Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23274 Chara braunii HOM05D004860 ORTHO05D006366 6.3e-85 317.4 158 100.0
AUR62030079 Chenopodium quinoa HOM05D004860 ORTHO05D006366 3.2e-41 172.2 129 61.2
MSTRG.24756 Avicennia marina HOM05D004860 ORTHO05D006366 9.5e-41 170.6 129 61.2
Zm00001eb303280 Zea mays HOM05D004860 ORTHO05D006366 9.5e-41 170.6 129 62.0
Actinidia40192 Actinidia chinensis HOM05D004860 ORTHO05D006366 1.6e-40 169.9 129 62.0
Rhsim04G0207200 Rhododendron simsii HOM05D004860 ORTHO05D006366 1.6e-40 169.9 129 61.2
Glyma.07G256800 Glycine max HOM05D004860 ORTHO05D006366 2.1e-40 169.5 129 60.5
Os07g0211800 Oryza sativa ssp. japonica HOM05D004860 ORTHO05D006366 2.7e-40 169.1 129 61.2
Cc03_g03100 Coffea canephora HOM05D004860 ORTHO05D006366 3.6e-40 168.7 129 58.9
Glyma.17G017300 Glycine max HOM05D004860 ORTHO05D006366 3.6e-40 168.7 129 60.5
MD16G1183500 Malus domestica HOM05D004860 ORTHO05D006366 3.6e-40 168.7 129 61.2
Medtr4g117310 Medicago truncatula HOM05D004860 ORTHO05D006366 3.6e-40 168.7 129 59.7
GSVIVG01017886001 Vitis vinifera HOM05D004860 ORTHO05D006366 3.6e-40 168.7 129 60.5
CDE02G3435 Ceratophyllum demersum HOM05D004860 ORTHO05D006366 4.7e-40 168.3 129 61.2
Solyc01g080140.3 Solanum lycopersicum HOM05D004860 ORTHO05D006366 4.7e-40 168.3 129 60.5
Sopen01g031920 Solanum pennellii HOM05D004860 ORTHO05D006366 4.7e-40 168.3 129 60.5
AagrBONN_evm.TU.Sc2ySwM_117.2400 Anthoceros agrestis HOM05D004860 ORTHO05D006366 6.1e-40 167.9 129 62.0
PSO170G1688 Papaver somniferum HOM05D004860 ORTHO05D006366 6.1e-40 167.9 129 61.2
Atru.chr4.2574 Acer truncatum HOM05D004860 ORTHO05D006366 8.0e-40 167.5 129 60.5
Lj4g0005512 Lotus japonicus HOM05D004860 ORTHO05D006366 8.0e-40 167.5 129 58.9
Nn4g26191 Nelumbo nucifera HOM05D004860 ORTHO05D006366 8.0e-40 167.5 129 61.2
PSO407G0112 Papaver somniferum HOM05D004860 ORTHO05D006366 8.0e-40 167.5 129 61.2
Prupe.1G151200 Prunus persica HOM05D004860 ORTHO05D006366 8.0e-40 167.5 129 59.7
QL06p004255 Quercus lobata HOM05D004860 ORTHO05D006366 8.0e-40 167.5 129 60.5
TPR.G20138 Trifolium pratense HOM05D004860 ORTHO05D006366 8.0e-40 167.5 129 59.7
Dinv38393 Davidia involucrata HOM05D001530 ORTHO05D004168 1.0e-39 167.2 129 60.5
Potri.008G202300 Populus trichocarpa HOM05D004860 ORTHO05D006366 1.0e-39 167.2 129 59.7
Sabra08G0159200 Salix brachista HOM05D004860 ORTHO05D006366 1.0e-39 167.2 129 59.7
AUR62038223 Chenopodium quinoa HOM05D004860 ORTHO05D006366 1.4e-39 166.8 129 59.7
Psat4g031440 Pisum sativum HOM05D004860 ORTHO05D006366 1.4e-39 166.8 129 58.9
Cpa.g.sc16.26 Carica papaya HOM05D004860 ORTHO05D006366 2.3e-39 166.0 129 61.2
Ca_21591_v3 Cicer arietinum L. HOM05D004860 ORTHO05D006366 2.3e-39 166.0 129 58.1
vmacro08274 Vaccinium macrocarpon HOM05D004860 ORTHO05D006366 2.3e-39 166.0 129 59.7
Aqoxy2G03261 Aquilegia oxysepala HOM05D004860 ORTHO05D006366 4.0e-39 165.2 128 59.4
