 72.5
BraA06t23964Z Brassica rapa HOM05D000246 ORTHO05D005907 2.4e-132 476.1 316 72.5
THA.LOC104819306 Tarenaya hassleriana HOM05D000246 ORTHO05D005907 2.4e-132 476.1 323 70.9
BraA08t35292Z Brassica rapa HOM05D000246 ORTHO05D005907 3.1e-132 475.7 316 72.5
Thhalv10008134m.g Eutrema salsugineum HOM05D000246 ORTHO05D005907 3.1e-132 475.7 316 72.5
HPP92_006214 Vanilla planifolia HOM05D000246 ORTHO05D005907 3.1e-132 475.7 320 71.9
THA.LOC104809592 Tarenaya hassleriana HOM05D000246 ORTHO05D005907 4.0e-132 475.3 320 71.6
HanXRQChr10g0290061 Helianthus annuus HOM05D000246 ORTHO05D005907 9.0e-132 474.2 316 72.5
Carub.0001s1038 Capsella rubella HOM05D000246 ORTHO05D005907 1.5e-131 473.4 316 72.2
FAN12G1501 Fragaria x ananassa HOM05D000246 ORTHO05D005907 1.5e-131 473.4 335 69.0
Ciclev10005378m.g Citrus clementina HOM05D000246 ORTHO05D005907 2.0e-131 473.0 316 72.2
QL06p027657 Quercus lobata HOM05D000246 ORTHO05D005907 2.0e-131 473.0 306 74.5
AT1G10840 Arabidopsis thaliana HOM05D000246 ORTHO05D005907 2.6e-131 472.6 316 72.2
BcaC07g38591 Brassica carinata HOM05D000246 ORTHO05D005907 2.6e-131 472.6 316 72.2
BolC8t49032H Brassica oleracea HOM05D000246 ORTHO05D005907 2.6e-131 472.6 316 72.2
A08p33760 Brassica napus HOM05D000246 ORTHO05D005907 3.4e-131 472.2 316 71.5
Zm00001eb420800 Zea mays HOM05D000246 ORTHO05D005907 3.4e-131 472.2 320 70.9
AL1G21780 Arabidopsis lyrata HOM05D000246 ORTHO05D005907 5.8e-131 471.5 316 71.8
CAN.G710.44 Capsicum annuum HOM05D000246 ORTHO05D005907 5.8e-131 471.5 307 73.6
CDE05G2302 Ceratophyllum demersum HOM05D000246 ORTHO05D005907 9.9e-131 470.7 317 70.3
CARHR011060 Cardamine hirsuta HOM05D000246 ORTHO05D005907 1.7e-130 469.9 316 72.2
DCAR_001263 Daucus carota HOM05D000246 ORTHO05D005907 1.7e-130 469.9 303 74.3
A09p64720 Brassica napus HOM05D000246 ORTHO05D005907 6.4e-130 468.0 331 69.2
Rhsim09G0037600 Rhododendron simsii HOM05D000246 ORTHO05D005907 6.4e-130 468.0 335 68.7
SGA_v2.0_scaffold178G39529 Striga asiatica HOM05D000246 ORTHO05D005907 1.1e-129 467.2 307 73.6
Sabra14G0110400 Salix brachista HOM05D000246 ORTHO05D005907 1.6e-128 463.4 302 72.8
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 2.7e-128 462.6 299 74.2
Atru.chr3.1829 Acer truncatum HOM05D000246 ORTHO05D005907 1.0e-127 460.7 306 73.2
CDE05G0298 Ceratophyllum demersum HOM05D000246 ORTHO05D005907 1.0e-127 460.7 317 69.4
SalBow6G1195 Salvia bowleyana HOM05D000246 ORTHO05D005907 1.8e-127 459.9 362 64.1
Dinv44209 Davidia involucrata HOM05D000246 ORTHO05D005907 2.9e-122 442.6 320 68.1
Duzib268G0303 Durio zibethinus HOM05D000246 ORTHO05D005907 8.4e-122 441.0 320 68.4
Nitab4.5_0001526g0070 Nicotiana tabacum HOM05D000246 ORTHO05D005907 3.5e-120 435.6 316 67.7
C08p13990 Brassica napus HOM05D000246 ORTHO05D005907 4.0e-116 422.2 302 69.2