CSS0038220 Camellia sinensis var. sinensis HOM05D004860 ORTHO05D006366 4.0e-39 165.2 129 59.7
TAR636G2819 Trochodendron aralioides HOM05D004860 ORTHO05D006366 4.0e-39 165.2 129 59.7
Ah.07g203980 Amaranthus hybridus HOM05D004860 ORTHO05D006366 5.2e-39 164.9 129 59.7
ECA240G4413 Erigeron canadensis HOM05D004860 ORTHO05D006366 5.2e-39 164.9 129 58.1
Lj3C761T9 Lonicera japonica HOM05D004860 ORTHO05D006366 5.2e-39 164.9 129 58.1
MD13G1182900 Malus domestica HOM05D004860 ORTHO05D006366 5.2e-39 164.9 129 60.5
arahy.Tifrunner.gnm1.ann1.K193BP Arachis hypogaea HOM05D004860 ORTHO05D006366 6.8e-39 164.5 129 58.9
arahy.Tifrunner.gnm1.ann1.PDW3QZ Arachis hypogaea HOM05D004860 ORTHO05D006366 6.8e-39 164.5 129 58.9
MELO3C006570.2 Cucumis melo HOM05D004860 ORTHO05D006366 6.8e-39 164.5 129 60.5
Oeu029304.1 Olea europaea HOM05D004860 ORTHO05D006366 8.8e-39 164.1 129 59.7
Eucgr.D02658 Eucalyptus grandis HOM05D004860 ORTHO05D006366 1.2e-38 163.7 129 60.5
Phvul.003G093000 Phaseolus vulgaris HOM05D004860 ORTHO05D006366 1.2e-38 163.7 129 58.9
Ah.13g074180 Amaranthus hybridus HOM05D004860 ORTHO05D006366 1.5e-38 163.3 129 58.1
Hund12197 Selenicereus undatus HOM05D004860 ORTHO05D000105 1.5e-38 163.3 129 58.9
COL.COLO4_21645 Corchorus olitorius HOM05D004860 ORTHO05D006366 2.0e-38 162.9 129 59.7
FAN22G2324 Fragaria x ananassa HOM05D004860 ORTHO05D006366 2.0e-38 162.9 129 59.7
Lj6A565G28 Lonicera japonica HOM05D004860 ORTHO05D006366 2.6e-38 162.5 129 58.9
Pp3c4_4720 Physcomitrium patens HOM05D004860 ORTHO05D006366 2.6e-38 162.5 129 61.2
ClCG05G005460 Citrullus lanatus HOM05D004860 ORTHO05D006366 3.4e-38 162.2 129 59.7
Lalb_Chr07g0177321 Lupinus albus HOM05D004860 ORTHO05D006366 3.4e-38 162.2 129 57.4
Nitab4.5_0001247g0010 Nicotiana tabacum HOM05D004860 ORTHO05D006366 3.4e-38 162.2 126 59.5
TWI73G0632 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 4.4e-38 161.8 129 59.7
CsaV3_3G013760 Cucumis sativus L. HOM05D004860 ORTHO05D006366 5.7e-38 161.4 129 58.9
Migut.G00288 Erythranthe guttata HOM05D004860 ORTHO05D006366 5.7e-38 161.4 129 58.9
FvH4_4g14470 Fragaria vesca HOM05D004860 ORTHO05D006366 5.7e-38 161.4 129 59.7
RcHm_v2.0_Chr4g0418381 Rosa chinensis HOM05D004860 ORTHO05D006366 5.7e-38 161.4 129 60.5
Thecc.04G221400 Theobroma cacao HOM05D004860 ORTHO05D006366 5.7e-38 161.4 129 58.9
FAN07G1456 Fragaria x ananassa HOM05D004860 ORTHO05D006366 7.5e-38 161.0 129 59.7
PGR031G2771 Punica granatum HOM05D004860 ORTHO05D006366 7.5e-38 161.0 129 59.7
TAR365G0160 Trochodendron aralioides HOM05D004860 ORTHO05D006366 7.5e-38 161.0 129 58.9
HanXRQChr09g0248101 Helianthus annuus HOM05D004860 ORTHO05D006366 9.8e-38 160.6 129 57.4
Manes.15G022900 Manihot esculenta HOM05D004860 ORTHO05D006366 9.8e-38 160.6 129 58.9
CANSAT78G2493 Cannabis sativa HOM05D004860 ORTHO05D006366 1.7e-37 159.8 129 58.9
CiPaw.02G092200 Carya illinoinensis HOM05D004860 ORTHO05D006366 2.2e-37 159.5 129 58.1
SEGI_28969 Sequoiadendron giganteum HOM05D004860 ORTHO05D006366 2.2e-37 159.5 129 58.1
THA.LOC104822311 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 2.2e-37 159.5 129 58.1
Migut.N00151 Erythranthe guttata HOM05D004860 ORTHO05D006366 2.8e-37 159.1 129 57.4
Sed0000368 Sechium edule HOM05D004860 ORTHO05D006366 3.7e-37 158.7 129 59.7
A03p09270 Brassica napus HOM05D004860 ORTHO05D006366 4.9e-37 158.3 129 58.1
BraA03t10247Z Brassica rapa HOM05D004860 ORTHO05D006366 4.9e-37 158.3 129 58.1
Duzib268G1873 Durio zibethinus HOM05D004860 ORTHO05D006366 4.9e-37 158.3 129 58.9
FAN12G3962 Fragaria x ananassa HOM05D004860 ORTHO05D006366 4.9e-37 158.3 129 58.9
Mapoly0095s0018 Marchantia polymorpha HOM05D004860 ORTHO05D006366 4.9e-37 158.3 129 60.5
SalBow5G0733 Salvia bowleyana HOM05D004860 ORTHO05D006366 4.9e-37 158.3 129 57.4
SalBow5G4413 Salvia bowleyana HOM05D004860 ORTHO05D006366 4.9e-37 158.3 129 57.4
Ciclev10005293m.g Citrus clementina HOM05D004860 ORTHO05D006366 6.3e-37 157.9 129 58.1
BcaC04g18624 Brassica carinata HOM05D004860 ORTHO05D006366 8.3e-37 157.5 129 57.4
A10p20640 Brassica napus HOM05D004860 ORTHO05D006366 8.3e-37 157.5 129 57.4
C03p10800 Brassica napus HOM05D004860 ORTHO05D006366 8.3e-37 157.5 129 57.4
C09p57430 Brassica napus HOM05D004860 ORTHO05D006366 8.3e-37 157.5 129 57.4
BolC3t13554H Brassica oleracea HOM05D004860 ORTHO05D006366 8.3e-37 157.5 129 57.4
BolC9t58612H Brassica oleracea HOM05D004860 ORTHO05D006366 8.3e-37 157.5 129 57.4
BraA10t44127Z Brassica rapa HOM05D004860 ORTHO05D006366 8.3e-37 157.5 129 57.4
Sp6g25330 Schrenkiella parvula HOM05D004860 ORTHO05D006366 8.3e-37 157.5 129 58.1
THA.LOC104818790 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 8.3e-37 157.5 137 56.9
AL6G30430 Arabidopsis lyrata HOM05D004860 ORTHO05D006366 1.1e-36 157.1 129 57.4
Gohir.A05G316600 Gossypium hirsutum HOM05D004860 ORTHO05D006366 1.4e-36 156.8 129 58.9
BcaB01g04878 Brassica carinata HOM05D004860 ORTHO05D006366 1.8e-36 156.4 129 57.4
Thhalv10013904m.g Eutrema salsugineum HOM05D004860 ORTHO05D006366 1.8e-36 156.4 129 57.4
AT5G19050 Arabidopsis thaliana HOM05D004860 ORTHO05D006366 2.4e-36 156.0 129 57.4
Carub.0006s1737 Capsella rubella HOM05D004860 ORTHO05D006366 2.4e-36 156.0 129 57.4
Nn1g02160 Nelumbo nucifera HOM05D004860 ORTHO05D006366 2.4e-36 156.0 128 57.8
SMO119G0283 Selaginella moellendorffii HOM05D004860 ORTHO05D006366 3.1e-36 155.6 129 59.7
BcaB01g05289 Brassica carinata HOM05D004860 ORTHO05D006366 4.1e-36 155.2 129 56.6
Aa31LG11G10670 Aethionema arabicum HOM05D004860 ORTHO05D006366 7.0e-36 154.5 129 55.8
BcaB08g36622 Brassica carinata HOM05D004860 ORTHO05D006366 7.0e-36 154.5 129 55.8
Gorai.009G340700 Gossypium raimondii HOM05D004860 ORTHO05D006366 9.2e-36 154.1 129 58.1
Cfa015580 Carpinus fangiana HOM05D004860 ORTHO05D006366 1.2e-35 153.7 130 56.2