PRCOL_00002009 Prasinoderma coloniale HOM05D000246 ORTHO05D005907 6.9e-116 421.4 324 62.7
vmacro00560 Vaccinium macrocarpon HOM05D000246 ORTHO05D005907 9.0e-116 421.0 400 56.2
Oeu034474.1 Olea europaea HOM05D000246 ORTHO05D005907 4.5e-115 418.7 358 60.6
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 7.6e-115 417.9 280 71.8
CSS0028322 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D005907 1.3e-111 407.1 263 73.8
AagrBONN_evm.TU.Sc2ySwM_344.209 Anthoceros agrestis HOM05D000246 ORTHO05D005907 2.6e-107 392.9 233 79.0
Hma1.2p1_1025F.1_g249250 Hydrangea macrophylla HOM05D000246 ORTHO05D005907 1.4e-105 387.1 254 72.8
Hma1.2p1_3184F.1_g333715 Hydrangea macrophylla HOM05D000246 ORTHO05D005907 1.4e-105 387.1 254 72.8
TAR365G1195 Trochodendron aralioides HOM05D000246 ORTHO05D005907 4.2e-105 385.6 254 72.0
Nn7g38282 Nelumbo nucifera HOM05D000246 ORTHO05D005907 3.6e-104 382.5 321 61.1
Ciclev10033395m.g Citrus clementina HOM05D000246 ORTHO05D005907 7.9e-104 381.3 320 60.0
MCO05G711 Micromonas commoda HOM05D000246 ORTHO05D005907 7.4e-102 374.8 325 57.2
COL.COLO4_08082 Corchorus olitorius HOM05D000246 ORTHO05D005907 1.7e-101 373.6 263 68.8
Duzib151G0358 Durio zibethinus HOM05D000246 ORTHO05D005907 1.8e-100 370.2 320 59.7
ECA238G0367 Erigeron canadensis HOM05D000246 ORTHO05D005907 1.5e-99 367.1 237 74.3
Zm00001eb420740 Zea mays HOM05D000246 ORTHO05D005907 1.5e-99 367.1 247 70.9
Cre16.g676314 Chlamydomonas reinhardtii HOM05D000246 ORTHO05D005907 4.5e-99 365.5 316 54.7
AUR62018486 Chenopodium quinoa HOM05D000246 ORTHO05D005907 2.0e-91 340.1 247 66.8
MELO3C017707.2 Cucumis melo HOM05D000246 ORTHO05D005907 3.5e-83 312.8 212 70.3
SHI25257 Sapria himalayana HOM05D000246 ORTHO05D005907 2.9e-45 186.8 108 82.4
Pp3c25_2670 Physcomitrium patens HOM05D000246 ORTHO05D005907 4.1e-44 183.0 158 62.0
Actinidia32962 Actinidia chinensis HOM05D000246 ORTHO05D052905 1.1e-28 131.7 180 47.2
AagrBONN_evm.TU.Sc2ySwM_362.466 Anthoceros agrestis HOM05D000246 ORTHO05D075151 1.5e-22 111.3 74 71.6
Dinv10886 Davidia involucrata HOM05D000246 ORTHO05D005907 1.5e-22 111.3 76 71.1
Dinv10847 Davidia involucrata HOM05D000246 ORTHO05D005907 1.1e-20 105.1 75 69.3
PSO675G6425 Papaver somniferum HOM05D000246 ORTHO05D005907 7.1e-20 102.4 79 58.2
COL.COLO4_30406 Corchorus olitorius HOM05D000246 ORTHO05D005907 4.8e-16 89.7 77 59.7
FAN20G1849 Fragaria x ananassa HOM05D000246 ORTHO05D209582 9.3e-12 75.5 52 67.3
Medtr7g064210 Medicago truncatula HOM05D000076 ORTHO05D036729 1.5e-09 68.2 100 42.0
VMungo0331G1529 Vigna mungo HOM05D000246 ORTHO05D436255 3.3e-09 67.0 39 79.5
Medtr2g022940 Medicago truncatula HOM05D000871 ORTHO05D036729 6.2e-08 62.8 55 56.4
AagrBONN_evm.TU.Sc2ySwM_362.465 Anthoceros agrestis HOM05D000246 ORTHO05D076687 8.1e-08 62.4 102 41.2


User provided reference genes

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