Oeu017197.2 Olea europaea HOM05D004860 ORTHO05D006366 3.5e-35 152.1 147 51.7
CARHR193940 Cardamine hirsuta HOM05D004860 ORTHO05D006366 5.9e-35 151.4 129 56.6
EL10Ac3g06352 Beta vulgaris HOM05D004860 ORTHO05D006366 1.7e-34 149.8 166 47.0
Duzib212G0960 Durio zibethinus HOM05D004860 ORTHO05D006366 2.9e-34 149.1 135 54.8
MBI17_g12009_MAGBIO Magnolia biondii HOM05D004860 ORTHO05D006366 6.6e-34 147.9 129 55.0
unitig_8.g2879 Utricularia gibba HOM05D004860 ORTHO05D006366 1.1e-33 147.1 129 55.8
Lsat_1_v5_gn_7_67361 Lactuca sativa HOM05D004860 ORTHO05D006366 5.6e-33 144.8 115 60.0
Peaxi162Scf01766g00011 Petunia axillaris HOM05D004860 ORTHO05D006366 3.0e-31 139.0 115 57.4
CAN.G183.30 Capsicum annuum HOM05D004860 ORTHO05D006366 4.0e-31 138.7 112 58.9
CiPaw.01G159800 Carya illinoinensis HOM05D004860 ORTHO05D006366 6.8e-31 137.9 108 59.3
Manes.03G184900 Manihot esculenta HOM05D004860 ORTHO05D006366 1.7e-29 133.3 127 53.5
Haze_00965 Corylus avellana HOM05D004860 ORTHO05D006366 4.9e-29 131.7 109 54.1
TWI53G0789 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 6.4e-29 131.3 111 56.8
ATR0626G115 Amborella trichopoda HOM05D004860 ORTHO05D006366 8.3e-29 131.0 108 58.3
Actinidia12990 Actinidia chinensis HOM05D004860 ORTHO05D006366 2.4e-28 129.4 129 52.7
SGA_v2.0_scaffold166G38376 Striga asiatica HOM05D004860 ORTHO05D006366 3.2e-28 129.0 108 58.3
Gohir.D05G318100 Gossypium hirsutum HOM05D004860 ORTHO05D006366 9.2e-28 127.5 131 50.4
SHI00370 Sapria himalayana HOM05D004860 ORTHO05D000023 1.2e-27 127.1 108 56.5
Dinv44480 Davidia involucrata HOM05D001530 ORTHO05D004168 3.0e-26 122.5 114 52.6
Eucgr.B01143 Eucalyptus grandis HOM05D004860 ORTHO05D006366 4.4e-22 108.6 104 50.0
Hund22791 Selenicereus undatus HOM05D004860 ORTHO05D006366 3.7e-21 105.5 83 57.8
FAN17G0307 Fragaria x ananassa HOM05D004860 ORTHO05D006366 4.9e-21 105.1 89 53.9
SalBow2G3077 Salvia bowleyana HOM05D004860 ORTHO05D006366 3.2e-20 102.4 129 44.2
PRCOL_00003006 Prasinoderma coloniale HOM05D004860 ORTHO05D006366 6.0e-19 98.2 124 46.8
Sc13g0003950 Simmondsia chinensis HOM05D004860 ORTHO05D006366 5.6e-17 91.7 71 60.6
VMungo1215G0515 Vigna mungo HOM05D004860 ORTHO05D006366 4.7e-16 88.6 71 59.2
VMungo1215G0712 Vigna mungo HOM05D004860 ORTHO05D006366 2.0e-14 83.2 59 59.3
Cc09_g08330 Coffea canephora HOM05D004860 ORTHO05D006366 1.9e-12 76.6 63 50.8
Cc02_g31730 Coffea canephora HOM05D004860 ORTHO05D006366 1.2e-11 73.9 59 50.8
HPP92_027343 Vanilla planifolia HOM05D004860 ORTHO05D006366 2.5e-09 66.2 62 51.6
Cre06.g283034 Chlamydomonas reinhardtii HOM05D004860 ORTHO05D006366 1.2e-08 63.9 111 36.0
Cc01_g03740 Coffea canephora HOM05D004860 ORTHO05D006366 2.8e-08 62.8 68 44.1
Mapoly0174s0021 Marchantia polymorpha HOM05D004860 ORTHO05D006366 2.6e-06 56.2 37 67.6


User provided reference genes

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